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Spg037110 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037110
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionubiquitin-conjugating enzyme 5
Genome locationscaffold1:50942277..50950794
RNA-Seq ExpressionSpg037110
SyntenySpg037110
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsIPR011032 - GroES-like superfamily
IPR013154 - Alcohol dehydrogenase, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570351.1 E3 ubiquitin-protein ligase BRE1-like 2, partial [Cucurbita argyrosperma subsp. sororia]4.2e-1548.76Show/hide
Query:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET
        +R Q  R    + AK++     ++D A   ++  +S +++  EH+L +     N I         D   EDI GEFHVMAS LSKEMGMMESQLKRWKET
Subjt:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET

Query:  THEVVSVREKVQALETLLVGK
         HE V+VREKVQALETLL+ K
Subjt:  THEVVSVREKVQALETLLVGK

KAG7010233.1 E3 ubiquitin-protein ligase BRE1-like 2 [Cucurbita argyrosperma subsp. argyrosperma]4.2e-1548.76Show/hide
Query:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET
        +R Q  R    + AK++     ++D A   ++  +S +++  EH+L +     N I         D   EDI GEFHVMAS LSKEMGMMESQLKRWKET
Subjt:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET

Query:  THEVVSVREKVQALETLLVGK
         HE V+VREKVQALETLL+ K
Subjt:  THEVVSVREKVQALETLLVGK

XP_022943633.1 E3 ubiquitin-protein ligase BRE1-like 2 isoform X2 [Cucurbita moschata]4.2e-1548.76Show/hide
Query:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET
        +R Q  R    + AK++     ++D A   ++  +S +++  EH+L +     N I         D   EDI GEFHVMAS LSKEMGMMESQLKRWKET
Subjt:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET

Query:  THEVVSVREKVQALETLLVGK
         HE V+VREKVQALETLL+ K
Subjt:  THEVVSVREKVQALETLLVGK

XP_023513143.1 E3 ubiquitin-protein ligase BRE1-like 2 isoform X2 [Cucurbita pepo subsp. pepo]4.2e-1548.76Show/hide
Query:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET
        +R Q  R    + AK++     ++D A   ++  +S +++  EH+L +     N I         D   EDI GEFHVMAS LSKEMGMMESQLKRWKET
Subjt:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET

Query:  THEVVSVREKVQALETLLVGK
         HE V+VREKVQALETLL+ K
Subjt:  THEVVSVREKVQALETLLVGK

XP_023513144.1 E3 ubiquitin-protein ligase BRE1-like 2 isoform X3 [Cucurbita pepo subsp. pepo]4.2e-1548.76Show/hide
Query:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET
        +R Q  R    + AK++     ++D A   ++  +S +++  EH+L +     N I         D   EDI GEFHVMAS LSKEMGMMESQLKRWKET
Subjt:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET

Query:  THEVVSVREKVQALETLLVGK
         HE V+VREKVQALETLL+ K
Subjt:  THEVVSVREKVQALETLLVGK

TrEMBL top hitse value%identityAlignment
A0A6J1DII2 E3 ubiquitin protein ligase7.7e-1556.04Show/hide
Query:  AIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI-DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKETTHEVVSVREKVQALETLLVGK
        +ID +  R+E     LQ+    K      +   + D   EDI  EFHVMAS LSKEMGMME+Q+KRWKET HE VS+REKVQALETLL GK
Subjt:  AIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI-DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKETTHEVVSVREKVQALETLLVGK

A0A6J1FTK1 E3 ubiquitin protein ligase2.0e-1548.76Show/hide
Query:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET
        +R Q  R    + AK++     ++D A   ++  +S +++  EH+L +     N I         D   EDI GEFHVMAS LSKEMGMMESQLKRWKET
Subjt:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET

Query:  THEVVSVREKVQALETLLVGK
         HE V+VREKVQALETLL+ K
Subjt:  THEVVSVREKVQALETLLVGK

A0A6J1FX78 E3 ubiquitin protein ligase2.0e-1548.76Show/hide
Query:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET
        +R Q  R    + AK++     ++D A   ++  +S +++  EH+L +     N I         D   EDI GEFHVMAS LSKEMGMMESQLKRWKET
Subjt:  ERPQDARHMVVMQAKVDYRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI---------DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKET

Query:  THEVVSVREKVQALETLLVGK
         HE V+VREKVQALETLL+ K
Subjt:  THEVVSVREKVQALETLLVGK

A0A6J1JEQ0 E3 ubiquitin protein ligase4.5e-1557.14Show/hide
Query:  AIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI-DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKETTHEVVSVREKVQALETLLVGK
        +ID  + R+E    +LQ+    K  R   +   + D   EDI GEFHVMAS LSKEMGMMESQLKRWKET HE V+VREKVQALE  L+ K
Subjt:  AIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI-DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKETTHEVVSVREKVQALETLLVGK

A0A6J1JGQ7 E3 ubiquitin protein ligase4.5e-1557.14Show/hide
Query:  AIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI-DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKETTHEVVSVREKVQALETLLVGK
        +ID  + R+E    +LQ+    K  R   +   + D   EDI GEFHVMAS LSKEMGMMESQLKRWKET HE V+VREKVQALE  L+ K
Subjt:  AIDYAAERLEGANSMLQQNWEHKLPRHSPLANFI-DRLLEDITGEFHVMASTLSKEMGMMESQLKRWKETTHEVVSVREKVQALETLLVGK

SwissProt top hitse value%identityAlignment
A0A0C5DM37 CYP enzymes assisting alcohol dehydrogenase6.7e-0852.27Show/hide
Query:  VIECVGKDVNEVKEGDIVIPTFMAECRECVDCLSNKSNQCFELP
        V+ECVG+ V+E++EGD+VIPT++ EC EC +C S ++N C   P
Subjt:  VIECVGKDVNEVKEGDIVIPTFMAECRECVDCLSNKSNQCFELP

P16577 Ubiquitin-conjugating enzyme E2-23 kDa7.2e-1043.9Show/hide
Query:  DLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKS
        DL  LMMSDYKV+M++ G+ EF V F+GPK+SI                             Y+GGVWK+ VEL  AYPYKS
Subjt:  DLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKS

P42748 Ubiquitin-conjugating enzyme E2 45.0e-1145.12Show/hide
Query:  DLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKS
        D+  LMMSDYKVE ++ G+ EF V+FNGPK+S+                             Y+GGVWKI VELP AYPYKS
Subjt:  DLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKS

P42749 Ubiquitin-conjugating enzyme E2 57.7e-1248.78Show/hide
Query:  DLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKS
        DL  LMMSDYKVEM++ G+ EF V+F+GPK+SI                             YEGGVWKI VELP AYPYKS
Subjt:  DLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKS

Q9FH04 Alcohol dehydrogenase-like 75.5e-1047.06Show/hide
Query:  WKIHVELPHAYPYKSYVDEL-VIECVGKDVNEVKEGDIVIPTFMAECRECVDCLSNKSNQCFELPFNI
        WK+ V  P  +P     + + V+E VG++V EV EGD V+PTFM +C +CVDC S+KSN C + PF +
Subjt:  WKIHVELPHAYPYKSYVDEL-VIECVGKDVNEVKEGDIVIPTFMAECRECVDCLSNKSNQCFELPFNI

Arabidopsis top hitse value%identityAlignment
AT1G55250.1 histone mono-ubiquitination 21.4e-0855.77Show/hide
Query:  EDITGEFHVMASTLSKEMGMMESQLKRWKETTHEVVSVREKVQALETLLVGK
        +DI  EF  MASTLSKEM MME+QLKRWK+T  + + +RE+ Q+L   L  K
Subjt:  EDITGEFHVMASTLSKEMGMMESQLKRWKETTHEVVSVREKVQALETLLVGK

AT1G63800.1 ubiquitin-conjugating enzyme 55.5e-1348.78Show/hide
Query:  DLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKS
        DL  LMMSDYKVEM++ G+ EF V+F+GPK+SI                             YEGGVWKI VELP AYPYKS
Subjt:  DLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKS

AT2G46030.1 ubiquitin-conjugating enzyme 64.8e-0941.46Show/hide
Query:  DLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKS
        D+  LMMSDYKV+ V+  L  F V F+GP +S+                             Y+GGVWKI VELP AYPYKS
Subjt:  DLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKS

AT5G41340.1 ubiquitin conjugating enzyme 43.5e-1245.12Show/hide
Query:  DLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKS
        D+  LMMSDYKVE ++ G+ EF V+FNGPK+S+                             Y+GGVWKI VELP AYPYKS
Subjt:  DLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKS

AT5G42250.1 Zinc-binding alcohol dehydrogenase family protein3.9e-1147.06Show/hide
Query:  WKIHVELPHAYPYKSYVDEL-VIECVGKDVNEVKEGDIVIPTFMAECRECVDCLSNKSNQCFELPFNI
        WK+ V  P  +P     + + V+E VG++V EV EGD V+PTFM +C +CVDC S+KSN C + PF +
Subjt:  WKIHVELPHAYPYKSYVDEL-VIECVGKDVNEVKEGDIVIPTFMAECRECVDCLSNKSNQCFELPFNI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGGAATGACCCTAGGAAACCCTATCCATTTTTGGAGTTTGCGTTGTTCTGAATCCCATGCGCAAGCCCTCCGTAGGGTGATCGCTCCCAGGGCGACTCACAGGCG
GCACATGGGAATCTCACGGTTCAACCTAATGACCACCTCTAGTGTCTTCCCTACTATTCTTCGGGCCAAGAACGACTTGTGGGAGTCTATAGAGATAGGGAATGGGAAGG
GAATGCTTGAAGGTTCAAGCACTAGAGAGATATATGGACATGAAGATATTCCATGCAAGGAAAGGCCTCAAGATGCAAGACACATGGTGGTAATGCAAGCCAAAGTGGAT
TATAGGTTGTTCGTAGCTATAGATTATGCTGCTGAGCGACTGGAAGGAGCAAATTCTATGCTGCAGCAAAACTGGGAGCATAAACTGCCACGTCACAGCCCGTTAGCCAA
CTTCATTGACCGACTTCTAGAGGATATCACAGGAGAATTTCATGTTATGGCGTCAACTTTGTCTAAAGAAATGGGGATGATGGAATCTCAGCTAAAGCGTTGGAAGGAGA
CAACTCATGAAGTAGTTTCTGTACGTGAGAAAGTGCAGGCACTCGAGACTTTATTAGTTGGGAAGGTGGGGGTTTGGAATTTGGCATTGATAAATTTGTTAATGCCACTT
GTTGGTGTTGTGTTTGCTGATCTTGAGTGCTTGATGATGAGTGACTACAAAGTGGAGATGGTAGACGGTGGGCTTAGTGAATTTAATGTCAAATTCAACGGTCCAAAAGA
AAGTATTCCCTATTTTCATGCTTGCTTCTATTACAATATATTTCTAATTGCTCCGATGGGTAGGGTTGTTGCTGAGTACTGTATTGCAGACTTTTATGAAGGTGGAGTTT
GGAAAATCCACGTTGAACTACCTCACGCTTATCCATACAAGTCCTATGTTGATGAACTAGTGATTGAGTGTGTAGGAAAGGATGTTAATGAAGTTAAGGAAGGAGATATT
GTGATCCCAACCTTCATGGCCGAGTGCAGGGAGTGTGTGGATTGCTTATCAAATAAGAGCAATCAGTGTTTTGAACTCCCTTTCAACATTCATGTAAGAGATTTAGCATT
AAAGGACGTGTTTATCCAACTATTTTTCCCGTGGAAAGTTAACGGAAAGGTTGTGTCGGCCAATTTGGCAATTGAGGAATACTTCGTCTTCTTCGTCGTCGACTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGGAATGACCCTAGGAAACCCTATCCATTTTTGGAGTTTGCGTTGTTCTGAATCCCATGCGCAAGCCCTCCGTAGGGTGATCGCTCCCAGGGCGACTCACAGGCG
GCACATGGGAATCTCACGGTTCAACCTAATGACCACCTCTAGTGTCTTCCCTACTATTCTTCGGGCCAAGAACGACTTGTGGGAGTCTATAGAGATAGGGAATGGGAAGG
GAATGCTTGAAGGTTCAAGCACTAGAGAGATATATGGACATGAAGATATTCCATGCAAGGAAAGGCCTCAAGATGCAAGACACATGGTGGTAATGCAAGCCAAAGTGGAT
TATAGGTTGTTCGTAGCTATAGATTATGCTGCTGAGCGACTGGAAGGAGCAAATTCTATGCTGCAGCAAAACTGGGAGCATAAACTGCCACGTCACAGCCCGTTAGCCAA
CTTCATTGACCGACTTCTAGAGGATATCACAGGAGAATTTCATGTTATGGCGTCAACTTTGTCTAAAGAAATGGGGATGATGGAATCTCAGCTAAAGCGTTGGAAGGAGA
CAACTCATGAAGTAGTTTCTGTACGTGAGAAAGTGCAGGCACTCGAGACTTTATTAGTTGGGAAGGTGGGGGTTTGGAATTTGGCATTGATAAATTTGTTAATGCCACTT
GTTGGTGTTGTGTTTGCTGATCTTGAGTGCTTGATGATGAGTGACTACAAAGTGGAGATGGTAGACGGTGGGCTTAGTGAATTTAATGTCAAATTCAACGGTCCAAAAGA
AAGTATTCCCTATTTTCATGCTTGCTTCTATTACAATATATTTCTAATTGCTCCGATGGGTAGGGTTGTTGCTGAGTACTGTATTGCAGACTTTTATGAAGGTGGAGTTT
GGAAAATCCACGTTGAACTACCTCACGCTTATCCATACAAGTCCTATGTTGATGAACTAGTGATTGAGTGTGTAGGAAAGGATGTTAATGAAGTTAAGGAAGGAGATATT
GTGATCCCAACCTTCATGGCCGAGTGCAGGGAGTGTGTGGATTGCTTATCAAATAAGAGCAATCAGTGTTTTGAACTCCCTTTCAACATTCATGTAAGAGATTTAGCATT
AAAGGACGTGTTTATCCAACTATTTTTCCCGTGGAAAGTTAACGGAAAGGTTGTGTCGGCCAATTTGGCAATTGAGGAATACTTCGTCTTCTTCGTCGTCGACTCATAA
Protein sequenceShow/hide protein sequence
MLGMTLGNPIHFWSLRCSESHAQALRRVIAPRATHRRHMGISRFNLMTTSSVFPTILRAKNDLWESIEIGNGKGMLEGSSTREIYGHEDIPCKERPQDARHMVVMQAKVD
YRLFVAIDYAAERLEGANSMLQQNWEHKLPRHSPLANFIDRLLEDITGEFHVMASTLSKEMGMMESQLKRWKETTHEVVSVREKVQALETLLVGKVGVWNLALINLLMPL
VGVVFADLECLMMSDYKVEMVDGGLSEFNVKFNGPKESIPYFHACFYYNIFLIAPMGRVVAEYCIADFYEGGVWKIHVELPHAYPYKSYVDELVIECVGKDVNEVKEGDI
VIPTFMAECRECVDCLSNKSNQCFELPFNIHVRDLALKDVFIQLFFPWKVNGKVVSANLAIEEYFVFFVVDS