; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037226 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037226
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionRT_RNaseH_2 domain-containing protein
Genome locationscaffold7:36794723..36798770
RNA-Seq ExpressionSpg037226
SyntenySpg037226
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON35554.1 hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii]4.8e-0838.26Show/hide
Query:  VRFNNDLARAKYLEMLK-KDLLFERGFRVD-------LPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFN
        V+F  + A  +Y   ++ + L  E+GF +D       LP F+   IT H W QFCA PE     +VREFY  + D       VRGV V WS  AIN++F 
Subjt:  VRFNNDLARAKYLEMLK-KDLLFERGFRVD-------LPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFN

Query:  LQH--IPHAEFNEMV
        L      H+EF E +
Subjt:  LQH--IPHAEFNEMV

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]5.0e-1325.41Show/hide
Query:  VRFNNDLARAKYLEMLK-KDLLFERGFRVD-------LPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFN
        V+F  + A  +Y   ++ + L  E+GF +D       LP F+   IT H W QFCA PE     +VREFY  + D E     VRGV V WS  AIN++F 
Subjt:  VRFNNDLARAKYLEMLK-KDLLFERGFRVD-------LPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFN

Query:  LQH--IPHAEFNEMV-----------VAPSNDQLNAA-----------------------------------VREDRVLMVFALLRSLSIDVAGMNAHES
        L      H+EF + +           VA +  + N +                                   V +DR+L++ ++L   SI+V  M   E 
Subjt:  LQH--IPHAEFNEMV-----------VAPSNDQLNAA-----------------------------------VREDRVLMVFALLRSLSIDVAGMNAHES

Query:  EDAILLNKGIIDTPNL-ARLQRTQEA---------HQGGLVCGIH----------------------------------QILEQLALSASRQE-------
                G +  P+L  RL R   A         H  G +  I                                   Q L+ L    S+QE       
Subjt:  EDAILLNKGIIDTPNL-ARLQRTQEA---------HQGGLVCGIH----------------------------------QILEQLALSASRQE-------

Query:  ----YAERQAQTYWTYSKRRDATLRRDLQSNFSKQYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQGHKN
            +  +Q Q +W YSK RD  L++ LQ+NF++    FP FP ++         ++ E E E ++   N
Subjt:  ----YAERQAQTYWTYSKRRDATLRRDLQSNFSKQYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQGHKN

PON78020.1 hypothetical protein PanWU01x14_023740 [Parasponia andersonii]1.8e-0724.57Show/hide
Query:  IVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFNLQH--IPHAEFNEMV-----------VAPSNDQLNAA---------------------------
        +VREFY  + D E     VRGV V WS  AIN++F L      H+EF E +           VA +  + N +                           
Subjt:  IVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFNLQH--IPHAEFNEMV-----------VAPSNDQLNAA---------------------------

Query:  --------VREDRVLMVFALLRSLSIDVAGMNAHESEDAILLNKGIIDTPNL-ARLQRT-------QEAHQGGLVCGIH---------------------
                V +DR+L++ ++L   SI+V  M   E         G +  P+L  RL R        ++ H  G +  I                      
Subjt:  --------VREDRVLMVFALLRSLSIDVAGMNAHESEDAILLNKGIIDTPNL-ARLQRT-------QEAHQGGLVCGIH---------------------

Query:  -------------QILEQLALSASRQEYAERQAQTYWTYSKRRDATLRRDLQSNFSKQYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQGHKN
                     Q L+ L    S+QE+  +Q Q +W YSK RD  L++ LQ+NF++    FP FP ++         ++ E E E ++   N
Subjt:  -------------QILEQLALSASRQEYAERQAQTYWTYSKRRDATLRRDLQSNFSKQYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQGHKN

PON85987.1 hypothetical protein TorRG33x02_181920, partial [Trema orientale]6.3e-0835.83Show/hide
Query:  VRFNNDLARAKYLEMLKKD-LLFERGFRVDLPH------FLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFNL
        V+F  + A  +Y E ++K  L  E+GF ++         F+   I  H W QFCA PE     +VREFY  + D E     VRGV V W+  AIN++F L
Subjt:  VRFNNDLARAKYLEMLKKD-LLFERGFRVDLPH------FLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFNL

Query:  QHIPHAEFNEMVVAPSNDQL
           P  E +E V   +  +L
Subjt:  QHIPHAEFNEMVVAPSNDQL

PON90635.1 hypothetical protein TorRG33x02_134920 [Trema orientale]1.8e-0739Show/hide
Query:  VRFNNDLARAKYLEMLKKDLL-FERGFR------VDLPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFNL
        V+F+++ A A+Y E +K   L  E+GF       +  P F+   I  H W  FCA  E     +VREFY  + D E     V+GV V WS  AIN+LF L
Subjt:  VRFNNDLARAKYLEMLKKDLL-FERGFR------VDLPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFNL

TrEMBL top hitse value%identityAlignment
A0A2P5AGA5 Uncharacterized protein (Fragment)2.3e-0838.26Show/hide
Query:  VRFNNDLARAKYLEMLK-KDLLFERGFRVD-------LPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFN
        V+F  + A  +Y   ++ + L  E+GF +D       LP F+   IT H W QFCA PE     +VREFY  + D       VRGV V WS  AIN++F 
Subjt:  VRFNNDLARAKYLEMLK-KDLLFERGFRVD-------LPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFN

Query:  LQH--IPHAEFNEMV
        L      H+EF E +
Subjt:  LQH--IPHAEFNEMV

A0A2P5BCG4 Uncharacterized protein (Fragment)2.4e-1325.41Show/hide
Query:  VRFNNDLARAKYLEMLK-KDLLFERGFRVD-------LPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFN
        V+F  + A  +Y   ++ + L  E+GF +D       LP F+   IT H W QFCA PE     +VREFY  + D E     VRGV V WS  AIN++F 
Subjt:  VRFNNDLARAKYLEMLK-KDLLFERGFRVD-------LPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFN

Query:  LQH--IPHAEFNEMV-----------VAPSNDQLNAA-----------------------------------VREDRVLMVFALLRSLSIDVAGMNAHES
        L      H+EF + +           VA +  + N +                                   V +DR+L++ ++L   SI+V  M   E 
Subjt:  LQH--IPHAEFNEMV-----------VAPSNDQLNAA-----------------------------------VREDRVLMVFALLRSLSIDVAGMNAHES

Query:  EDAILLNKGIIDTPNL-ARLQRTQEA---------HQGGLVCGIH----------------------------------QILEQLALSASRQE-------
                G +  P+L  RL R   A         H  G +  I                                   Q L+ L    S+QE       
Subjt:  EDAILLNKGIIDTPNL-ARLQRTQEA---------HQGGLVCGIH----------------------------------QILEQLALSASRQE-------

Query:  ----YAERQAQTYWTYSKRRDATLRRDLQSNFSKQYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQGHKN
            +  +Q Q +W YSK RD  L++ LQ+NF++    FP FP ++         ++ E E E ++   N
Subjt:  ----YAERQAQTYWTYSKRRDATLRRDLQSNFSKQYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQGHKN

A0A2P5DXM3 Uncharacterized protein8.8e-0824.57Show/hide
Query:  IVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFNLQH--IPHAEFNEMV-----------VAPSNDQLNAA---------------------------
        +VREFY  + D E     VRGV V WS  AIN++F L      H+EF E +           VA +  + N +                           
Subjt:  IVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFNLQH--IPHAEFNEMV-----------VAPSNDQLNAA---------------------------

Query:  --------VREDRVLMVFALLRSLSIDVAGMNAHESEDAILLNKGIIDTPNL-ARLQRT-------QEAHQGGLVCGIH---------------------
                V +DR+L++ ++L   SI+V  M   E         G +  P+L  RL R        ++ H  G +  I                      
Subjt:  --------VREDRVLMVFALLRSLSIDVAGMNAHESEDAILLNKGIIDTPNL-ARLQRT-------QEAHQGGLVCGIH---------------------

Query:  -------------QILEQLALSASRQEYAERQAQTYWTYSKRRDATLRRDLQSNFSKQYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQGHKN
                     Q L+ L    S+QE+  +Q Q +W YSK RD  L++ LQ+NF++    FP FP ++         ++ E E E ++   N
Subjt:  -------------QILEQLALSASRQEYAERQAQTYWTYSKRRDATLRRDLQSNFSKQYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQGHKN

A0A2P5EK98 Uncharacterized protein (Fragment)3.0e-0835.83Show/hide
Query:  VRFNNDLARAKYLEMLKKD-LLFERGFRVDLPH------FLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFNL
        V+F  + A  +Y E ++K  L  E+GF ++         F+   I  H W QFCA PE     +VREFY  + D E     VRGV V W+  AIN++F L
Subjt:  VRFNNDLARAKYLEMLKKD-LLFERGFRVDLPH------FLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFNL

Query:  QHIPHAEFNEMVVAPSNDQL
           P  E +E V   +  +L
Subjt:  QHIPHAEFNEMVVAPSNDQL

A0A2P5EYL5 Uncharacterized protein8.8e-0839Show/hide
Query:  VRFNNDLARAKYLEMLKKDLL-FERGFR------VDLPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFNL
        V+F+++ A A+Y E +K   L  E+GF       +  P F+   I  H W  FCA  E     +VREFY  + D E     V+GV V WS  AIN+LF L
Subjt:  VRFNNDLARAKYLEMLKKDLL-FERGFR------VDLPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVDWSPGAINSLFNL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACTGAAGACAAGAATAAAGAGAAGGAAGACACCGGAAGTGAGAGAGGCTAAGAGACGAAGAAGACAACAGCGAGCTGAGGTTGTAGAAGTTGTACGGAAAGTTGT
TAAAGACATTGCTGAAGAAGCGGTCGAGGAAGAACATCCGAAAGACCTTGAGGAAAAGAAAGATTCTGAACAAGGTGAACAACCAGTCGAAAATCCGCATGAGGAACAAA
AAAAGCAAGTAGAAGATGTGCAATGGCAAGGTAATGGTCAGGAGCAACAGACTCAAGAAGTTGTGTCGGAGATCCCACGTCGTCGCCGGCGTAAGCAAAAGGCGGGACGG
ATTAAGCAACGAGACAAGGGCAAAGGGGTTGCTGAAGCACCGGTAGAGACAGAAGAGACTGACATTGAGGAACCGAGTCTACCGTATGTGCGCTTCAACAATGATCTTGC
CAGAGCAAAATATCTAGAAATGCTGAAGAAGGACTTATTGTTTGAAAGGGGATTCCGTGTTGACTTGCCTCACTTCCTACGTGCTGGAATTACAAACCACGGATGGGATC
AGTTTTGCGCGAAGCCAGAATCGATGAATTCAAATATTGTCCGAGAATTCTACACAAAAATAGATGATCAAGAGGGATTCCAAGCCATGGTCCGAGGGGTAGCTGTCGAT
TGGAGCCCAGGGGCTATAAATTCTCTTTTCAACCTGCAGCATATTCCACATGCCGAATTTAATGAGATGGTGGTGGCACCATCTAATGATCAATTGAACGCGGCTGTCAG
AGAGGATAGAGTGCTTATGGTGTTTGCCCTTTTGCGATCCTTGAGTATAGATGTTGCAGGGATGAATGCCCATGAGTCCGAGGATGCTATTCTACTCAACAAGGGCATTA
TAGACACGCCCAATTTGGCTCGGCTTCAGCGCACACAGGAGGCTCACCAAGGTGGGCTAGTATGCGGCATCCACCAGATTTTAGAGCAACTGGCACTTTCGGCCAGTAGG
CAAGAGTATGCCGAAAGACAAGCTCAGACCTACTGGACCTATTCTAAGAGGAGGGATGCCACCCTAAGGAGGGACCTGCAATCCAATTTTTCAAAACAATATCAGGCCTT
CCCAGTTTTCCCCGATGACTTGTTTAATCCTTGGATTCCGCCGCCGCCAGTAGAAAGAGAGGAAGAGGAGGAAGATGAGCAAGGCCACAAAAATTATCTGCTGATGATTG
AGTTAAAGGTGGTGATTATCTATTCAATGCTGAAAGAATTATTTTGCTGCAACAGTGCTTGGTTTTGCAAAATGCTCAGCGACTTGAGGGAGCAAAATCCGTTATCCAGC
AAAGCAGGCAGCAAAACTGCCACGTGTGCCGCACGTGATTCATTAAATGAGGTGGCGTTAGCTGAATTAATCTCGGATTTTGGAAGCTTGGAGAGCCCTCCAGGAAGTAT
GTGTTTGAAGCTAAAGCTGAAGCAAGGGGAGAAAAGTGGATTTGAAGGCTTTGTTCGTGGAGATCGTGACGGGGACGTTCGGTTTCGGCCTACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCACTGAAGACAAGAATAAAGAGAAGGAAGACACCGGAAGTGAGAGAGGCTAAGAGACGAAGAAGACAACAGCGAGCTGAGGTTGTAGAAGTTGTACGGAAAGTTGT
TAAAGACATTGCTGAAGAAGCGGTCGAGGAAGAACATCCGAAAGACCTTGAGGAAAAGAAAGATTCTGAACAAGGTGAACAACCAGTCGAAAATCCGCATGAGGAACAAA
AAAAGCAAGTAGAAGATGTGCAATGGCAAGGTAATGGTCAGGAGCAACAGACTCAAGAAGTTGTGTCGGAGATCCCACGTCGTCGCCGGCGTAAGCAAAAGGCGGGACGG
ATTAAGCAACGAGACAAGGGCAAAGGGGTTGCTGAAGCACCGGTAGAGACAGAAGAGACTGACATTGAGGAACCGAGTCTACCGTATGTGCGCTTCAACAATGATCTTGC
CAGAGCAAAATATCTAGAAATGCTGAAGAAGGACTTATTGTTTGAAAGGGGATTCCGTGTTGACTTGCCTCACTTCCTACGTGCTGGAATTACAAACCACGGATGGGATC
AGTTTTGCGCGAAGCCAGAATCGATGAATTCAAATATTGTCCGAGAATTCTACACAAAAATAGATGATCAAGAGGGATTCCAAGCCATGGTCCGAGGGGTAGCTGTCGAT
TGGAGCCCAGGGGCTATAAATTCTCTTTTCAACCTGCAGCATATTCCACATGCCGAATTTAATGAGATGGTGGTGGCACCATCTAATGATCAATTGAACGCGGCTGTCAG
AGAGGATAGAGTGCTTATGGTGTTTGCCCTTTTGCGATCCTTGAGTATAGATGTTGCAGGGATGAATGCCCATGAGTCCGAGGATGCTATTCTACTCAACAAGGGCATTA
TAGACACGCCCAATTTGGCTCGGCTTCAGCGCACACAGGAGGCTCACCAAGGTGGGCTAGTATGCGGCATCCACCAGATTTTAGAGCAACTGGCACTTTCGGCCAGTAGG
CAAGAGTATGCCGAAAGACAAGCTCAGACCTACTGGACCTATTCTAAGAGGAGGGATGCCACCCTAAGGAGGGACCTGCAATCCAATTTTTCAAAACAATATCAGGCCTT
CCCAGTTTTCCCCGATGACTTGTTTAATCCTTGGATTCCGCCGCCGCCAGTAGAAAGAGAGGAAGAGGAGGAAGATGAGCAAGGCCACAAAAATTATCTGCTGATGATTG
AGTTAAAGGTGGTGATTATCTATTCAATGCTGAAAGAATTATTTTGCTGCAACAGTGCTTGGTTTTGCAAAATGCTCAGCGACTTGAGGGAGCAAAATCCGTTATCCAGC
AAAGCAGGCAGCAAAACTGCCACGTGTGCCGCACGTGATTCATTAAATGAGGTGGCGTTAGCTGAATTAATCTCGGATTTTGGAAGCTTGGAGAGCCCTCCAGGAAGTAT
GTGTTTGAAGCTAAAGCTGAAGCAAGGGGAGAAAAGTGGATTTGAAGGCTTTGTTCGTGGAGATCGTGACGGGGACGTTCGGTTTCGGCCTACTTAG
Protein sequenceShow/hide protein sequence
MALKTRIKRRKTPEVREAKRRRRQQRAEVVEVVRKVVKDIAEEAVEEEHPKDLEEKKDSEQGEQPVENPHEEQKKQVEDVQWQGNGQEQQTQEVVSEIPRRRRRKQKAGR
IKQRDKGKGVAEAPVETEETDIEEPSLPYVRFNNDLARAKYLEMLKKDLLFERGFRVDLPHFLRAGITNHGWDQFCAKPESMNSNIVREFYTKIDDQEGFQAMVRGVAVD
WSPGAINSLFNLQHIPHAEFNEMVVAPSNDQLNAAVREDRVLMVFALLRSLSIDVAGMNAHESEDAILLNKGIIDTPNLARLQRTQEAHQGGLVCGIHQILEQLALSASR
QEYAERQAQTYWTYSKRRDATLRRDLQSNFSKQYQAFPVFPDDLFNPWIPPPPVEREEEEEDEQGHKNYLLMIELKVVIIYSMLKELFCCNSAWFCKMLSDLREQNPLSS
KAGSKTATCAARDSLNEVALAELISDFGSLESPPGSMCLKLKLKQGEKSGFEGFVRGDRDGDVRFRPT