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Spg037098 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037098
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L36
Genome locationscaffold1:51562643..51569550
RNA-Seq ExpressionSpg037098
SyntenySpg037098
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000509 - Ribosomal protein L36e
IPR038097 - Ribosomal protein L36e domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EMS54664.1 60S ribosomal protein L36-1 [Triticum urartu]2.6e-1771.79Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDKYWDSSLARLWE
        K +KRV F R LIREVA FAPYE+RIT+LLKVGKDKRALKVA+RKLGTHKRA KKKRGDVQC  +D++   S++  WE
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDKYWDSSLARLWE

XP_004140771.1 60S ribosomal protein L36-2 [Cucumis sativus]1.3e-1688.14Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        KSSKRVLFVR LIREVAGFAPYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAKKKR ++
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

XP_037424300.1 uncharacterized protein LOC119288933 isoform X1 [Triticum dicoccoides]3.4e-1771.43Show/hide
Query:  EKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDKYWDSSLARL
        +K +KRV FVR LIREVAGFAPYE+RIT+LLKVGKDKRA KVA++KLGTHKRA KKKRGDVQC  +D+    +L+ L
Subjt:  EKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDKYWDSSLARL

XP_037424301.1 uncharacterized protein LOC119288933 isoform X2 [Triticum dicoccoides]7.6e-1777.94Show/hide
Query:  EKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK
        +K +KRV FVR LIREVAGFAPYE+RIT+LLKVGKDKRA KVA++KLGTHKRA KKKRGDVQC  +D+
Subjt:  EKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK

XP_037424302.1 uncharacterized protein LOC119288933 isoform X3 [Triticum dicoccoides]7.6e-1777.94Show/hide
Query:  EKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK
        +K +KRV FVR LIREVAGFAPYE+RIT+LLKVGKDKRA KVA++KLGTHKRA KKKRGDVQC  +D+
Subjt:  EKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK

TrEMBL top hitse value%identityAlignment
A0A0A0L6L0 60S ribosomal protein L366.3e-1788.14Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        KSSKRVLFVR LIREVAGFAPYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAKKKR ++
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

A0A1S3AYD7 60S ribosomal protein L366.3e-1788.14Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        KSSKRVLFVR LIREVAGFAPYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAKKKR ++
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

A0A453BY86 60S ribosomal protein L363.7e-1777.94Show/hide
Query:  EKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK
        +K +KRV FVR LIREVAGFAPYE+RIT+LLKVGKDKRALKV +R LGTHKRA KKKRGDVQC  +D+
Subjt:  EKSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK

A9P9I5 60S ribosomal protein L366.3e-1788.14Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        KSSKRVLFVR LIREVAGFAPYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAKKKR ++
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

M8A2M1 60S ribosomal protein L361.3e-1771.79Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDKYWDSSLARLWE
        K +KRV F R LIREVA FAPYE+RIT+LLKVGKDKRALKVA+RKLGTHKRA KKKRGDVQC  +D++   S++  WE
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDKYWDSSLARLWE

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-13.6e-1777.97Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        K+SKR +F+R LIREVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

P52866 60S ribosomal protein L363.3e-1566.67Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAK-KKRGDVQCSSQDKYW
        K+SKR  FVR LIREVAGF PYE+RIT+LLKVGKDKRALKV + K+G  + +K ++RGDVQCS  D+ W
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAK-KKRGDVQCSSQDKYW

Q9LRB8 60S ribosomal protein L369.1e-1368.42Show/hide
Query:  SKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        S+RV  VR ++REVAG+APYERR+ +LLKVGKDKRALK+ +RKLGTH R KKKR ++
Subjt:  SKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

Q9LZ57 60S ribosomal protein L36-31.8e-1676.27Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        K+SKR +F+R LI+EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

Q9M352 60S ribosomal protein L36-21.8e-1676.27Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        K+SKR +F+R LI+EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein2.5e-1877.97Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        K+SKR +F+R LIREVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

AT2G37600.2 Ribosomal protein L36e family protein2.5e-1877.97Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        K+SKR +F+R LIREVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

AT3G53740.2 Ribosomal protein L36e family protein1.3e-1776.27Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        K+SKR +F+R LI+EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

AT3G53740.3 Ribosomal protein L36e family protein1.3e-1776.27Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        K+SKR +F+R LI+EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

AT3G53740.4 Ribosomal protein L36e family protein1.3e-1776.27Show/hide
Query:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        K+SKR +F+R LI+EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  KSSKRVLFVRILIREVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCGACCAATCGTCGGCGTGCAACAACTCTTGGTCGACGTCTTGGATGGCAGTGGGCAGTTGCAGCTTCGGGTCTGCAAGTTTTTGGCGATTCGGCAGTCCATTT
GCGTCTTCTAATGGTTTCAAGCAATGGGTTTTTACTCTCCTTTGACTTTTCGGCATGTGGATTCGCGGCCAGCACCCTTCCCTTCACGTTGCTCAGCGGTTCAGTAGGTA
GGTCTTTAATTTCCAGCAATTTCGTGCGATTTCGTTTGTGGGTAAGAGAAAAAAGTAGCAAAAGAGTTCTCTTTGTGAGGATTTTGATTCGGGAAGTTGCTGGCTTTGCA
CCATATGAGAGGAGAATCACTAAGCTTCTTAAAGTTGGAAAGGACAAGAGAGCACTAAAAGTGGCTAGGAGAAAGTTGGGAACTCACAAGAGAGCCAAGAAGAAGAGAGG
AGATGTCCAGTGTTCTTCGCAAGATAAGTATTGGGATTCGTCATTGGCCCGATTGTGGGAGGCTTTTTGGCTCAGGTCTAGAAAAATTTTGGGTTATTCCTATGTATGTT
GTTATGCTGTTGAAATTTTCGGAGCACTCGAGCTCGAAACAACAATTCCAACGCCTTTTGAATCACTCAAATCGGAGCTCAAACGAAGAAGTTATGGCCAAAACAAAATT
GATGAAGAAAATCCAACGTGGCATGACACGTGGCAAGCTGATGATGTGGCATCCGACGTGGCACGCAAACCGGTCAAAATTGATGACGTGACAGCTTACGTGGCGGATGA
CGTGGCACTTCAACTGACACTTTTTGCTGACGTGGCGATGACGTGGAATGTGACGTGGTTGTTGACGTGGCAATCGTGGACCAATAGAAAATGGAAACGTGGCGAGCTGT
TAAATAATAAAAAAAGAAGAAAAAGAGGAGAAATCGTTGATTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCGACCAATCGTCGGCGTGCAACAACTCTTGGTCGACGTCTTGGATGGCAGTGGGCAGTTGCAGCTTCGGGTCTGCAAGTTTTTGGCGATTCGGCAGTCCATTT
GCGTCTTCTAATGGTTTCAAGCAATGGGTTTTTACTCTCCTTTGACTTTTCGGCATGTGGATTCGCGGCCAGCACCCTTCCCTTCACGTTGCTCAGCGGTTCAGTAGGTA
GGTCTTTAATTTCCAGCAATTTCGTGCGATTTCGTTTGTGGGTAAGAGAAAAAAGTAGCAAAAGAGTTCTCTTTGTGAGGATTTTGATTCGGGAAGTTGCTGGCTTTGCA
CCATATGAGAGGAGAATCACTAAGCTTCTTAAAGTTGGAAAGGACAAGAGAGCACTAAAAGTGGCTAGGAGAAAGTTGGGAACTCACAAGAGAGCCAAGAAGAAGAGAGG
AGATGTCCAGTGTTCTTCGCAAGATAAGTATTGGGATTCGTCATTGGCCCGATTGTGGGAGGCTTTTTGGCTCAGGTCTAGAAAAATTTTGGGTTATTCCTATGTATGTT
GTTATGCTGTTGAAATTTTCGGAGCACTCGAGCTCGAAACAACAATTCCAACGCCTTTTGAATCACTCAAATCGGAGCTCAAACGAAGAAGTTATGGCCAAAACAAAATT
GATGAAGAAAATCCAACGTGGCATGACACGTGGCAAGCTGATGATGTGGCATCCGACGTGGCACGCAAACCGGTCAAAATTGATGACGTGACAGCTTACGTGGCGGATGA
CGTGGCACTTCAACTGACACTTTTTGCTGACGTGGCGATGACGTGGAATGTGACGTGGTTGTTGACGTGGCAATCGTGGACCAATAGAAAATGGAAACGTGGCGAGCTGT
TAAATAATAAAAAAAGAAGAAAAAGAGGAGAAATCGTTGATTGA
Protein sequenceShow/hide protein sequence
MIPTNRRRATTLGRRLGWQWAVAASGLQVFGDSAVHLRLLMVSSNGFLLSFDFSACGFAASTLPFTLLSGSVGRSLISSNFVRFRLWVREKSSKRVLFVRILIREVAGFA
PYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDVQCSSQDKYWDSSLARLWEAFWLRSRKILGYSYVCCYAVEIFGALELETTIPTPFESLKSELKRRSYGQNKI
DEENPTWHDTWQADDVASDVARKPVKIDDVTAYVADDVALQLTLFADVAMTWNVTWLLTWQSWTNRKWKRGELLNNKKRRKRGEIVD