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Spg037104 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037104
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiontranscription factor MYB34
Genome locationscaffold1:50448268..50450644
RNA-Seq ExpressionSpg037104
SyntenySpg037104
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG8491357.1 hypothetical protein CXB51_014478 [Gossypium anomalum]2.8e-0746.99Show/hide
Query:  VDPEIDRTYHRRKRNRRPRRQTGEM-----AAPNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI
        VDPEI+RT+ +RKR    RR T EM        N  N   NPI + DDR R +R YA P   + NPGI +P +E ++FELKP+
Subjt:  VDPEIDRTYHRRKRNRRPRRQTGEM-----AAPNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI

WP_217833177.1 retrotransposon gag domain-containing protein, partial [Synechococcus sp. PCC 7002]1.8e-0642.72Show/hide
Query:  FEVDPEIDRTYHRRKRNRRPRR--QTGEM---AAPNQPNRP-----------------LNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLE-TERFEL
        F++DPEI+RT+ RR R  + RR  QT E    A  NQP  P                  NPI +  DR R +R+YA+P   NF PGI+QPT E   RFE+
Subjt:  FEVDPEIDRTYHRRKRNRRPRR--QTGEM---AAPNQPNRP-----------------LNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLE-TERFEL

Query:  KPI
        KP+
Subjt:  KPI

XP_030490806.1 uncharacterized protein LOC115707099 [Cannabis sativa]1.8e-0637.5Show/hide
Query:  VDPEIDRTYHRRKRNRRPRRQTGEMAA--PNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI
        +DP+I+ T+ +R++ ++ +++   +        +   NPI + DDRAR IR+YAAP     NPGIV+P ++   FELKP+
Subjt:  VDPEIDRTYHRRKRNRRPRRQTGEMAA--PNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI

XP_030508936.1 uncharacterized protein LOC115723589 [Cannabis sativa]2.8e-0740Show/hide
Query:  VDPEIDRTYHRRKRNRRPRRQ--TGEMAAPNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI
        +DPEI+RT+ +R++ ++ +++    +       +   NPI + DDRAR IR+YAAP     NPGIV+P ++   FELKP+
Subjt:  VDPEIDRTYHRRKRNRRPRRQ--TGEMAAPNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI

XP_030509259.1 uncharacterized protein LOC115723937 [Cannabis sativa]8.1e-0738.75Show/hide
Query:  VDPEIDRTYHRRKRNRRPRRQ--TGEMAAPNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI
        +DPEI+RT+ +R++ ++ +++    +       +   NPI + DDRAR IR+YA P     NPGIV+P ++   FELKP+
Subjt:  VDPEIDRTYHRRKRNRRPRRQ--TGEMAAPNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI

TrEMBL top hitse value%identityAlignment
A0A6J1DX14 uncharacterized protein LOC1110252344.8e-0542.5Show/hide
Query:  RQTGEMAAPNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKP-----------IGDEDPLRPIQ
        R  G++A  +    PLN I + DD  + IR YAAPA  +FNP IV P +E +RFELKP           +  EDP R +Q
Subjt:  RQTGEMAAPNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKP-----------IGDEDPLRPIQ

A0A6J1EQ90 uncharacterized protein LOC1114364111.3e-0536.73Show/hide
Query:  IEFEVDPEIDRTYHRRKRNRRPRRQTG----EMAA------------PNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI
        +EF +DPEI+RT+ RR + ++   +      E+ A             NQ     NPI + DDR R IR YA PA    NP I++P ++   FELKP+
Subjt:  IEFEVDPEIDRTYHRRKRNRRPRRQTG----EMAA------------PNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI

A0A6P4PUC4 transcription factor MYB341.4e-0442.35Show/hide
Query:  VDPEIDRTYHRRKRNRRPRRQTGEMAAPNQ-------PNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI
        VDPEI RT+ +R+R R  +RQ  EM   NQ        N+   PI + DDR   IR Y  P     N GI  P +E  +FELKP+
Subjt:  VDPEIDRTYHRRKRNRRPRRQTGEMAAPNQ-------PNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI

U5CUI2 Retrotrans_gag domain-containing protein2.2e-0556.82Show/hide
Query:  LNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI
        +NPI + DDRAR IR+YAAP     NPGIV+P ++  +FELKP+
Subjt:  LNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI

W9RHB3 Putative disease resistance RPP13-like protein 11.3e-0542.39Show/hide
Query:  FEVDPEIDRTYHRRKRNRRPRRQTGEMAAPN---------QPNRPLNPIQ---MVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI
        F  DPEI+RT  RR+R +R      EMA  +         Q    L P Q   +VDDR R IRD+A P     NP IV+P +E   FELKP+
Subjt:  FEVDPEIDRTYHRRKRNRRPRRQTGEMAAPN---------QPNRPLNPIQ---MVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTTCTCCACGCGATTCCTCTTCGTGTCGTCTCTCTCTTCACGCTGATCGCTTGCGAAATACAAGTTATTTACCCTCTAAATTTAGGCTAAAAGAAGGCAAAAA
GAACCTCCGATGCGTTATCTTAGCGCATAAAGAAAAGGAAAAGTGCTTTGATATAAGCGGCAGGCTATATTTGTCTAAACCTTCTCTTCAAGGCTTAGCGCAAGCGCCTC
ATGCGGCGATAAGTGCAACCTTGAATATATATACTTTTGTTCCATTTCCCTGTGGATTCGACCCTGAACTCATCAGGAACAAGAATTGTATGCGTGCCGCCCGACGAATT
GAATTCGAGGTAGATCCTGAAATAGATAGAACATACCACAGAAGAAAAAGAAATCGTAGACCTCGAAGGCAAACAGGAGAAATGGCAGCACCAAACCAACCAAATAGACC
ATTAAACCCCATCCAAATGGTCGATGATAGGGCCAGAGGAATTAGGGATTATGCAGCCCCTGCAAATTGCAATTTCAATCCAGGGATAGTTCAGCCAACTCTAGAAACAG
AAAGGTTTGAACTAAAACCTATAGGCGACGAAGACCCATTAAGGCCAATTCAGGAAGTTTTGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTTCTCCACGCGATTCCTCTTCGTGTCGTCTCTCTCTTCACGCTGATCGCTTGCGAAATACAAGTTATTTACCCTCTAAATTTAGGCTAAAAGAAGGCAAAAA
GAACCTCCGATGCGTTATCTTAGCGCATAAAGAAAAGGAAAAGTGCTTTGATATAAGCGGCAGGCTATATTTGTCTAAACCTTCTCTTCAAGGCTTAGCGCAAGCGCCTC
ATGCGGCGATAAGTGCAACCTTGAATATATATACTTTTGTTCCATTTCCCTGTGGATTCGACCCTGAACTCATCAGGAACAAGAATTGTATGCGTGCCGCCCGACGAATT
GAATTCGAGGTAGATCCTGAAATAGATAGAACATACCACAGAAGAAAAAGAAATCGTAGACCTCGAAGGCAAACAGGAGAAATGGCAGCACCAAACCAACCAAATAGACC
ATTAAACCCCATCCAAATGGTCGATGATAGGGCCAGAGGAATTAGGGATTATGCAGCCCCTGCAAATTGCAATTTCAATCCAGGGATAGTTCAGCCAACTCTAGAAACAG
AAAGGTTTGAACTAAAACCTATAGGCGACGAAGACCCATTAAGGCCAATTCAGGAAGTTTTGAAGTAG
Protein sequenceShow/hide protein sequence
MGSSPRDSSSCRLSLHADRLRNTSYLPSKFRLKEGKKNLRCVILAHKEKEKCFDISGRLYLSKPSLQGLAQAPHAAISATLNIYTFVPFPCGFDPELIRNKNCMRAARRI
EFEVDPEIDRTYHRRKRNRRPRRQTGEMAAPNQPNRPLNPIQMVDDRARGIRDYAAPANCNFNPGIVQPTLETERFELKPIGDEDPLRPIQEVLK