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Spg036994 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg036994
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationscaffold5:27885118..27891457
RNA-Seq ExpressionSpg036994
SyntenySpg036994
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0005488 - binding (molecular function)
GO:0008233 - peptidase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041962.1 reverse transcriptase [Cucumis melo var. makuwa]3.5e-1962.22Show/hide
Query:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM
        +LYL EVPDS+ FLESHLEEIA K D IDA++GR++G+PI++LL RV+ LE    R  S ERGDSS GSVA +EE V  LDSSQK +  M
Subjt:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM

KAA0045293.1 uncharacterized protein E6C27_scaffold316G00510 [Cucumis melo var. makuwa]3.5e-1962.89Show/hide
Query:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLMQPQNVCS
        +LYL EVPDS+RFLES LE+IA K D IDAV+GR++G+ I+ELL RV+ LEE   R  S ERGDSS GSVA +EE V  LDSSQK  TL++  NV S
Subjt:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLMQPQNVCS

KAA0057471.1 uncharacterized protein E6C27_scaffold280G003520 [Cucumis melo var. makuwa]5.9e-1961.11Show/hide
Query:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM
        +LYL EVPDSVRFLES L+EIA K DTI+AV+GR++G+PI+ELL RV+ LE    R   +E GDSS   VA MEECV+ LD+SQK +  M
Subjt:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM

KAA0066681.1 uncharacterized protein E6C27_scaffold271G00090 [Cucumis melo var. makuwa]2.0e-1964.44Show/hide
Query:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM
        +LYL EVPDS+RFLES LEEIA K D IDAV+GR++G+PI+ELL RV+ LE    R  S ERGDSS GSVA +EE V  LDSSQK +  M
Subjt:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM

TYK00114.1 senescence-specific cysteine protease sag39 [Cucumis melo var. makuwa]3.5e-1961.11Show/hide
Query:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM
        +LYL EVPD + FLES LEEI  K DTIDAV GR++G+PI+ELL RV+ LE    R  ++E GDSS+G VA MEECV+ LDSSQK +  M
Subjt:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM

TrEMBL top hitse value%identityAlignment
A0A5A7TEV3 Reverse transcriptase1.7e-1962.22Show/hide
Query:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM
        +LYL EVPDS+ FLESHLEEIA K D IDA++GR++G+PI++LL RV+ LE    R  S ERGDSS GSVA +EE V  LDSSQK +  M
Subjt:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM

A0A5A7TP22 Uncharacterized protein1.7e-1962.89Show/hide
Query:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLMQPQNVCS
        +LYL EVPDS+RFLES LE+IA K D IDAV+GR++G+ I+ELL RV+ LEE   R  S ERGDSS GSVA +EE V  LDSSQK  TL++  NV S
Subjt:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLMQPQNVCS

A0A5A7UVD7 Uncharacterized protein2.9e-1961.11Show/hide
Query:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM
        +LYL EVPDSVRFLES L+EIA K DTI+AV+GR++G+PI+ELL RV+ LE    R   +E GDSS   VA MEECV+ LD+SQK +  M
Subjt:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM

A0A5D3BLG1 Senescence-specific cysteine protease sag391.7e-1961.11Show/hide
Query:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM
        +LYL EVPD + FLES LEEI  K DTIDAV GR++G+PI+ELL RV+ LE    R  ++E GDSS+G VA MEECV+ LDSSQK +  M
Subjt:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM

A0A5D3DVV7 Retrotrans_gag domain-containing protein9.8e-2064.44Show/hide
Query:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM
        +LYL EVPDS+RFLES LEEIA K D IDAV+GR++G+PI+ELL RV+ LE    R  S ERGDSS GSVA +EE V  LDSSQK +  M
Subjt:  VLYLREVPDSVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTACACATATGTCAGTAGAAAGCAGCATGTTCAAAGGTATATGTCAATTTTCTGCTGTATTTTCTCTAAGTAAGTTGTCAACCTCAGCTCAGCTTGCTGATCGCAT
AGCTACTTGGGATGTTCCAAGAATCGCTGATGACGGAAGAGATTGCTTGCTTGAAAATTTCTTGAACTATATTGAGATCCTCAACGAGAAGAAAGATGAGATTGATGTTG
AGAATGAGGATAATGGTTTGGATCACGAAAAGAATGTATTGCGAAAACGCATGGGCTCTAAGGGTTTCCTCAAGCTCTTGAGTGTGCTCTACTTGAGAGAAGTCCCGGAT
TCAGTTCGGTTCTTGGAATCTCACCTGGAAGAGATTGCAACCAAGAAGGACACAATTGATGCGGTATCTGGCCGCTTGGATGGAATGCCCATCAAAGAGTTATTAATAAG
GGTTGAGAACCTCGAAGAAAAAGCTACAAGACCTAGTAGCTTCGAGCGTGGGGACAGCTCGATGGGCTCTGTCGCCCAGATGGAGGAGTGTGTCGATGGCTTAGACAGCT
CCCAAAAAGCAATAACGCTTATGCAGCCGCAGAACGTCTGTTCGATCTTAGCAATGACCAACCCCAGGATCAGAAGCAAAACCAAGCCTCCTCGAGTGGGGGAAATAGAC
CAATGCGATCCAACTCTCCCAAAAGTGGGGGAGGAGACAAAAGTGGAGGAAGTAACCGTAACCCCTCCCAACCAAGAGGCGGGAGTTCATATCGAGGCCCGAATCAGCAG
TCCTATAATGACAAACCCCTTTATTGCTATATCTGTAAAGGGCCACATCGAGCATACCAGTGCCCTAGTCGAACTGCATTCAATGCCTTTCAAGCTTCATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTTACACATATGTCAGTAGAAAGCAGCATGTTCAAAGGTATATGTCAATTTTCTGCTGTATTTTCTCTAAGTAAGTTGTCAACCTCAGCTCAGCTTGCTGATCGCAT
AGCTACTTGGGATGTTCCAAGAATCGCTGATGACGGAAGAGATTGCTTGCTTGAAAATTTCTTGAACTATATTGAGATCCTCAACGAGAAGAAAGATGAGATTGATGTTG
AGAATGAGGATAATGGTTTGGATCACGAAAAGAATGTATTGCGAAAACGCATGGGCTCTAAGGGTTTCCTCAAGCTCTTGAGTGTGCTCTACTTGAGAGAAGTCCCGGAT
TCAGTTCGGTTCTTGGAATCTCACCTGGAAGAGATTGCAACCAAGAAGGACACAATTGATGCGGTATCTGGCCGCTTGGATGGAATGCCCATCAAAGAGTTATTAATAAG
GGTTGAGAACCTCGAAGAAAAAGCTACAAGACCTAGTAGCTTCGAGCGTGGGGACAGCTCGATGGGCTCTGTCGCCCAGATGGAGGAGTGTGTCGATGGCTTAGACAGCT
CCCAAAAAGCAATAACGCTTATGCAGCCGCAGAACGTCTGTTCGATCTTAGCAATGACCAACCCCAGGATCAGAAGCAAAACCAAGCCTCCTCGAGTGGGGGAAATAGAC
CAATGCGATCCAACTCTCCCAAAAGTGGGGGAGGAGACAAAAGTGGAGGAAGTAACCGTAACCCCTCCCAACCAAGAGGCGGGAGTTCATATCGAGGCCCGAATCAGCAG
TCCTATAATGACAAACCCCTTTATTGCTATATCTGTAAAGGGCCACATCGAGCATACCAGTGCCCTAGTCGAACTGCATTCAATGCCTTTCAAGCTTCATTAA
Protein sequenceShow/hide protein sequence
MFTHMSVESSMFKGICQFSAVFSLSKLSTSAQLADRIATWDVPRIADDGRDCLLENFLNYIEILNEKKDEIDVENEDNGLDHEKNVLRKRMGSKGFLKLLSVLYLREVPD
SVRFLESHLEEIATKKDTIDAVSGRLDGMPIKELLIRVENLEEKATRPSSFERGDSSMGSVAQMEECVDGLDSSQKAITLMQPQNVCSILAMTNPRIRSKTKPPRVGEID
QCDPTLPKVGEETKVEEVTVTPPNQEAGVHIEARISSPIMTNPFIAISVKGHIEHTSALVELHSMPFKLH