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Spg037093 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037093
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionGag/pol protein
Genome locationscaffold1:52191732..52197687
RNA-Seq ExpressionSpg037093
SyntenySpg037093
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025163.1 hypothetical protein E6C27_scaffold2405G00100 [Cucumis melo var. makuwa]1.8e-0480.56Show/hide
Query:  PLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSS
        PL TLSVLHDNDA VE ELPVP+TLP SAESF S+S
Subjt:  PLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSS

KAA0061963.1 hypothetical protein E6C27_scaffold89G002570 [Cucumis melo var. makuwa]1.4e-0456.52Show/hide
Query:  GYIPLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSSSPHRSFG
        GY+PLLTLS+LH+NDA VE E PVP+ LP SAE+ +S ++   ++G
Subjt:  GYIPLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSSSPHRSFG

KAA0067816.1 gag/pol protein [Cucumis melo var. makuwa]2.4e-0482.86Show/hide
Query:  LLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSS
        L TLSVL+DNDAFVE ELPVPNTLP SAESF S+S
Subjt:  LLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSS

TrEMBL top hitse value%identityAlignment
A0A5A7SKG8 Uncharacterized protein8.8e-0580.56Show/hide
Query:  PLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSS
        PL TLSVLHDNDA VE ELPVP+TLP SAESF S+S
Subjt:  PLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSS

A0A5A7V1D5 Uncharacterized protein6.7e-0556.52Show/hide
Query:  GYIPLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSSSPHRSFG
        GY+PLLTLS+LH+NDA VE E PVP+ LP SAE+ +S ++   ++G
Subjt:  GYIPLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSSSPHRSFG

A0A5A7VI26 Putative DNA/RNA polymerases superfamily protein7.4e-0475.68Show/hide
Query:  PLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSSS
        PL TLSVL DNDA VE ELPVP+TLP S ESF S+SS
Subjt:  PLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSSS

A0A5A7VMN7 Gag/pol protein1.1e-0482.86Show/hide
Query:  LLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSS
        L TLSVL+DNDAFVE ELPVPNTLP SAESF S+S
Subjt:  LLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSS

A0A5D3DK46 Uncharacterized protein5.7e-0452Show/hide
Query:  FISSGYIPLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSSSPHRSFG
        F   GY+ LLTLS+LH+NDA VE E PVP+ LP SAE+ +S ++   ++G
Subjt:  FISSGYIPLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSSSPHRSFG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTTTTAGAATGGAAAACAGAGCACAGGATTTTCAAACAAAGCAGGAGGATATCTGGAGAAATATAGAGGTAGCAGAGAAGCTCGAATCTGTGTTGTCTGAGTTCAG
GGCACATCTGAACAAATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCATGACAACGATGCTTTTGTAGAGGCCGAGC
TCCCGGTGCCTAATACACTGCCAATGTCTGCTGAAAGTTTCGTATCAAGCTCCAGTCCTCACCGGAGCTTTGGAAGCAATTCGGGGCTTAAACTAGCAAAACCAAAGCGT
AAAATGACCATTCTGCCCCTGGAGCCGTCGCAACGTCGAGACACTGCTGTTGAAGGGTCGGGACGCTGCTCAAATAAGGAAAAGTCGTGGCGCCAAGTTGAGGCGGGAGC
GTCGCGACGCTCTCGCCATAGCGTCTCGACGCTATGTCAATCCGCATATCTTTTCCATAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTTTTTAGAATGGAAAACAGAGCACAGGATTTTCAAACAAAGCAGGAGGATATCTGGAGAAATATAGAGGTAGCAGAGAAGCTCGAATCTGTGTTGTCTGAGTTCAG
GGCACATCTGAACAAATTGGTTGGGAATCTCGTTTTCATTTCTTCAGGTTATATTCCGTTGTTGACGTTGAGTGTACTCCATGACAACGATGCTTTTGTAGAGGCCGAGC
TCCCGGTGCCTAATACACTGCCAATGTCTGCTGAAAGTTTCGTATCAAGCTCCAGTCCTCACCGGAGCTTTGGAAGCAATTCGGGGCTTAAACTAGCAAAACCAAAGCGT
AAAATGACCATTCTGCCCCTGGAGCCGTCGCAACGTCGAGACACTGCTGTTGAAGGGTCGGGACGCTGCTCAAATAAGGAAAAGTCGTGGCGCCAAGTTGAGGCGGGAGC
GTCGCGACGCTCTCGCCATAGCGTCTCGACGCTATGTCAATCCGCATATCTTTTCCATAGTTGA
Protein sequenceShow/hide protein sequence
MVFRMENRAQDFQTKQEDIWRNIEVAEKLESVLSEFRAHLNKLVGNLVFISSGYIPLLTLSVLHDNDAFVEAELPVPNTLPMSAESFVSSSSPHRSFGSNSGLKLAKPKR
KMTILPLEPSQRRDTAVEGSGRCSNKEKSWRQVEAGASRRSRHSVSTLCQSAYLFHS