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Spg037149 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037149
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase, RNA-dependent DNA polymerase
Genome locationscaffold1:50446633..50447145
RNA-Seq ExpressionSpg037149
SyntenySpg037149
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067279.1 uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa]5.9e-3549.7Show/hide
Query:  NSNEISVVMPRTTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEAS
        N+  ISV    TT+F++P LNQ+LNQ+T+IKLDR N+LLWK LALPIL SYKL  HL G   CL K +       +S   + G          +  + +S
Subjt:  NSNEISVVMPRTTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEAS

Query:  ESTVEEINPQYEQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYL
         + V  +NP+YE+W+  D LLLGWLYNSMTPEV  Q+MGF +A++LW   Q+LFG+QS A+ED+L
Subjt:  ESTVEEINPQYEQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYL

XP_016900937.1 PREDICTED: uncharacterized protein LOC107991116 [Cucumis melo]5.9e-3549.7Show/hide
Query:  NSNEISVVMPRTTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEAS
        N+  ISV    TT+F++P LNQ+LNQ+T+IKLDR N+LLWK LALPIL SYKL  HL G   CL K +       +S   + G          +  + +S
Subjt:  NSNEISVVMPRTTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEAS

Query:  ESTVEEINPQYEQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYL
         + V  +NP+YE+W+  D LLLGWLYNSMTPEV  Q+MGF +A++LW   Q+LFG+QS A+ED+L
Subjt:  ESTVEEINPQYEQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYL

XP_016902203.1 PREDICTED: uncharacterized protein LOC107991581 isoform X3 [Cucumis melo]7.7e-3552.9Show/hide
Query:  TTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASESTVEEINPQY
        +  FS+PPLNQ+LNQ+T++KLDR N+LLWK LALPIL  YKLEGHL+    C S +V      + +S S+    T T    +A    +S  T   +NP +
Subjt:  TTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASESTVEEINPQY

Query:  EQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR
        EQWV  D LLLGWLYNSMTP+VA Q+MGF + ++LW   Q+ FGVQS AEED+LR
Subjt:  EQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]2.4e-3658.55Show/hide
Query:  FSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASESTVEEINPQYEQW
        F+SPPLNQLLNQITSIK+DR NFLLW+NLALPIL SYKL  +L+G K C               P +    T TP  IE +TS  S  T   +NP YE W
Subjt:  FSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASESTVEEINPQYEQW

Query:  VAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR
        + +D+LLLGWLYNSM  +VA QVMGF +++ELWT VQELFGVQS AE DYL+
Subjt:  VAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR

XP_031745012.1 uncharacterized protein LOC116405217 [Cucumis sativus]2.4e-3648.48Show/hide
Query:  SNEISVVMPRTTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASE
        +N +S++   TTNFS+PPLNQ+LNQ+ S+KLDR N+LLW+ LALPIL SYKL+GHL+    C  K++                      I     + +  
Subjt:  SNEISVVMPRTTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASE

Query:  STVEEINPQYEQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR
        +T + +NP+++QWV  D LLLGW+YNSMTPEVA Q+MGF +A++LW  +Q+LFGVQ  AEED+LR
Subjt:  STVEEINPQYEQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR

TrEMBL top hitse value%identityAlignment
A0A1S4DY80 uncharacterized protein LOC1079911162.8e-3549.7Show/hide
Query:  NSNEISVVMPRTTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEAS
        N+  ISV    TT+F++P LNQ+LNQ+T+IKLDR N+LLWK LALPIL SYKL  HL G   CL K +       +S   + G          +  + +S
Subjt:  NSNEISVVMPRTTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEAS

Query:  ESTVEEINPQYEQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYL
         + V  +NP+YE+W+  D LLLGWLYNSMTPEV  Q+MGF +A++LW   Q+LFG+QS A+ED+L
Subjt:  ESTVEEINPQYEQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYL

A0A1S4E1U6 uncharacterized protein LOC107991581 isoform X13.7e-3552.9Show/hide
Query:  TTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASESTVEEINPQY
        +  FS+PPLNQ+LNQ+T++KLDR N+LLWK LALPIL  YKLEGHL+    C S +V      + +S S+    T T    +A    +S  T   +NP +
Subjt:  TTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASESTVEEINPQY

Query:  EQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR
        EQWV  D LLLGWLYNSMTP+VA Q+MGF + ++LW   Q+ FGVQS AEED+LR
Subjt:  EQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR

A0A1S4E1U9 uncharacterized protein LOC107991581 isoform X43.7e-3552.9Show/hide
Query:  TTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASESTVEEINPQY
        +  FS+PPLNQ+LNQ+T++KLDR N+LLWK LALPIL  YKLEGHL+    C S +V      + +S S+    T T    +A    +S  T   +NP +
Subjt:  TTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASESTVEEINPQY

Query:  EQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR
        EQWV  D LLLGWLYNSMTP+VA Q+MGF + ++LW   Q+ FGVQS AEED+LR
Subjt:  EQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR

A0A5A7VPY0 Uncharacterized protein2.8e-3549.7Show/hide
Query:  NSNEISVVMPRTTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEAS
        N+  ISV    TT+F++P LNQ+LNQ+T+IKLDR N+LLWK LALPIL SYKL  HL G   CL K +       +S   + G          +  + +S
Subjt:  NSNEISVVMPRTTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEAS

Query:  ESTVEEINPQYEQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYL
         + V  +NP+YE+W+  D LLLGWLYNSMTPEV  Q+MGF +A++LW   Q+LFG+QS A+ED+L
Subjt:  ESTVEEINPQYEQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYL

A0A6J1DCW4 uncharacterized protein LOC1110195981.2e-3658.55Show/hide
Query:  FSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASESTVEEINPQYEQW
        F+SPPLNQLLNQITSIK+DR NFLLW+NLALPIL SYKL  +L+G K C               P +    T TP  IE +TS  S  T   +NP YE W
Subjt:  FSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASESTVEEINPQYEQW

Query:  VAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR
        + +D+LLLGWLYNSM  +VA QVMGF +++ELWT VQELFGVQS AE DYL+
Subjt:  VAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTAGCGTCAATTCCAACGAGATCTCAGTCGTAATGCCTAGAACAACCAACTTCAGCAGTCCTCCATTAAATCAGCTGCTAAATCAAATTACTTCTATAAAATTGGA
TAGAAGCAATTTTCTCCTCTGGAAGAACTTAGCGCTGCCAATACTTTGGAGCTACAAATTGGAGGGACATCTCTCAGGTTCTAAATCTTGTCTTTCCAAATACGTCCGAG
CCTTTGCTGCACAGATTGATTCTTCTCCTTCATCGGTGGGAGCAGGTACTACAACTCCAAATATCATTGAAGCCGCGACAAGTGAAGCTTCAGAGTCCACTGTCGAAGAA
ATCAACCCACAATATGAGCAATGGGTTGCGATGGATCAATTGCTTCTAGGTTGGTTGTACAATTCGATGACTCCAGAGGTAGCTACACAGGTGATGGGATTTGAAAGTGC
TCAAGAACTATGGACCGATGTACAAGAACTTTTTGGAGTTCAATCTTGTGCGGAAGAAGATTATCTTCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGACTAGCGTCAATTCCAACGAGATCTCAGTCGTAATGCCTAGAACAACCAACTTCAGCAGTCCTCCATTAAATCAGCTGCTAAATCAAATTACTTCTATAAAATTGGA
TAGAAGCAATTTTCTCCTCTGGAAGAACTTAGCGCTGCCAATACTTTGGAGCTACAAATTGGAGGGACATCTCTCAGGTTCTAAATCTTGTCTTTCCAAATACGTCCGAG
CCTTTGCTGCACAGATTGATTCTTCTCCTTCATCGGTGGGAGCAGGTACTACAACTCCAAATATCATTGAAGCCGCGACAAGTGAAGCTTCAGAGTCCACTGTCGAAGAA
ATCAACCCACAATATGAGCAATGGGTTGCGATGGATCAATTGCTTCTAGGTTGGTTGTACAATTCGATGACTCCAGAGGTAGCTACACAGGTGATGGGATTTGAAAGTGC
TCAAGAACTATGGACCGATGTACAAGAACTTTTTGGAGTTCAATCTTGTGCGGAAGAAGATTATCTTCGCTAG
Protein sequenceShow/hide protein sequence
MTSVNSNEISVVMPRTTNFSSPPLNQLLNQITSIKLDRSNFLLWKNLALPILWSYKLEGHLSGSKSCLSKYVRAFAAQIDSSPSSVGAGTTTPNIIEAATSEASESTVEE
INPQYEQWVAMDQLLLGWLYNSMTPEVATQVMGFESAQELWTDVQELFGVQSCAEEDYLR