; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037222 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037222
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold7:36947704..36949186
RNA-Seq ExpressionSpg037222
SyntenySpg037222
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EXB93492.1 hypothetical protein L484_006967 [Morus notabilis]2.1e-0732.65Show/hide
Query:  GQTWGKWDDHRAARTLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLCCASGL
        G  W  W   R + T   + L      W H+++ R+M ++H   +  +R IL+YC+MKG PL++GR++ + +   A +  G ++ P L+T+LC A G+
Subjt:  GQTWGKWDDHRAARTLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLCCASGL

KAE8661093.1 hypothetical protein F3Y22_tig00116939pilonHSYRG00213 [Hibiscus syriacus]6.1e-0733.71Show/hide
Query:  KWDDHRAAR-TLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLC
        +W+  + +R ++  + L   A  W H++KN++M T+H+ T+SL R++L++ IM   P+D+G I+V+ +     K   A+  P L+T LC
Subjt:  KWDDHRAAR-TLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLC

KAE8676815.1 hypothetical protein F3Y22_tig00111582pilonHSYRG01273 [Hibiscus syriacus]7.2e-0833.71Show/hide
Query:  KWDDHRAAR-TLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLC
        +W+  + +R ++  + L   A  W H++K+++M T+H+ T+SL R++L++ IM   P+D+GRI+V+ +    +K   A+  P L+T LC
Subjt:  KWDDHRAAR-TLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLC

PON62892.1 hypothetical protein PanWU01x14_135680 [Parasponia andersonii]7.2e-0835.71Show/hide
Query:  RAARTLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLCC
        + A T     L+  A  W H++K+R++ TTH  T+S +RV+L+Y ++ G  +++G+I+ + +   A +  GA+F P L+TR+CC
Subjt:  RAARTLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLCC

XP_024995361.1 formin-like protein 3 [Cynara cardunculus var. scolymus]1.6e-0733.72Show/hide
Query:  WDDHRAARTLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRL
        W     AR LK+Q L  EA  W +++++ I   +HD  L L+RV+++YCI++  P D+GR++   ++    +  G +  P L+ RL
Subjt:  WDDHRAARTLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRL

TrEMBL top hitse value%identityAlignment
A0A2P5CPE8 Uncharacterized protein3.5e-0835.71Show/hide
Query:  RAARTLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLCC
        + A T     L+  A  W H++K+R++ TTH  T+S +RV+L+Y ++ G  +++G+I+ + +   A +  GA+F P L+TR+CC
Subjt:  RAARTLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLCC

A0A6A2WM54 Uncharacterized protein3.0e-0733.71Show/hide
Query:  KWDDHRAAR-TLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLC
        +W+  + +R ++  + L   A  W H++KN++M T+H+ T+SL R++L++ IM   P+D+G I+V+ +     K   A+  P L+T LC
Subjt:  KWDDHRAAR-TLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLC

A0A6A2Y697 Reverse transcriptase domain-containing protein3.5e-0833.71Show/hide
Query:  KWDDHRAAR-TLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLC
        +W+  + +R ++  + L   A  W H++K+++M T+H+ T+SL R++L++ IM   P+D+GRI+V+ +    +K   A+  P L+T LC
Subjt:  KWDDHRAAR-TLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLC

W9RBS1 Uncharacterized protein3.9e-0736.11Show/hide
Query:  ATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLCCAS
        A  W H++ +R++ +TH  T+S  R IL+Y ++ G P+++GR+++  +R  A K KG ++ P L++ LC  S
Subjt:  ATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLCCAS

W9S7D3 Uncharacterized protein1.0e-0732.65Show/hide
Query:  GQTWGKWDDHRAARTLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLCCASGL
        G  W  W   R + T   + L      W H+++ R+M ++H   +  +R IL+YC+MKG PL++GR++ + +   A +  G ++ P L+T+LC A G+
Subjt:  GQTWGKWDDHRAARTLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCPGLVTRLCCASGL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCGACTCGCAAAACCTTTCCATCTCCGGCTATGCAGACGACGCACCTCCATCATCGTGGGAGGTGGAAGGGCTACATAGGGATGTCATCATCTCCTCTGACGAAGA
CGATGACAACCAACAAAATGATGACCGCATGGACGAAGACGAACCAGAGGTCATCGACGGAGAACGGCCTGTCGAGAGCATAGAAACTCAGCTCACCACCGCTCGATCAT
CCTCCGGCGCAATCGACACAGAAGTACTCGACTTAGCTCCACTGGACACCTCCACCTTCAACGTTCAGCCAGTGACTCTCCAACCAGCCCAAAATATCCCTGTTCCCACC
AATTCTCTGTCCCTGCTAGGGGAGTTCGGCGAAGAAGGCGACGCAATTCGCCTGCGAGAAGATAGGGAGCGAGCTGCGGCAGAAGAAGCTGTTCGCAGGGCCGCCGCAGA
AGAAGAAGCGGCCAAAGACCGAGCTGCCGCAGAATTCGCCGCAGCAAGTCTGGCAGAATTTGCGGCAGCCCTGAGCTCTCCAATGTGTAGGTCAGAATCCCCCGACTCGG
AAGACGATTTACCCCTCAACCATCGCTGCAACATACAGCCAATGGGGGTAGTCATCCGAGAGCCCTCCGAAAGACCTGCAGCGGCCCCAACAAAGAAAAGAAAAGTGCCC
ACCGCATCCAAAGGAAAAGGAAAAGAAAAAGTGGGTGCAGTGGTTGAGGACAACGGGAATACTTTTTGCGGTGGCCAGACCTGGGGCAAGTGGGACGACCATAGAGCTGC
GAGGACCCTGAAGTCACAACTACTAGACTTTGAGGCCACCTGCTGGATGCACTGGGTGAAGAATCGCATCATGGCCACAACGCATGATGCCACGTTGAGTCTTCAACGGG
TGATTCTCGTCTACTGCATCATGAAGGGAACCCCACTCGATTTAGGCAGAATCCTCGTCAAAACATTGCGTCAAACTGCCACGAAACCCAAGGGTGCAATGTTTTGCCCA
GGCCTTGTCACCCGTCTATGTTGCGCATCAGGTCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCCGACTCGCAAAACCTTTCCATCTCCGGCTATGCAGACGACGCACCTCCATCATCGTGGGAGGTGGAAGGGCTACATAGGGATGTCATCATCTCCTCTGACGAAGA
CGATGACAACCAACAAAATGATGACCGCATGGACGAAGACGAACCAGAGGTCATCGACGGAGAACGGCCTGTCGAGAGCATAGAAACTCAGCTCACCACCGCTCGATCAT
CCTCCGGCGCAATCGACACAGAAGTACTCGACTTAGCTCCACTGGACACCTCCACCTTCAACGTTCAGCCAGTGACTCTCCAACCAGCCCAAAATATCCCTGTTCCCACC
AATTCTCTGTCCCTGCTAGGGGAGTTCGGCGAAGAAGGCGACGCAATTCGCCTGCGAGAAGATAGGGAGCGAGCTGCGGCAGAAGAAGCTGTTCGCAGGGCCGCCGCAGA
AGAAGAAGCGGCCAAAGACCGAGCTGCCGCAGAATTCGCCGCAGCAAGTCTGGCAGAATTTGCGGCAGCCCTGAGCTCTCCAATGTGTAGGTCAGAATCCCCCGACTCGG
AAGACGATTTACCCCTCAACCATCGCTGCAACATACAGCCAATGGGGGTAGTCATCCGAGAGCCCTCCGAAAGACCTGCAGCGGCCCCAACAAAGAAAAGAAAAGTGCCC
ACCGCATCCAAAGGAAAAGGAAAAGAAAAAGTGGGTGCAGTGGTTGAGGACAACGGGAATACTTTTTGCGGTGGCCAGACCTGGGGCAAGTGGGACGACCATAGAGCTGC
GAGGACCCTGAAGTCACAACTACTAGACTTTGAGGCCACCTGCTGGATGCACTGGGTGAAGAATCGCATCATGGCCACAACGCATGATGCCACGTTGAGTCTTCAACGGG
TGATTCTCGTCTACTGCATCATGAAGGGAACCCCACTCGATTTAGGCAGAATCCTCGTCAAAACATTGCGTCAAACTGCCACGAAACCCAAGGGTGCAATGTTTTGCCCA
GGCCTTGTCACCCGTCTATGTTGCGCATCAGGTCTCTAG
Protein sequenceShow/hide protein sequence
MSDSQNLSISGYADDAPPSSWEVEGLHRDVIISSDEDDDNQQNDDRMDEDEPEVIDGERPVESIETQLTTARSSSGAIDTEVLDLAPLDTSTFNVQPVTLQPAQNIPVPT
NSLSLLGEFGEEGDAIRLREDRERAAAEEAVRRAAAEEEAAKDRAAAEFAAASLAEFAAALSSPMCRSESPDSEDDLPLNHRCNIQPMGVVIREPSERPAAAPTKKRKVP
TASKGKGKEKVGAVVEDNGNTFCGGQTWGKWDDHRAARTLKSQLLDFEATCWMHWVKNRIMATTHDATLSLQRVILVYCIMKGTPLDLGRILVKTLRQTATKPKGAMFCP
GLVTRLCCASGL