; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037048 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037048
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold6:28949444..28951721
RNA-Seq ExpressionSpg037048
SyntenySpg037048
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]1.6e-2432.2Show/hide
Query:  MKKRDFLNEKGF----SDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLREESINMAVVRGKMMK--------------------------
        ++ R    EKGF    S+  G LP F+++V+ ++ W++FCAHP++ +VPLVREFYA L +   N   VRG  +                           
Subjt:  MKKRDFLNEKGF----SDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLREESINMAVVRGKMMK--------------------------

Query:  ------EALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGS
                L+ VA    +W  S     + + S L   + V  HF+K+ L+PTTH   +S DR++LL+ ++ G  INVG +I  +I AC  ++ G LFF S
Subjt:  ------EALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGS

Query:  LITQLCQRVKIMPGKDEERHFFKPTIDLSLIGKLPQ
        LIT+LC+  +     +EE+      ID   + ++ Q
Subjt:  LITQLCQRVKIMPGKDEERHFFKPTIDLSLIGKLPQ

PON41193.1 LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_291710 [Parasponia andersonii]3.2e-1733.7Show/hide
Query:  PEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLR---------------EESIN---------------MAVVRGKMMKEALKLVANKRVQWKESQTK
        P F + V+ ++ W+ FCA+P++ ++PLV EFYA +                EE+IN               +  V    +   L+ VA    +W  S   
Subjt:  PEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLR---------------EESIN---------------MAVVRGKMMKEALKLVANKRVQWKESQTK

Query:  VKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGSLITQLC
          + + S+L   + +  HF+K+ L+PTTH   +S DR +LLY ++ G  INVG II  +I AC  K+ G LFF SLI +LC
Subjt:  VKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGSLITQLC

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]2.4e-2532.63Show/hide
Query:  MKKRDFLNEKGF----SDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLREESINMAVVRGKMMK--------------------------
        ++ R    EKGF    S+  G LP F+++V+ ++ W++FCAHP++ +VPLVREFYA L +   N   VRG  +                           
Subjt:  MKKRDFLNEKGF----SDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLREESINMAVVRGKMMK--------------------------

Query:  ------EALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGS
                L+ VA    +W  S     + + S L   + V  HF+K+RL+PTTH   +S DR++LL+ ++ G  INVG +I  +I AC  ++ G LFF S
Subjt:  ------EALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGS

Query:  LITQLCQRVKIMPGKDEERHFFKPTIDLSLIGKLPQ
        LIT+LC+  +     +EE+      ID   + ++ Q
Subjt:  LITQLCQRVKIMPGKDEERHFFKPTIDLSLIGKLPQ

PON46588.1 hypothetical protein TorRG33x02_325580, partial [Trema orientale]6.4e-1833.86Show/hide
Query:  ALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAG-----------------LREESINMAVVRGKMMKE---------------ALKLVANKRVQWKE
        A P F++ V+ ++  + FCAHP++ +VPLVREFYA                  L E++IN     G  + E                LK VA  R +   
Subjt:  ALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAG-----------------LREESINMAVVRGKMMKE---------------ALKLVANKRVQWKE

Query:  SQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGSLITQLCQRVK
        S     + + S+L   + +  HF+++RL+PTTH  ++S   V+LLY ++ G  INVG II D+I     +R+G LFF S +T+LCQ  +
Subjt:  SQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGSLITQLCQRVK

PON70375.1 hypothetical protein PanWU01x14_080440 [Parasponia andersonii]1.8e-2031.25Show/hide
Query:  KAASPKNPFPEVFKDVNFQER-MKIMKKRDFLNEKGFSDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAG-----------------LREES
        KA   ++   E+  + N Q R + + K+  + N K         P F++ V+ ++ WQ FCAHP++ +VPLVREFY                   L  E+
Subjt:  KAASPKNPFPEVFKDVNFQER-MKIMKKRDFLNEKGFSDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAG-----------------LREES

Query:  INMAVVRGKMMKE---------------ALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGS
        IN     G  + E                L+ VA    +W  S     + + S+L   + V  HF+K+RL+PTTH   +S + V LLY ++ G  INVG 
Subjt:  INMAVVRGKMMKE---------------ALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGS

Query:  IIRDKILACGRKRAGKLFFGSLITQLCQRVKIMPGKDEER
        +I  +I AC  +++G LFF SLIT +C+  +     +EE+
Subjt:  IIRDKILACGRKRAGKLFFGSLITQLCQRVKIMPGKDEER

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)7.6e-2532.2Show/hide
Query:  MKKRDFLNEKGF----SDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLREESINMAVVRGKMMK--------------------------
        ++ R    EKGF    S+  G LP F+++V+ ++ W++FCAHP++ +VPLVREFYA L +   N   VRG  +                           
Subjt:  MKKRDFLNEKGF----SDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLREESINMAVVRGKMMK--------------------------

Query:  ------EALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGS
                L+ VA    +W  S     + + S L   + V  HF+K+ L+PTTH   +S DR++LL+ ++ G  INVG +I  +I AC  ++ G LFF S
Subjt:  ------EALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGS

Query:  LITQLCQRVKIMPGKDEERHFFKPTIDLSLIGKLPQ
        LIT+LC+  +     +EE+      ID   + ++ Q
Subjt:  LITQLCQRVKIMPGKDEERHFFKPTIDLSLIGKLPQ

A0A2P5AXB5 Uncharacterized protein1.5e-1733.7Show/hide
Query:  PEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLR---------------EESIN---------------MAVVRGKMMKEALKLVANKRVQWKESQTK
        P F + V+ ++ W+ FCA+P++ ++PLV EFYA +                EE+IN               +  V    +   L+ VA    +W  S   
Subjt:  PEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLR---------------EESIN---------------MAVVRGKMMKEALKLVANKRVQWKESQTK

Query:  VKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGSLITQLC
          + + S+L   + +  HF+K+ L+PTTH   +S DR +LLY ++ G  INVG II  +I AC  K+ G LFF SLI +LC
Subjt:  VKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGSLITQLC

A0A2P5BCG4 Uncharacterized protein (Fragment)1.2e-2532.63Show/hide
Query:  MKKRDFLNEKGF----SDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLREESINMAVVRGKMMK--------------------------
        ++ R    EKGF    S+  G LP F+++V+ ++ W++FCAHP++ +VPLVREFYA L +   N   VRG  +                           
Subjt:  MKKRDFLNEKGF----SDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLREESINMAVVRGKMMK--------------------------

Query:  ------EALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGS
                L+ VA    +W  S     + + S L   + V  HF+K+RL+PTTH   +S DR++LL+ ++ G  INVG +I  +I AC  ++ G LFF S
Subjt:  ------EALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGS

Query:  LITQLCQRVKIMPGKDEERHFFKPTIDLSLIGKLPQ
        LIT+LC+  +     +EE+      ID   + ++ Q
Subjt:  LITQLCQRVKIMPGKDEERHFFKPTIDLSLIGKLPQ

A0A2P5BCT7 Uncharacterized protein (Fragment)3.1e-1833.86Show/hide
Query:  ALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAG-----------------LREESINMAVVRGKMMKE---------------ALKLVANKRVQWKE
        A P F++ V+ ++  + FCAHP++ +VPLVREFYA                  L E++IN     G  + E                LK VA  R +   
Subjt:  ALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAG-----------------LREESINMAVVRGKMMKE---------------ALKLVANKRVQWKE

Query:  SQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGSLITQLCQRVK
        S     + + S+L   + +  HF+++RL+PTTH  ++S   V+LLY ++ G  INVG II D+I     +R+G LFF S +T+LCQ  +
Subjt:  SQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGSLITQLCQRVK

A0A2P5DAQ2 Uncharacterized protein8.7e-2131.25Show/hide
Query:  KAASPKNPFPEVFKDVNFQER-MKIMKKRDFLNEKGFSDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAG-----------------LREES
        KA   ++   E+  + N Q R + + K+  + N K         P F++ V+ ++ WQ FCAHP++ +VPLVREFY                   L  E+
Subjt:  KAASPKNPFPEVFKDVNFQER-MKIMKKRDFLNEKGFSDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAG-----------------LREES

Query:  INMAVVRGKMMKE---------------ALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGS
        IN     G  + E                L+ VA    +W  S     + + S+L   + V  HF+K+RL+PTTH   +S + V LLY ++ G  INVG 
Subjt:  INMAVVRGKMMKE---------------ALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTTHDSMISVDRVMLLYCLMKGLEINVGS

Query:  IIRDKILACGRKRAGKLFFGSLITQLCQRVKIMPGKDEER
        +I  +I AC  +++G LFF SLIT +C+  +     +EE+
Subjt:  IIRDKILACGRKRAGKLFFGSLITQLCQRVKIMPGKDEER

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGATCATCATCCTCACGCAAAAACACTCGATCTCAGAGTGCACGACCGATCCATGAAGCTGAAGGAAGCAGTCGACGGCAAGAAGAGAACCCTGAAGCACACAT
GCAAGGCACGCGAAGGACGAGATCCACGGGATTCTCGCCGACGGTCGTGAACCGAGCGCCCAACGCTCCAGCTCCATCCTCTTCGACAATGTCGGCTAGTTCGAGGGAGA
TGTCGAGCTCATCTACACCAAGACGGTTCACGCGTGCCACTGCTGTCCACCAAACCCAAAAAACTCCCACTCAACAATTCAGAAAACGTTCACGGGAGTGGTTTGAGATG
ATCCGAGAGATGGGTGCCAAGAGAAGAGCTGCCCTTGAAGAAGAAGGGAATCGACAAGACGAAAAAAAGGCCGCCAAAGCAGCTGAAAGCTCTCGGCAAGGTGAAGCTTC
AATAGGTATGGTTTTCGAACCTTCAACTAACACCTTTCTATCTTGCAGGGCCAAACTCGTGGTTACTTACAGCGCAAGGAAGAAGAGCCCAAAGAAAAATGTATCTGAAG
AGCCGCTTGAAGTTCAGCCCCTGAAGATCGCAAAGATGCCGACCAATGTATTCGAAGGAATAATCTGCCAAGTAGTGGCAAAGGCTTTTGAGATTGCAGAGGGGTACAAG
GCTGAACAGGATGCTTTGAAAGAGGTTGAAGTGGAGAGAGAGATGGAAAATCAAAAGATGGCTGAAGAGGATGAGGTAGAAGACGAGGCCCAACACGGGCCAAGAGAAGA
AAATTTAGAAAAAGGAGAAAAAACAGAAAAAGAAGTAGAAGGCCAGAATGCGACCGCATCTGGGCCGCATTCTGAGGAAGGCCTAGCCGAGGCCAATAGAGAGCAGCCAG
CTGAAGAGGTTTTTGAGCCTCTATTCACATATGACCCACCAGCTGCTGATATCACCTCTTCAGGGGAGAAGAGGGATGAAAAGGAAAAAGAAGACGAGGAGGCCGAGACC
TCCAGTGATTCTGACTCCGATACAGAATCTGATTCAGAGATTAGGGAGCTAGATGAAGACCAAGTCCCTATCTCTGCAGCATTAAGAAGAAAAAGAAAGAGAGAGATTAA
GGCTGAGAGGAGGACGAAGAACAAGAATGACCCAATCTTTGCCAAGAGGCCGAGGACGAGATCCATGGACGCCTCTCCTGCAGTTCCTCCGACCATCTCACCCGTCAAGC
CTAAGGGCAAGTCACCCAAGGCTGCATCTCCTAAAAATCCGTTCCCTGAGGTATTTAAAGATGTTAATTTTCAGGAAAGGATGAAGATCATGAAGAAAAGAGATTTCCTC
AACGAGAAGGGATTCTCTGATCGAGCAGGAGCACTGCCTGAGTTCGTTAGCAGAGTTGTCTTCCGGTACAAGTGGCAGGAGTTCTGTGCTCACCCTCAAGAGGCTGTTGT
GCCCCTAGTTCGTGAATTCTACGCTGGCCTGAGGGAGGAGAGTATTAACATGGCGGTGGTGAGGGGGAAGATGATGAAGGAAGCATTGAAACTCGTGGCCAACAAAAGGG
TCCAATGGAAAGAATCGCAGACAAAAGTGAAGTCTCTAGTGCCAAGCAACCTAAAGGCAGAATCGGCAGTGCGCCTTCACTTCATCAAGAATCGCTTGATGCCAACCACC
CACGACAGCATGATTTCAGTAGATAGAGTGATGCTACTCTATTGCCTAATGAAGGGGTTGGAGATCAACGTAGGGAGCATAATTAGGGATAAAATCTTAGCCTGTGGACG
GAAAAGGGCAGGCAAGCTTTTCTTTGGCTCACTCATCACCCAGCTCTGTCAGAGGGTGAAGATTATGCCAGGCAAGGACGAGGAGCGCCATTTCTTTAAACCAACCATTG
ACTTGTCCTTGATAGGAAAGCTTCCGCAGAACAACATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAAGGATCATCATCCTCACGCAAAAACACTCGATCTCAGAGTGCACGACCGATCCATGAAGCTGAAGGAAGCAGTCGACGGCAAGAAGAGAACCCTGAAGCACACAT
GCAAGGCACGCGAAGGACGAGATCCACGGGATTCTCGCCGACGGTCGTGAACCGAGCGCCCAACGCTCCAGCTCCATCCTCTTCGACAATGTCGGCTAGTTCGAGGGAGA
TGTCGAGCTCATCTACACCAAGACGGTTCACGCGTGCCACTGCTGTCCACCAAACCCAAAAAACTCCCACTCAACAATTCAGAAAACGTTCACGGGAGTGGTTTGAGATG
ATCCGAGAGATGGGTGCCAAGAGAAGAGCTGCCCTTGAAGAAGAAGGGAATCGACAAGACGAAAAAAAGGCCGCCAAAGCAGCTGAAAGCTCTCGGCAAGGTGAAGCTTC
AATAGGTATGGTTTTCGAACCTTCAACTAACACCTTTCTATCTTGCAGGGCCAAACTCGTGGTTACTTACAGCGCAAGGAAGAAGAGCCCAAAGAAAAATGTATCTGAAG
AGCCGCTTGAAGTTCAGCCCCTGAAGATCGCAAAGATGCCGACCAATGTATTCGAAGGAATAATCTGCCAAGTAGTGGCAAAGGCTTTTGAGATTGCAGAGGGGTACAAG
GCTGAACAGGATGCTTTGAAAGAGGTTGAAGTGGAGAGAGAGATGGAAAATCAAAAGATGGCTGAAGAGGATGAGGTAGAAGACGAGGCCCAACACGGGCCAAGAGAAGA
AAATTTAGAAAAAGGAGAAAAAACAGAAAAAGAAGTAGAAGGCCAGAATGCGACCGCATCTGGGCCGCATTCTGAGGAAGGCCTAGCCGAGGCCAATAGAGAGCAGCCAG
CTGAAGAGGTTTTTGAGCCTCTATTCACATATGACCCACCAGCTGCTGATATCACCTCTTCAGGGGAGAAGAGGGATGAAAAGGAAAAAGAAGACGAGGAGGCCGAGACC
TCCAGTGATTCTGACTCCGATACAGAATCTGATTCAGAGATTAGGGAGCTAGATGAAGACCAAGTCCCTATCTCTGCAGCATTAAGAAGAAAAAGAAAGAGAGAGATTAA
GGCTGAGAGGAGGACGAAGAACAAGAATGACCCAATCTTTGCCAAGAGGCCGAGGACGAGATCCATGGACGCCTCTCCTGCAGTTCCTCCGACCATCTCACCCGTCAAGC
CTAAGGGCAAGTCACCCAAGGCTGCATCTCCTAAAAATCCGTTCCCTGAGGTATTTAAAGATGTTAATTTTCAGGAAAGGATGAAGATCATGAAGAAAAGAGATTTCCTC
AACGAGAAGGGATTCTCTGATCGAGCAGGAGCACTGCCTGAGTTCGTTAGCAGAGTTGTCTTCCGGTACAAGTGGCAGGAGTTCTGTGCTCACCCTCAAGAGGCTGTTGT
GCCCCTAGTTCGTGAATTCTACGCTGGCCTGAGGGAGGAGAGTATTAACATGGCGGTGGTGAGGGGGAAGATGATGAAGGAAGCATTGAAACTCGTGGCCAACAAAAGGG
TCCAATGGAAAGAATCGCAGACAAAAGTGAAGTCTCTAGTGCCAAGCAACCTAAAGGCAGAATCGGCAGTGCGCCTTCACTTCATCAAGAATCGCTTGATGCCAACCACC
CACGACAGCATGATTTCAGTAGATAGAGTGATGCTACTCTATTGCCTAATGAAGGGGTTGGAGATCAACGTAGGGAGCATAATTAGGGATAAAATCTTAGCCTGTGGACG
GAAAAGGGCAGGCAAGCTTTTCTTTGGCTCACTCATCACCCAGCTCTGTCAGAGGGTGAAGATTATGCCAGGCAAGGACGAGGAGCGCCATTTCTTTAAACCAACCATTG
ACTTGTCCTTGATAGGAAAGCTTCCGCAGAACAACATCTGA
Protein sequenceShow/hide protein sequence
MQGSSSSRKNTRSQSARPIHEAEGSSRRQEENPEAHMQGTRRTRSTGFSPTVVNRAPNAPAPSSSTMSASSREMSSSSTPRRFTRATAVHQTQKTPTQQFRKRSREWFEM
IREMGAKRRAALEEEGNRQDEKKAAKAAESSRQGEASIGMVFEPSTNTFLSCRAKLVVTYSARKKSPKKNVSEEPLEVQPLKIAKMPTNVFEGIICQVVAKAFEIAEGYK
AEQDALKEVEVEREMENQKMAEEDEVEDEAQHGPREENLEKGEKTEKEVEGQNATASGPHSEEGLAEANREQPAEEVFEPLFTYDPPAADITSSGEKRDEKEKEDEEAET
SSDSDSDTESDSEIRELDEDQVPISAALRRKRKREIKAERRTKNKNDPIFAKRPRTRSMDASPAVPPTISPVKPKGKSPKAASPKNPFPEVFKDVNFQERMKIMKKRDFL
NEKGFSDRAGALPEFVSRVVFRYKWQEFCAHPQEAVVPLVREFYAGLREESINMAVVRGKMMKEALKLVANKRVQWKESQTKVKSLVPSNLKAESAVRLHFIKNRLMPTT
HDSMISVDRVMLLYCLMKGLEINVGSIIRDKILACGRKRAGKLFFGSLITQLCQRVKIMPGKDEERHFFKPTIDLSLIGKLPQNNI