CuGenDBv2

Gene ID	Spg037237
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	transcription factor BEE 3
Genome location	scaffold7:36783278..36787847
RNA-Seq Expression	Spg037237
Synteny	Spg037237
Gene Ontology terms	GO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domains	IPR024097 - Basic helix-loop-helix leucine zipper transcription factor

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022973622.1 transcription factor BEE 1-like isoform X1 [Cucurbita maxima]

6.0e-45

68.26

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Query:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS
        +L +FKPSFSF D MDPN +LMGHYSA+N VVLDNP+ NFTN L FSN+MF P  Q PP+FP+SLG+  SF I   +      P+ P   EFHEMKKR+ 
Subjt:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS

Query:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
        MDVSESSSGIST   SETG F  KN   KGKRLKSIEKEEEK  REVV VRARRGQATDSHSLAERV
Subjt:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

XP_022973623.1 transcription factor BEE 1-like isoform X2 [Cucurbita maxima]

6.0e-45

68.26

Show/hide

Query:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS
        +L +FKPSFSF D MDPN +LMGHYSA+N VVLDNP+ NFTN L FSN+MF P  Q PP+FP+SLG+  SF I   +      P+ P   EFHEMKKR+ 
Subjt:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS

Query:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
        MDVSESSSGIST   SETG F  KN   KGKRLKSIEKEEEK  REVV VRARRGQATDSHSLAERV
Subjt:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

XP_023531058.1 transcription factor BEE 1-like isoform X2 [Cucurbita pepo subsp. pepo]

6.6e-44

67.66

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Query:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS
        +L +FKPSFSF D  DPN +LMGHYSA+N VVLDNP+ NFTN L FSN+MF P  Q PPQFP++LG+  SF I          P+ P   E HEMKKRK 
Subjt:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS

Query:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
        MDVSESSSGIST   SETG F  KN   KGKRLKSIEKEEEK  REVV VRARRGQATDSHSLAERV
Subjt:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

XP_023531060.1 transcription factor BEE 1-like isoform X3 [Cucurbita pepo subsp. pepo]

6.6e-44

67.66

Show/hide

Query:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS
        +L +FKPSFSF D  DPN +LMGHYSA+N VVLDNP+ NFTN L FSN+MF P  Q PPQFP++LG+  SF I          P+ P   E HEMKKRK 
Subjt:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS

Query:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
        MDVSESSSGIST   SETG F  KN   KGKRLKSIEKEEEK  REVV VRARRGQATDSHSLAERV
Subjt:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

XP_023531061.1 transcription factor BEE 1-like isoform X4 [Cucurbita pepo subsp. pepo]

6.6e-44

67.66

Show/hide

Query:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS
        +L +FKPSFSF D  DPN +LMGHYSA+N VVLDNP+ NFTN L FSN+MF P  Q PPQFP++LG+  SF I          P+ P   E HEMKKRK 
Subjt:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS

Query:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
        MDVSESSSGIST   SETG F  KN   KGKRLKSIEKEEEK  REVV VRARRGQATDSHSLAERV
Subjt:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

TrEMBL top hits

e value

%identity

Alignment

A0A5B7ARH5 Putative BR enhanced expression 1 (Fragment)

1.4e-34

56.57

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Query:  MADFTSDLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFPQQIPPQFPESLGETSFPINLPS---HSTLQA--PNVPASGE
        MA+FTSD+ TFKPSFSFLD  +PN +LM H+S  N  VL N  +NF  F+ FSN+ F  QQ  P+FP +L E +FP    S   ++ L A  P V A  +
Subjt:  MADFTSDLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFPQQIPPQFPESLGETSFPINLPS---HSTLQA--PNVPASGE

Query:  FHEMKKRKSMDVSESSSGISTPQVSETGFKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
        FHE KKRK+MDVS+SSSG  +P VSE G + K+S  +GKR+K  E EEEK  +EV+ VRARRGQATDSHSLAERV
Subjt:  FHEMKKRKSMDVSESSSGISTPQVSETGFKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

A0A6J1C0H1 transcription factor BEE 3

1.6e-40

62.21

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Query:  MADFTSDLHTFKP-SFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFPQQIPPQFPESLGETSFPINLPSHSTLQAPNVPASGEFHEM
        MADF+ +L +FKP SFSF D MDPN +LMGHYSA+N      P+ NF N L FSN+MFFP Q PP+    L   +FP  LP    + AP    +  FH++
Subjt:  MADFTSDLHTFKP-SFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFPQQIPPQFPESLGETSFPINLPSHSTLQAPNVPASGEFHEM

Query:  KKRK-SMDVSESSSGISTPQVSETGFKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
        KKRK SM+ SES+SGISTPQ SE GFK+KNS  +GKRLKS+EKEEEK  REVV VRARRGQATDSHSLAERV
Subjt:  KKRK-SMDVSESSSGISTPQVSETGFKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

A0A6J1EI66 transcription factor BEE 1-like

6.3e-40

62.65

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Query:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS
        +L +FKPSFSF D  DPN +LM HYSA+N  VLDNP+ NFTN L FSN+MF P    PP+FP++LG+  SF I   +      P+ PA  EFHEMKKR+ 
Subjt:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS

Query:  MDVSESSSGISTPQVSETGFKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
        MDVSESSSGIS          T N   KGKRLKSIEKEEEK  REVV VRARRGQATDSHSLAERV
Subjt:  MDVSESSSGISTPQVSETGFKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

A0A6J1I809 transcription factor BEE 1-like isoform X1

2.9e-45

68.26

Show/hide

Query:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS
        +L +FKPSFSF D MDPN +LMGHYSA+N VVLDNP+ NFTN L FSN+MF P  Q PP+FP+SLG+  SF I   +      P+ P   EFHEMKKR+ 
Subjt:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS

Query:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
        MDVSESSSGIST   SETG F  KN   KGKRLKSIEKEEEK  REVV VRARRGQATDSHSLAERV
Subjt:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

A0A6J1IDP3 transcription factor BEE 1-like isoform X2

2.9e-45

68.26

Show/hide

Query:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS
        +L +FKPSFSF D MDPN +LMGHYSA+N VVLDNP+ NFTN L FSN+MF P  Q PP+FP+SLG+  SF I   +      P+ P   EFHEMKKR+ 
Subjt:  DLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFP-QQIPPQFPESLGE-TSFPINLPSHSTLQAPNVPASGEFHEMKKRKS

Query:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
        MDVSESSSGIST   SETG F  KN   KGKRLKSIEKEEEK  REVV VRARRGQATDSHSLAERV
Subjt:  MDVSESSSGISTPQVSETG-FKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

SwissProt top hits

e value

%identity

Alignment

Q8GWK7 Transcription factor BEE 3

4.5e-11

38.92

Show/hide

Query:  MADFTSDLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTN----FLSFSNEMFFPQQIPPQFPESLGETSFPINLPSHSTLQAPNVPASGEF
        MA+ +SD  TF        + DP            L  L N   +F      F S  + +FF  Q P  FP    E +F   +   S +Q  N  +S +F
Subjt:  MADFTSDLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTN----FLSFSNEMFFPQQIPPQFPESLGETSFPINLPSHSTLQAPNVPASGEF

Query:  HEMKKRKSM---------DVSESSSGISTPQVSETG-FKTK-NSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
         + KKRKS+          VS+ +   S+ QVS  G   TK NS R+GKR K+ E+E+E   REVV VRARRGQATDSHS+AERV
Subjt:  HEMKKRKSM---------DVSESSSGISTPQVSETG-FKTK-NSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

Q8GZ13 Transcription factor BEE 1

1.6e-08

44.66

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Query:  INLPSHSTLQAPNVPASGEF--------HEMKKRKSMDVSESSSGISTPQVSETGFKTK-NSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLA
        ++ P +S   + N  ++  F         E KKRK++  + SSS  S    +     T+  SLR+GKRLK  ++EE++  REVV VRARRGQATDSHSLA
Subjt:  INLPSHSTLQAPNVPASGEF--------HEMKKRKSMDVSESSSGISTPQVSETGFKTK-NSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLA

Query:  ERV
        ERV
Subjt:  ERV

Arabidopsis top hits

e value

%identity

Alignment

AT1G18400.1 BR enhanced expression 1

1.1e-09

44.66

Show/hide

Query:  INLPSHSTLQAPNVPASGEF--------HEMKKRKSMDVSESSSGISTPQVSETGFKTK-NSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLA
        ++ P +S   + N  ++  F         E KKRK++  + SSS  S    +     T+  SLR+GKRLK  ++EE++  REVV VRARRGQATDSHSLA
Subjt:  INLPSHSTLQAPNVPASGEF--------HEMKKRKSMDVSESSSGISTPQVSETGFKTK-NSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLA

Query:  ERV
        ERV
Subjt:  ERV

AT1G73830.1 BR enhanced expression 3

3.2e-12

38.92

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Query:  MADFTSDLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTN----FLSFSNEMFFPQQIPPQFPESLGETSFPINLPSHSTLQAPNVPASGEF
        MA+ +SD  TF        + DP            L  L N   +F      F S  + +FF  Q P  FP    E +F   +   S +Q  N  +S +F
Subjt:  MADFTSDLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTN----FLSFSNEMFFPQQIPPQFPESLGETSFPINLPSHSTLQAPNVPASGEF

Query:  HEMKKRKSM---------DVSESSSGISTPQVSETG-FKTK-NSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
         + KKRKS+          VS+ +   S+ QVS  G   TK NS R+GKR K+ E+E+E   REVV VRARRGQATDSHS+AERV
Subjt:  HEMKKRKSM---------DVSESSSGISTPQVSETG-FKTK-NSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

AT1G73830.2 BR enhanced expression 3

3.2e-12

38.92

Show/hide

Query:  MADFTSDLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTN----FLSFSNEMFFPQQIPPQFPESLGETSFPINLPSHSTLQAPNVPASGEF
        MA+ +SD  TF        + DP            L  L N   +F      F S  + +FF  Q P  FP    E +F   +   S +Q  N  +S +F
Subjt:  MADFTSDLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTN----FLSFSNEMFFPQQIPPQFPESLGETSFPINLPSHSTLQAPNVPASGEF

Query:  HEMKKRKSM---------DVSESSSGISTPQVSETG-FKTK-NSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
         + KKRKS+          VS+ +   S+ QVS  G   TK NS R+GKR K+ E+E+E   REVV VRARRGQATDSHS+AERV
Subjt:  HEMKKRKSM---------DVSESSSGISTPQVSETG-FKTK-NSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

AT3G07340.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

3.2e-04

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Query:  APNVPASGEFHEM-KKRKSMDVSESSSGISTPQVSE-----TGFKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV
        A +VPA     E+ +KRK+     S S +S+ +  E        + K S   G + KSI+       ++ + VRARRGQATDSHSLAERV
Subjt:  APNVPASGEFHEM-KKRKSMDVSESSSGISTPQVSE-----TGFKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERV

AT5G48560.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

1.9e-04

36.97

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Query:  PSHSTLQAPNVPASGEFHEMKKRKSMDVSES-----SSGISTPQVSETGFK------TKNSLRK-GKRLKSIEKEEE----------------KITREVV
        P+   L +P V   GEF   +KRKS+   +S     S+   +P  S+T  K      +K+S  K GKR +  E +EE                +  ++ +
Subjt:  PSHSTLQAPNVPASGEFHEMKKRKSMDVSES-----SSGISTPQVSETGFK------TKNSLRK-GKRLKSIEKEEE----------------KITREVV

Query:  RVRARRGQATDSHSLAERV
         VRARRGQATDSHSLAERV
Subjt:  RVRARRGQATDSHSLAERV

Sequences

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CDS sequence

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ATGGCGGATTTCACTTCTGACTTGCACACTTTCAAGCCCTCTTTTTCCTTCCTCGATCTCATGGACCCGAATTCGGACCTGATGGGTCACTATTCTGCTGCAAACCTAGT
CGTTTTGGATAACCCAACTGCGAATTTCACTAACTTCTTGTCGTTTTCAAATGAGATGTTTTTCCCTCAGCAAATCCCACCTCAATTTCCAGAAAGCTTGGGAGAAACTA
GCTTCCCAATAAATTTGCCATCTCACTCTACTTTGCAAGCTCCTAACGTTCCAGCTTCTGGTGAATTCCATGAGATGAAGAAGAGGAAATCCATGGATGTTTCGGAAAGC
AGCTCTGGGATTTCAACTCCACAAGTTTCTGAAACTGGGTTCAAGACAAAAAATAGCTTGAGGAAAGGGAAGAGATTGAAAAGCATAGAGAAAGAAGAAGAGAAAATTAC
GAGAGAAGTGGTTCGTGTCAGAGCTAGAAGAGGGCAGGCCACTGATAGCCACAGTTTAGCTGAAAGGGTTGAGTATTTTCGACATTTGCTTAAGTCTGTCAGCTTCAAGG
AGGGCAAGCATGTTGATGAAATGGGACCTCAAGAGGAGACAACAGGAAGCTGGAATTATGGATCAAAGGCGGAATCAAAATCTGTCGAAGAAAATCAACTGGCTGGGCAA
GATGATCCCGAGAATTATGAAGTTCATGGGGAAGGTTCCAATCATGAGGAGATTCCTATGGCTGGATTTCAGCTAACAAATTTCTTCAGAGGACGGCTATTGTATTCCAA
GATTTGGGGGTTTTTCAAGAGTGCATCAGAAGGCAGGAAGCGGCCTTCTGGATTCTGCATTAACTGA

mRNA sequence

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Protein sequence

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MADFTSDLHTFKPSFSFLDLMDPNSDLMGHYSAANLVVLDNPTANFTNFLSFSNEMFFPQQIPPQFPESLGETSFPINLPSHSTLQAPNVPASGEFHEMKKRKSMDVSES
SSGISTPQVSETGFKTKNSLRKGKRLKSIEKEEEKITREVVRVRARRGQATDSHSLAERVEYFRHLLKSVSFKEGKHVDEMGPQEETTGSWNYGSKAESKSVEENQLAGQ
DDPENYEVHGEGSNHEEIPMAGFQLTNFFRGRLLYSKIWGFFKSASEGRKRPSGFCIN

Spg037237 (gene) of Sponge gourd (cylindrica) v1 genome