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Spg036976 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036976
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon 17.6
Genome locationscaffold5:25617040..25621040
RNA-Seq ExpressionSpg036976
SyntenySpg036976
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022159345.1 uncharacterized protein LOC111025764 [Momordica charantia]9.4e-1671.83Show/hide
Query:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEP
        MMKE+MARTDA IQS  ASMR  E Q+GQLANELK RPQG  P  TE P+REGKEQ KAVTLRSG   +EP
Subjt:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEP

XP_030494802.1 uncharacterized protein LOC115710583 [Cannabis sativa]2.7e-1556.18Show/hide
Query:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEE------PRKTQDIDKNGDK
        +M+++MA+ DA IQS  AS++ LE+Q+GQLAN+LK RPQG LPSDTE+PRR+GKE  KAVTLRSGK +E        +++  I K G+K
Subjt:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEE------PRKTQDIDKNGDK

XP_030494874.1 uncharacterized protein LOC115710657 [Cannabis sativa]1.2e-1546.21Show/hide
Query:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDIDKNGD-KNVVAEKELESGQAQAN
        +M+++MA+ DA IQS  AS+R LELQ+G LANELKARPQG LPSDTE+PRR+GKEQ  A+ LRSGK L+     ++I  +G+  ++  +K+L +  AQ  
Subjt:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDIDKNGD-KNVVAEKELESGQAQAN

Query:  SIATKVNFR--RILYATKIPISLQPQRRNLPF
        +  + V+ +  R L     P+   P +  LPF
Subjt:  SIATKVNFR--RILYATKIPISLQPQRRNLPF

XP_030503898.1 uncharacterized protein LOC115719117 [Cannabis sativa]1.6e-1545.04Show/hide
Query:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDIDKNGDKNVVAEKELESGQAQANS
        +M+++MA+ DA IQS  AS+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR+GKE  KAVTLRSGK +E              NV A+     G  + +S
Subjt:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDIDKNGDKNVVAEKELESGQAQANS

Query:  IATKVNFRRILYATKIPISLQPQRRNLPFCR
        I  +   ++    +   I  + QR N   CR
Subjt:  IATKVNFRRILYATKIPISLQPQRRNLPFCR

XP_030507648.1 uncharacterized protein LOC115722545 [Cannabis sativa]1.6e-1568.12Show/hide
Query:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLE
        +M+++MA+ DA IQS  AS+R LE+Q+GQLAN+LK RPQG LPSDTE+PRR+GKE  KA+TLRSGK LE
Subjt:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLE

TrEMBL top hitse value%identityAlignment
A0A6J1DW02 uncharacterized protein LOC1110248972.5e-1469.01Show/hide
Query:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEP
        MMKE+MARTDA IQS  ASMR    Q+G LANELK RPQG  P  TE PRREGKEQ KAVTLRSG   + P
Subjt:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEP

A0A6J1DWK1 uncharacterized protein LOC1110250534.7e-1364.71Show/hide
Query:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPL
        +MK++MA  DA +QS  AS+R LELQVGQLA +LK+RP G LPSDTE P+R+ KEQ  A+TLRSGK L
Subjt:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPL

A0A6J1DYG0 uncharacterized protein LOC1110257644.6e-1671.83Show/hide
Query:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEP
        MMKE+MARTDA IQS  ASMR  E Q+GQLANELK RPQG  P  TE P+REGKEQ KAVTLRSG   +EP
Subjt:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEP

A0A6J1GJ68 uncharacterized protein LOC1114543441.2e-1363.24Show/hide
Query:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPL
        ++KE+MA+ D  IQS QAS++ LE+QVGQLA EL+ RP GKLP+DTE P+REGKEQ +A+ LRSGK +
Subjt:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPL

A0A6J1H7K8 uncharacterized protein LOC1114611679.5e-1443.41Show/hide
Query:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPL------------EEPRKTQDIDKNGDKNVVAE
        ++KE+MA+ D  IQS QAS+R LE+QVGQLANEL+ RP GKLPSDTE P+REG EQ +A+ LRSGK +               ++T D  +  ++ VV E
Subjt:  MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPL------------EEPRKTQDIDKNGDKNVVAE

Query:  KELESGQAQANSIATKVNFRRILYATKIP
           E  +  A ++  K + R      K P
Subjt:  KELESGQAQANSIATKVNFRRILYATKIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAAGAATTTATGGCTCGTACAGATGCCGCAATTCAAAGTAATCAAGCTTCTATGAGAGCCCTTGAATTGCAAGTGGGTCAGCTAGCTAATGAACTGAAGGCAAG
ACCTCAAGGGAAACTACCCTCAGATACTGAACACCCTCGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTAACTCTTAGGAGTGGTAAGCCACTAGAGGAGCCTAGAAAGA
CCCAGGATATAGATAAAAATGGTGATAAAAACGTTGTTGCTGAGAAAGAGTTGGAGTCTGGTCAAGCCCAAGCGAATAGCATTGCGACGAAAGTTAACTTTCGTCGCATT
CTATATGCGACGAAAATACCTATTTCGTTGCAACCTCAGCGACGGAACCTACCGTTTTGTCGCAATCATAAAAATTTCCCGCCCCACACGAAAATATCAGCCTACGCCTG
TGTCGAAATGGGTTTTTTGGTCGCAAGCTTAGCGTCGAAATCAGCCTACGCGTCGCAAGGTTCGCAACTTCAGCGTCGAAATCACCCGATGTGTCGCACGCTTAGCGTCG
AATATGGTCGTTTCGTCGCAGCCCTTGACAAGACAACCCCTCGTGCAGAGCACTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGAAAGAATTTATGGCTCGTACAGATGCCGCAATTCAAAGTAATCAAGCTTCTATGAGAGCCCTTGAATTGCAAGTGGGTCAGCTAGCTAATGAACTGAAGGCAAG
ACCTCAAGGGAAACTACCCTCAGATACTGAACACCCTCGAAGGGAAGGTAAGGAGCAGGTAAAGGCAGTAACTCTTAGGAGTGGTAAGCCACTAGAGGAGCCTAGAAAGA
CCCAGGATATAGATAAAAATGGTGATAAAAACGTTGTTGCTGAGAAAGAGTTGGAGTCTGGTCAAGCCCAAGCGAATAGCATTGCGACGAAAGTTAACTTTCGTCGCATT
CTATATGCGACGAAAATACCTATTTCGTTGCAACCTCAGCGACGGAACCTACCGTTTTGTCGCAATCATAAAAATTTCCCGCCCCACACGAAAATATCAGCCTACGCCTG
TGTCGAAATGGGTTTTTTGGTCGCAAGCTTAGCGTCGAAATCAGCCTACGCGTCGCAAGGTTCGCAACTTCAGCGTCGAAATCACCCGATGTGTCGCACGCTTAGCGTCG
AATATGGTCGTTTCGTCGCAGCCCTTGACAAGACAACCCCTCGTGCAGAGCACTAG
Protein sequenceShow/hide protein sequence
MMKEFMARTDAAIQSNQASMRALELQVGQLANELKARPQGKLPSDTEHPRREGKEQVKAVTLRSGKPLEEPRKTQDIDKNGDKNVVAEKELESGQAQANSIATKVNFRRI
LYATKIPISLQPQRRNLPFCRNHKNFPPHTKISAYACVEMGFLVASLASKSAYASQGSQLQRRNHPMCRTLSVEYGRFVAALDKTTPRAEH