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Spg037107 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037107
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L36
Genome locationscaffold1:50793256..50795483
RNA-Seq ExpressionSpg037107
SyntenySpg037107
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0044281 - small molecule metabolic process (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EMS54664.1 60S ribosomal protein L36-1 [Triticum urartu]3.1e-1274.19Show/hide
Query:  VRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK
        V F   +  EVA FAPYE+RIT+LLKVGKDKRALKVA+RKLGTHKRA KKKRGDVQC  +D+
Subjt:  VRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK

KAD1196178.1 hypothetical protein E3N88_43164 [Mikania micrantha]4.1e-1269.84Show/hide
Query:  GRSLISSNFVRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        G++   ++FVR  +W   EVAGFAPYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAKKKR ++
Subjt:  GRSLISSNFVRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

XP_037424300.1 uncharacterized protein LOC119288933 isoform X1 [Triticum dicoccoides]3.1e-1279.63Show/hide
Query:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDKK
        EVAGFAPYE+RIT+LLKVGKDKRA KVA++KLGTHKRA KKKRGDVQC  +D++
Subjt:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDKK

XP_037424301.1 uncharacterized protein LOC119288933 isoform X2 [Triticum dicoccoides]3.1e-1279.63Show/hide
Query:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDKK
        EVAGFAPYE+RIT+LLKVGKDKRA KVA++KLGTHKRA KKKRGDVQC  +D++
Subjt:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDKK

XP_037424302.1 uncharacterized protein LOC119288933 isoform X3 [Triticum dicoccoides]2.4e-1280Show/hide
Query:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDKKL
        EVAGFAPYE+RIT+LLKVGKDKRA KVA++KLGTHKRA KKKRGDVQC  +D+ L
Subjt:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDKKL

TrEMBL top hitse value%identityAlignment
A0A453BY68 60S ribosomal protein L362.0e-1281.13Show/hide
Query:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK
        EVAGFAPYE+RIT+LLKVGKDKRALKV +R LGTHKRA KKKRGDVQC  +D+
Subjt:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK

A0A453BY86 60S ribosomal protein L362.0e-1281.13Show/hide
Query:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK
        EVAGFAPYE+RIT+LLKVGKDKRALKV +R LGTHKRA KKKRGDVQC  +D+
Subjt:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK

A0A5N6LFM1 60S ribosomal protein L362.0e-1269.84Show/hide
Query:  GRSLISSNFVRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        G++   ++FVR  +W   EVAGFAPYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAKKKR ++
Subjt:  GRSLISSNFVRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

A0A6G1E631 60S ribosomal protein L367.5e-1271.43Show/hide
Query:  GRSLISSNFVRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        G+S    NFVR  +    EVAGFAPYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAKKKR ++
Subjt:  GRSLISSNFVRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

M8A2M1 60S ribosomal protein L361.5e-1274.19Show/hide
Query:  VRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK
        V F   +  EVA FAPYE+RIT+LLKVGKDKRALKVA+RKLGTHKRA KKKRGDVQC  +D+
Subjt:  VRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRA-KKKRGDVQCSSQDK

SwissProt top hitse value%identityAlignment
O80929 60S ribosomal protein L36-12.5e-1282.22Show/hide
Query:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

P52866 60S ribosomal protein L363.0e-1054.93Show/hide
Query:  GRSLISSNFVRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAK-KKRGDVQCSSQDK
        G++   ++FVR  +    EVAGF PYE+RIT+LLKVGKDKRALKV + K+G  + +K ++RGDVQCS  D+
Subjt:  GRSLISSNFVRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAK-KKRGDVQCSSQDK

Q9LRB8 60S ribosomal protein L361.0e-1059.68Show/hide
Query:  RSLISSNFVRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        +  +S    + R  VR EVAG+APYERR+ +LLKVGKDKRALK+ +RKLGTH R KKKR ++
Subjt:  RSLISSNFVRFRLWVREEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

Q9LZ57 60S ribosomal protein L36-34.2e-1280.43Show/hide
Query:  EEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        +EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  EEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

Q9M352 60S ribosomal protein L36-24.2e-1280.43Show/hide
Query:  EEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        +EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  EEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

Arabidopsis top hitse value%identityAlignment
AT2G37600.1 Ribosomal protein L36e family protein1.8e-1382.22Show/hide
Query:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

AT2G37600.2 Ribosomal protein L36e family protein1.8e-1382.22Show/hide
Query:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  EVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

AT3G53740.2 Ribosomal protein L36e family protein3.0e-1380.43Show/hide
Query:  EEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        +EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  EEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

AT3G53740.3 Ribosomal protein L36e family protein3.0e-1380.43Show/hide
Query:  EEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        +EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  EEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV

AT3G53740.4 Ribosomal protein L36e family protein3.0e-1380.43Show/hide
Query:  EEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV
        +EVAG APYE+RIT+LLKVGKDKRALKVA+RKLGTHKRAK+KR ++
Subjt:  EEVAGFAPYERRITKLLKVGKDKRALKVARRKLGTHKRAKKKRGDV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTCCGACCAATCGTCAGCGTGCAACAACTCTTGGTCGACGTCTTGGATGGCAGTGGGCAGTTGCAGCGACAGGTCTGCAAGTTTTTGGCGATTCGGCAGTCCATTT
GCGTCTTCTAATTGTTTCAAGCTATGGGTTTTTACTCTCCTTTGACTTTTCGACATGTGGATTCGCGGCCAGCACCCTTCCCTTCACGTTGCTCAGCGGTTCAGTAGGTA
GGTCTTTAATTTCCAGCAATTTCGTGCGATTTCGTTTGTGGGTAAGAGAAGAAGTTGCTGGCTTTGCACCATATGAGAGGAGAATCACTAAGCTTCTTAAAGTTGGAAAG
GACAAGAGAGCACTAAAAGTGGCTAGGAGAAAGTTGGGAACTCACAAGAGAGCCAAGAAGAAGAGAGGAGATGTCCAGTGTTCTTCGCAAGATAAGAAGTTATATGTTAG
AGGCTTGACACCGAGAAACCAAGGAAATGAAGGCAAGTTTTATGGCACTAGATTGGATTCTGAAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTCCGACCAATCGTCAGCGTGCAACAACTCTTGGTCGACGTCTTGGATGGCAGTGGGCAGTTGCAGCGACAGGTCTGCAAGTTTTTGGCGATTCGGCAGTCCATTT
GCGTCTTCTAATTGTTTCAAGCTATGGGTTTTTACTCTCCTTTGACTTTTCGACATGTGGATTCGCGGCCAGCACCCTTCCCTTCACGTTGCTCAGCGGTTCAGTAGGTA
GGTCTTTAATTTCCAGCAATTTCGTGCGATTTCGTTTGTGGGTAAGAGAAGAAGTTGCTGGCTTTGCACCATATGAGAGGAGAATCACTAAGCTTCTTAAAGTTGGAAAG
GACAAGAGAGCACTAAAAGTGGCTAGGAGAAAGTTGGGAACTCACAAGAGAGCCAAGAAGAAGAGAGGAGATGTCCAGTGTTCTTCGCAAGATAAGAAGTTATATGTTAG
AGGCTTGACACCGAGAAACCAAGGAAATGAAGGCAAGTTTTATGGCACTAGATTGGATTCTGAAGCTTGA
Protein sequenceShow/hide protein sequence
MIPTNRQRATTLGRRLGWQWAVAATGLQVFGDSAVHLRLLIVSSYGFLLSFDFSTCGFAASTLPFTLLSGSVGRSLISSNFVRFRLWVREEVAGFAPYERRITKLLKVGK
DKRALKVARRKLGTHKRAKKKRGDVQCSSQDKKLYVRGLTPRNQGNEGKFYGTRLDSEA