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Spg037026 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037026
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold6:29769328..29773814
RNA-Seq ExpressionSpg037026
SyntenySpg037026
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]8.8e-0943.9Show/hide
Query:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS
        MV F E  +S   +LV+L D NQP   GLS +VE+P  G  A  WP   N   +   SVE PL +   AW L+SSIH + P+
Subjt:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS

KAA0050122.1 hypothetical protein E6C27_scaffold675G001390 [Cucumis melo var. makuwa]8.8e-0943.9Show/hide
Query:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS
        MV F E  +S   +LV+L D NQP   GLS LVE+P  G +A  WP   N   +   SVE PL ++   W L+SSIH + P+
Subjt:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS

KAA0053734.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.7e-0943.9Show/hide
Query:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS
        MV F E  +S   +LV+L D NQP   GLS +VE+P  G  A  WP   N   +   SVE PL +   AW L+SSIH + P+
Subjt:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS

TYK00336.1 hypothetical protein E5676_scaffold1923G00140 [Cucumis melo var. makuwa]1.2e-0843.53Show/hide
Query:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQ--NPSR
        MV F E  +S   +LV+L D NQP   GLS +VE+P  G     WP   N   +   SVE PL++   AW L+SSIH +  N SR
Subjt:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQ--NPSR

TYK06377.1 hypothetical protein E5676_scaffold163G00690 [Cucumis melo var. makuwa]8.8e-0943.9Show/hide
Query:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS
        MV F E  +S   +LV+L D NQP   GLS LVE+P  G +A  WP   N   +   SVE PL ++   W L+SSIH + P+
Subjt:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS

TrEMBL top hitse value%identityAlignment
A0A5A7TX42 Uncharacterized protein4.3e-0943.9Show/hide
Query:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS
        MV F E  +S   +LV+L D NQP   GLS +VE+P  G  A  WP   N   +   SVE PL +   AW L+SSIH + P+
Subjt:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS

A0A5A7U2Q8 PMD domain-containing protein4.3e-0943.9Show/hide
Query:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS
        MV F E  +S   +LV+L D NQP   GLS LVE+P  G +A  WP   N   +   SVE PL ++   W L+SSIH + P+
Subjt:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS

A0A5A7UET3 Putative mitochondrial protein3.3e-0943.9Show/hide
Query:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS
        MV F E  +S   +LV+L D NQP   GLS +VE+P  G  A  WP   N   +   SVE PL +   AW L+SSIH + P+
Subjt:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS

A0A5D3BQ12 PMD domain-containing protein5.6e-0943.53Show/hide
Query:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQ--NPSR
        MV F E  +S   +LV+L D NQP   GLS +VE+P  G     WP   N   +   SVE PL++   AW L+SSIH +  N SR
Subjt:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQ--NPSR

A0A5D3C3H5 PMD domain-containing protein4.3e-0943.9Show/hide
Query:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS
        MV F E  +S   +LV+L D NQP   GLS LVE+P  G +A  WP   N   +   SVE PL ++   W L+SSIH + P+
Subjt:  MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTGCTTTGCAGAACATATTGTCTCTAATAAGACGTACCTCGTTCTCCTGAAAGACAACAATCAACCCATAAGAAGCGGGCTCAGCTTCTTGGTAGAAGAGCCTAA
AACTGGACGTCTTGCAGCCCAATGGCCCCCACCACTAAATTTGCATACCATTTCTGATGGGTCCGTAGAGAGGCCTCTATACCAAGATTCTAAGGCTTGGTTTCTAGAAT
CTTCAATCCATACACAAAATCCTAGTCGACATCCAGAGGGAATCATCGACACGCCTAACTTGGCATGGCCTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTAC
GACATCAACACGATTTTAGAACAACTGGCACTATCGGCCAGTAGGCAAGAGTTTGCCGAGAGGCAAGCTTTAACATTCTGGAACTATGTTAGGAGTCGTGATGCCAATCT
GAAAAAGGCGCTGCAGGAGAATTTTTTCAAGCCGTATCCAGCACTTCCAGCATTCCCTGAAGATTTATTGAACCCCTGGATTCCGCCCCCACCGATGGAAAGAGGAGGAG
GGGATGATGAAAATGAGCAGGGCCAAGAGGACTGGCGGATGAAGTGGCCCTACGCGAGCATAATTTTTGTTCTGGAATTTTTCTTGGACTGGCTAAGCTTAATTAGATCA
AGGGATAAGGCTGGGTACCTTATCCTGGTGACACTGTGGATACGACCCGCTTTGTATATTGATACAAACGCAATGATCCAACGCGTTCATGTAGTTGACATGCGAGTGGG
GGTATCCTGTGCAATGAGTTTGCACAAAGACCGGACCGCGAAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGTGCTTTGCAGAACATATTGTCTCTAATAAGACGTACCTCGTTCTCCTGAAAGACAACAATCAACCCATAAGAAGCGGGCTCAGCTTCTTGGTAGAAGAGCCTAA
AACTGGACGTCTTGCAGCCCAATGGCCCCCACCACTAAATTTGCATACCATTTCTGATGGGTCCGTAGAGAGGCCTCTATACCAAGATTCTAAGGCTTGGTTTCTAGAAT
CTTCAATCCATACACAAAATCCTAGTCGACATCCAGAGGGAATCATCGACACGCCTAACTTGGCATGGCCTCAGCGTACGCAAGAGGCACGTCAGGGTGGGCTTGTCTAC
GACATCAACACGATTTTAGAACAACTGGCACTATCGGCCAGTAGGCAAGAGTTTGCCGAGAGGCAAGCTTTAACATTCTGGAACTATGTTAGGAGTCGTGATGCCAATCT
GAAAAAGGCGCTGCAGGAGAATTTTTTCAAGCCGTATCCAGCACTTCCAGCATTCCCTGAAGATTTATTGAACCCCTGGATTCCGCCCCCACCGATGGAAAGAGGAGGAG
GGGATGATGAAAATGAGCAGGGCCAAGAGGACTGGCGGATGAAGTGGCCCTACGCGAGCATAATTTTTGTTCTGGAATTTTTCTTGGACTGGCTAAGCTTAATTAGATCA
AGGGATAAGGCTGGGTACCTTATCCTGGTGACACTGTGGATACGACCCGCTTTGTATATTGATACAAACGCAATGATCCAACGCGTTCATGTAGTTGACATGCGAGTGGG
GGTATCCTGTGCAATGAGTTTGCACAAAGACCGGACCGCGAAATAG
Protein sequenceShow/hide protein sequence
MVCFAEHIVSNKTYLVLLKDNNQPIRSGLSFLVEEPKTGRLAAQWPPPLNLHTISDGSVERPLYQDSKAWFLESSIHTQNPSRHPEGIIDTPNLAWPQRTQEARQGGLVY
DINTILEQLALSASRQEFAERQALTFWNYVRSRDANLKKALQENFFKPYPALPAFPEDLLNPWIPPPPMERGGGDDENEQGQEDWRMKWPYASIIFVLEFFLDWLSLIRS
RDKAGYLILVTLWIRPALYIDTNAMIQRVHVVDMRVGVSCAMSLHKDRTAK