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Spg037140 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037140
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionDEAD-box ATP-dependent RNA helicase 31-like
Genome locationscaffold1:51397468..51404584
RNA-Seq ExpressionSpg037140
SyntenySpg037140
Gene Ontology termsGO:0006621 - protein retention in ER lumen (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003724 - RNA helicase activity (molecular function)
GO:0005524 - ATP binding (molecular function)
GO:0016787 - hydrolase activity (molecular function)
GO:0046923 - ER retention sequence binding (molecular function)
InterPro domainsIPR000133 - ER lumen protein retaining receptor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050997.1 DEAD-box ATP-dependent RNA helicase 31-like [Cucumis melo var. makuwa]6.6e-2291.94Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK
        +VRQISHIALRRDHE VNTIQEGSE+THAQVR+M IVAPLEKHFSLLYAILKEHIADDVDYK
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK

XP_008461517.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 31-like [Cucumis melo]6.6e-2291.94Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK
        +VRQISHIALRRDHE VNTIQEGSE+THAQVR+M IVAPLEKHFSLLYAILKEHIADDVDYK
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK

XP_011659146.2 DEAD-box ATP-dependent RNA helicase 31 [Cucumis sativus]1.5e-2190.32Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK
        +VRQISHIALRRDHE VNTI+EGSE+THAQVR+MQIVAPLEKHFSLLYAILKEHIA+DVDYK
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK

XP_022158751.1 DEAD-box ATP-dependent RNA helicase 31-like [Momordica charantia]2.5e-2190.32Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK
        +VRQI HIALRRDHE VNTI+EGSEETHAQVR+M IVAPLEKHFSLLYAILKEHIADDVDYK
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK

XP_038898727.1 DEAD-box ATP-dependent RNA helicase 31-like [Benincasa hispida]1.7e-2293.55Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK
        +VRQISHIALRRDHE VNTIQEGSE+THAQVR+MQIVAPLEKHFSLLYAILKEHIADDVDYK
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK

TrEMBL top hitse value%identityAlignment
A0A0A0K511 Uncharacterized protein7.1e-2290.32Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK
        +VRQISHIALRRDHE VNTI+EGSE+THAQVR+MQIVAPLEKHFSLLYAILKEHIA+DVDYK
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK

A0A1S3CG75 DEAD-box ATP-dependent RNA helicase 31-like3.2e-2291.94Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK
        +VRQISHIALRRDHE VNTIQEGSE+THAQVR+M IVAPLEKHFSLLYAILKEHIADDVDYK
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK

A0A5A7U9B3 DEAD-box ATP-dependent RNA helicase 31-like3.2e-2291.94Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK
        +VRQISHIALRRDHE VNTIQEGSE+THAQVR+M IVAPLEKHFSLLYAILKEHIADDVDYK
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK

A0A6J1E1W2 DEAD-box ATP-dependent RNA helicase 31-like1.2e-2190.32Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK
        +VRQI HIALRRDHE VNTI+EGSEETHAQVR+M IVAPLEKHFSLLYAILKEHIADDVDYK
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK

A0A6J1KW12 DEAD-box ATP-dependent RNA helicase 31-like1.6e-2190.32Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK
        +VRQISHIALRRDHE VNTIQEGSEETHAQVR+MQIVAPL+KHFSLLYA LKEHIA DVDYK
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK

SwissProt top hitse value%identityAlignment
Q0DBU5 DEAD-box ATP-dependent RNA helicase 318.7e-1759.38Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV
        +VRQ+ HIA++RD E VNT++EGSEETH+QV++M +VAPL+K FS+LY +L +HI+++VDYK +
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV

Q0JL73 DEAD-box ATP-dependent RNA helicase 261.9e-1659.38Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV
        +VRQISHIA++R ++ +NT++EG EETH+QV +M +VAPL+ HFS+LY +LK+HIA+D DYK +
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV

Q5ZBH5 DEAD-box ATP-dependent RNA helicase 257.3e-1654.69Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV
        +VRQISHIA++++++ +NT+++G EETHAQV +M ++APL+ HFS+LY +LK+H+A+D DYK +
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV

Q94C75 DEAD-box ATP-dependent RNA helicase 252.8e-1557.81Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV
        +VRQI H+AL+RDHE VN +QEG+ ETH +V +M ++A L++HFSLLY +LK+HI D+V YK +
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV

Q9FNM7 DEAD-box ATP-dependent RNA helicase 261.1e-1657.53Show/hide
Query:  FLSCAHWVLQVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV
        FL  A    +VRQI H+AL+RDHE +N +QEGS ETH +V +M ++A L++HFSLL+ +LKEHIAD+VDYK +
Subjt:  FLSCAHWVLQVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV

Arabidopsis top hitse value%identityAlignment
AT1G75760.1 ER lumen protein retaining receptor family protein3.5e-1394.44Show/hide
Query:  LPLMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQV
        L +MQNTKIVEPFTAHYVFALGIARFLSCAHWVLQV
Subjt:  LPLMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQV

AT4G38790.1 ER lumen protein retaining receptor family protein7.8e-1363.79Show/hide
Query:  SLVNHVVW----------VLP---LMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQV
        +++N + W          VLP   +MQNTKIVEPFTAHYVFALG+ARFLSCAHWVLQV
Subjt:  SLVNHVVW----------VLP---LMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQV

AT5G08610.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein8.0e-1857.53Show/hide
Query:  FLSCAHWVLQVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV
        FL  A    +VRQI H+AL+RDHE +N +QEGS ETH +V +M ++A L++HFSLL+ +LKEHIAD+VDYK +
Subjt:  FLSCAHWVLQVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV

AT5G08620.1 DEA(D/H)-box RNA helicase family protein2.0e-1657.81Show/hide
Query:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV
        +VRQI H+AL+RDHE VN +QEG+ ETH +V +M ++A L++HFSLLY +LK+HI D+V YK +
Subjt:  QVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV

AT5G63630.1 P-loop containing nucleoside triphosphate hydrolases superfamily protein4.4e-1656.16Show/hide
Query:  FLSCAHWVLQVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV
        FL  A    +VRQI  +ALRRDHE VN + EG+ ETH QVR+M ++A L++HFSLLY +L+EHI  +VDYK +
Subjt:  FLSCAHWVLQVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYKEV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTAGTTTTGGTTTCCCTTGTAAATCATGTGGTTTGGGTGTTGCCCCTGATGCAGAACACTAAGATTGTTGAACCGTTTACTGCACATTATGTGTTTGCATTGGGTAT
TGCAAGATTCCTTAGCTGCGCTCATTGGGTTCTCCAGGTTCGCCAAATCAGTCACATTGCTTTGAGAAGAGATCATGAATCTGTCAATACAATTCAAGAGGGCAGTGAGG
AGACACATGCACAGGTGAGAGAAATGCAAATAGTTGCTCCATTGGAGAAGCATTTTAGTCTACTCTATGCTATTCTTAAAGAACATATTGCTGATGACGTTGACTATAAG
GAAGTTCCTAGCTATTATTCGGTCATTGGACAACAAGTATTCGAGGCCGTTGGGTGCCAATCAGATAGCACAAGCTTCGAAGCTGTTCCAGTAATTGCTCGGCTTGAAAC
TACTGTAACTTTGGCAAGTTTCGATGGGGGCATTTCATTGAGAATGGGATGCGGAATGGAGAAGCTCAGAGAAACGAAGCTCGCCATGAAAGCAAATACGAATTCTGAAA
CCCCCATCATACCACCCATTGTAGAATCCAACATTGCAAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTAGTTTTGGTTTCCCTTGTAAATCATGTGGTTTGGGTGTTGCCCCTGATGCAGAACACTAAGATTGTTGAACCGTTTACTGCACATTATGTGTTTGCATTGGGTAT
TGCAAGATTCCTTAGCTGCGCTCATTGGGTTCTCCAGGTTCGCCAAATCAGTCACATTGCTTTGAGAAGAGATCATGAATCTGTCAATACAATTCAAGAGGGCAGTGAGG
AGACACATGCACAGGTGAGAGAAATGCAAATAGTTGCTCCATTGGAGAAGCATTTTAGTCTACTCTATGCTATTCTTAAAGAACATATTGCTGATGACGTTGACTATAAG
GAAGTTCCTAGCTATTATTCGGTCATTGGACAACAAGTATTCGAGGCCGTTGGGTGCCAATCAGATAGCACAAGCTTCGAAGCTGTTCCAGTAATTGCTCGGCTTGAAAC
TACTGTAACTTTGGCAAGTTTCGATGGGGGCATTTCATTGAGAATGGGATGCGGAATGGAGAAGCTCAGAGAAACGAAGCTCGCCATGAAAGCAAATACGAATTCTGAAA
CCCCCATCATACCACCCATTGTAGAATCCAACATTGCAAATTAG
Protein sequenceShow/hide protein sequence
MLVLVSLVNHVVWVLPLMQNTKIVEPFTAHYVFALGIARFLSCAHWVLQVRQISHIALRRDHESVNTIQEGSEETHAQVREMQIVAPLEKHFSLLYAILKEHIADDVDYK
EVPSYYSVIGQQVFEAVGCQSDSTSFEAVPVIARLETTVTLASFDGGISLRMGCGMEKLRETKLAMKANTNSETPIIPPIVESNIAN