; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037000 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037000
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold6:29202667..29208059
RNA-Seq ExpressionSpg037000
SyntenySpg037000
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR017956 - AT hook, DNA-binding motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTTCTTTAAATCATATCCTAATGCGGTGGTGCTGAGAGTTTTTAAAGAAGTTGAGATGTGGAACTCACCTGACCTTCACGTGACATCAACGGTAAATTTATTTGA
AGGGGAAAGACATGGCCTGCAAAATAAGAGAAAACTGAGCATCGGTGTGGTGCTTGCCACACCGACTCCGATGCTTAAGTCAGTTGGGAGATCTTACATAAGCTCTTCTG
AGTTCAAATATTCCAAGGCTGGCCCTAGATGCTTTATCGTCAGGGTCTCTTCTTCATTTGGTTACGGTTGGCTTCGAACTTCGGATGATCAGCTTCAGCCCTCGGAGGGG
TTCGCGCTCGGCCTCGGCAAAATGTGCCTGGTCTCGGCCTTGGCCTGGGACTTGGGGAGGTTGAGGGCATGCGTCAACCTCTCTTCAAGCGTTGTGTTCATCCCAGGGGT
GCGTACACTCTTTTGGGAAAAACTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGTACTGTATTCATCCTGAGGGTGCGGGTGCGTACACTCTTCTGGGGAAAA
GCTTGGGGAGACCTAGGAAGTTCTCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCATACACTCTTTTGGGGAAAAAGCTTGGGGAGACCTAGGAAGTTTCCA
GGCCTCTCTTCAAGCATCATGATCATCCCACGGGGTGCGTACACTCTTCTAGGGAAAAGCTTGGGGAGACCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCAT
CCCAGGGGTGCGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGACCTAGGAAGTTCCTGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCATACACTCTT
CTGGGGAAAAGCTTGGAATCTCATCTCAAGGGTGCGTACACTCAGTCGAGGTCTCGAAATCTCATCTCGAGGGTGCGTACACTCAGCCGAGGTCTTGGAATCTCATCTCG
AGGGTTTTCCCATTCTTCCAAGGACATTTTGTTGGCTCAGCTACTCAGGCTTTCAGGAGCTCCATTTTTCCTCCTCGTGAAATAACGCTCCTGACGACCGAGAATAAAAA
GATGTTGTTGTCGCCACCTCCGATAAACTCTCGACTAAGTTGCTTTGAGTTGAGAGGCCTTCTATCTTCCCCACAGACGGCGCCAACTGTTGATGCCAAAATTTGGTCAA
GGGACTCACCTGACCTTCACGTGACATCAACGGTAAATTTATTTGAAGGGGAAAGACGTGGCCTGCAAAATAAGAGAAAACTGAGCATCGGTGTGGTGCTTGCCACACCG
ACTCCGATGCTTAAGTCAGTTGGGAGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTTCTTTAAATCATATCCTAATGCGGTGGTGCTGAGAGTTTTTAAAGAAGTTGAGATGTGGAACTCACCTGACCTTCACGTGACATCAACGGTAAATTTATTTGA
AGGGGAAAGACATGGCCTGCAAAATAAGAGAAAACTGAGCATCGGTGTGGTGCTTGCCACACCGACTCCGATGCTTAAGTCAGTTGGGAGATCTTACATAAGCTCTTCTG
AGTTCAAATATTCCAAGGCTGGCCCTAGATGCTTTATCGTCAGGGTCTCTTCTTCATTTGGTTACGGTTGGCTTCGAACTTCGGATGATCAGCTTCAGCCCTCGGAGGGG
TTCGCGCTCGGCCTCGGCAAAATGTGCCTGGTCTCGGCCTTGGCCTGGGACTTGGGGAGGTTGAGGGCATGCGTCAACCTCTCTTCAAGCGTTGTGTTCATCCCAGGGGT
GCGTACACTCTTTTGGGAAAAACTTGGGGAGGCCGAGGAAATTCCCGAGCCTCTCTTCAAGTACTGTATTCATCCTGAGGGTGCGGGTGCGTACACTCTTCTGGGGAAAA
GCTTGGGGAGACCTAGGAAGTTCTCGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCATACACTCTTTTGGGGAAAAAGCTTGGGGAGACCTAGGAAGTTTCCA
GGCCTCTCTTCAAGCATCATGATCATCCCACGGGGTGCGTACACTCTTCTAGGGAAAAGCTTGGGGAGACCTAGGAAGTTCCCGGGCCTCTCTTCAAGCATCGTGGTCAT
CCCAGGGGTGCGGGTGCGTACACTCTTCTGGGGAAAAGCTTGGGGAGACCTAGGAAGTTCCTGGGCCTCTCTTCAAGCATCGTGGTCATCCCAGGGGTGCATACACTCTT
CTGGGGAAAAGCTTGGAATCTCATCTCAAGGGTGCGTACACTCAGTCGAGGTCTCGAAATCTCATCTCGAGGGTGCGTACACTCAGCCGAGGTCTTGGAATCTCATCTCG
AGGGTTTTCCCATTCTTCCAAGGACATTTTGTTGGCTCAGCTACTCAGGCTTTCAGGAGCTCCATTTTTCCTCCTCGTGAAATAACGCTCCTGACGACCGAGAATAAAAA
GATGTTGTTGTCGCCACCTCCGATAAACTCTCGACTAAGTTGCTTTGAGTTGAGAGGCCTTCTATCTTCCCCACAGACGGCGCCAACTGTTGATGCCAAAATTTGGTCAA
GGGACTCACCTGACCTTCACGTGACATCAACGGTAAATTTATTTGAAGGGGAAAGACGTGGCCTGCAAAATAAGAGAAAACTGAGCATCGGTGTGGTGCTTGCCACACCG
ACTCCGATGCTTAAGTCAGTTGGGAGA
Protein sequenceShow/hide protein sequence
MSFFKSYPNAVVLRVFKEVEMWNSPDLHVTSTVNLFEGERHGLQNKRKLSIGVVLATPTPMLKSVGRSYISSSEFKYSKAGPRCFIVRVSSSFGYGWLRTSDDQLQPSEG
FALGLGKMCLVSALAWDLGRLRACVNLSSSVVFIPGVRTLFWEKLGEAEEIPEPLFKYCIHPEGAGAYTLLGKSLGRPRKFSGLSSSIVVIPGVHTLFWGKSLGRPRKFP
GLSSSIMIIPRGAYTLLGKSLGRPRKFPGLSSSIVVIPGVRVRTLFWGKAWGDLGSSWASLQASWSSQGCIHSSGEKLGISSQGCVHSVEVSKSHLEGAYTQPRSWNLIS
RVFPFFQGHFVGSATQAFRSSIFPPREITLLTTENKKMLLSPPPINSRLSCFELRGLLSSPQTAPTVDAKIWSRDSPDLHVTSTVNLFEGERRGLQNKRKLSIGVVLATP
TPMLKSVGR