; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037244 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037244
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPMD domain-containing protein
Genome locationscaffold7:30407020..30408114
RNA-Seq ExpressionSpg037244
SyntenySpg037244
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047546.1 hypothetical protein E6C27_scaffold2963G00230 [Cucumis melo var. makuwa]1.1e-1133.98Show/hide
Query:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGR-----------------DKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEP-----GEFRSKDND
        P +VRGP M  FSG+GG+ YF ++EAR  IH   R                 D   +S + +   P+ PK  G + GGK+IR+ E       E   +  D
Subjt:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGR-----------------DKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEP-----GEFRSKDND

Query:  GSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHP--VIDEI
         S S+  D HWKR    K+  V  D       +A   P++P PLSPLND L  +    S  S   P   DS    V  SK P+++   QS  P  +++EI
Subjt:  GSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHP--VIDEI

Query:  LGQKKT
           K T
Subjt:  LGQKKT

KAA0048575.1 uncharacterized protein E6C27_scaffold61G002130 [Cucumis melo var. makuwa]1.5e-1332.08Show/hide
Query:  VRGPMMVEFSGKGGAKYFDDFEARVHIHK-------------EGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEPGEFRSKDNDGSQSNNDDHHWK
        +R P MVEFSG+GG KY+ + EA +HIHK             EG   LV +  P P + K P + G +N  K I +    +  SK  + SQSNNDD HWK
Subjt:  VRGPMMVEFSGKGGAKYFDDFEARVHIHK-------------EGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEPGEFRSKDNDGSQSNNDDHHWK

Query:  RSKKSKQPSVCEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHPVIDEILGQKKTTTHAAASE
        RSK+                              L D ++ +EG   P    SP+V  +      NSK P+   V+ +   V  E   + +     A S 
Subjt:  RSKKSKQPSVCEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHPVIDEILGQKKTTTHAAASE

Query:  ISDYCADDVISI
        IS +CA+++I I
Subjt:  ISDYCADDVISI

KAA0050333.1 hypothetical protein E6C27_scaffold88G00590 [Cucumis melo var. makuwa]4.8e-1535.21Show/hide
Query:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIH-------------------------KEGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFE---PGEF
        P +VRGP M  FSG+GG+ YF ++EAR  IH                         ++ R  LV+SAIP P +P+  K  G++ GGK+IR+ E   P   
Subjt:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIH-------------------------KEGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFE---PGEF

Query:  RSKDNDGSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVP-SASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHP
               S S+  D HWKR  K  + S    ++ DG   SA   P++P PLSPLND L  +    S  S   P   DS    V  SK P+++   QS  P
Subjt:  RSKDNDGSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVP-SASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHP

Query:  --VIDEILGQKKT
          +++EI   K T
Subjt:  --VIDEILGQKKT

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]2.4e-1131.55Show/hide
Query:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEPGEFRSKDNDGSQSNNDDHHWKRSKKSKQPSV
        P  +RGP MVEFSG+GGAKY+ + EAR HI KE                    K G DN  K + +    +  S   + S SNNDD HWKR K+  + S+
Subjt:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEPGEFRSKDNDGSQSNNDDHHWKRSKKSKQPSV

Query:  CEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHPVIDEILGQKKTTTHAAAS-EISDYCADDV
         +++           P +  P         ++EG   P    SP+  D  A+   NSK P+    +  C P++ +   Q+   T    + EIS +C D++
Subjt:  CEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHPVIDEILGQKKTTTHAAAS-EISDYCADDV

Query:  ISIYRK
        IS  R+
Subjt:  ISIYRK

TYK06278.1 hypothetical protein E5676_scaffold157G00620 [Cucumis melo var. makuwa]1.1e-1133.98Show/hide
Query:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGR-----------------DKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEP-----GEFRSKDND
        P +VRGP M  FSG+GG+ YF ++EAR  IH   R                 D   +S + +   P+ PK  G + GGK+IR+ E       E   +  D
Subjt:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGR-----------------DKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEP-----GEFRSKDND

Query:  GSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHP--VIDEI
         S S+  D HWKR    K+  V  D       +A   P++P PLSPLND L  +    S  S   P   DS    V  SK P+++   QS  P  +++EI
Subjt:  GSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHP--VIDEI

Query:  LGQKKT
           K T
Subjt:  LGQKKT

TrEMBL top hitse value%identityAlignment
A0A5A7TZZ9 PMD domain-containing protein5.3e-1233.98Show/hide
Query:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGR-----------------DKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEP-----GEFRSKDND
        P +VRGP M  FSG+GG+ YF ++EAR  IH   R                 D   +S + +   P+ PK  G + GGK+IR+ E       E   +  D
Subjt:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGR-----------------DKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEP-----GEFRSKDND

Query:  GSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHP--VIDEI
         S S+  D HWKR    K+  V  D       +A   P++P PLSPLND L  +    S  S   P   DS    V  SK P+++   QS  P  +++EI
Subjt:  GSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHP--VIDEI

Query:  LGQKKT
           K T
Subjt:  LGQKKT

A0A5A7U349 PMD domain-containing protein2.3e-1535.21Show/hide
Query:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIH-------------------------KEGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFE---PGEF
        P +VRGP M  FSG+GG+ YF ++EAR  IH                         ++ R  LV+SAIP P +P+  K  G++ GGK+IR+ E   P   
Subjt:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIH-------------------------KEGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFE---PGEF

Query:  RSKDNDGSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVP-SASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHP
               S S+  D HWKR  K  + S    ++ DG   SA   P++P PLSPLND L  +    S  S   P   DS    V  SK P+++   QS  P
Subjt:  RSKDNDGSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVP-SASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHP

Query:  --VIDEILGQKKT
          +++EI   K T
Subjt:  --VIDEILGQKKT

A0A5A7U4M3 Uncharacterized protein7.4e-1432.08Show/hide
Query:  VRGPMMVEFSGKGGAKYFDDFEARVHIHK-------------EGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEPGEFRSKDNDGSQSNNDDHHWK
        +R P MVEFSG+GG KY+ + EA +HIHK             EG   LV +  P P + K P + G +N  K I +    +  SK  + SQSNNDD HWK
Subjt:  VRGPMMVEFSGKGGAKYFDDFEARVHIHK-------------EGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEPGEFRSKDNDGSQSNNDDHHWK

Query:  RSKKSKQPSVCEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHPVIDEILGQKKTTTHAAASE
        RSK+                              L D ++ +EG   P    SP+V  +      NSK P+   V+ +   V  E   + +     A S 
Subjt:  RSKKSKQPSVCEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHPVIDEILGQKKTTTHAAASE

Query:  ISDYCADDVISI
        IS +CA+++I I
Subjt:  ISDYCADDVISI

A0A5D3C453 Uncharacterized protein1.2e-1131.55Show/hide
Query:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEPGEFRSKDNDGSQSNNDDHHWKRSKKSKQPSV
        P  +RGP MVEFSG+GGAKY+ + EAR HI KE                    K G DN  K + +    +  S   + S SNNDD HWKR K+  + S+
Subjt:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEPGEFRSKDNDGSQSNNDDHHWKRSKKSKQPSV

Query:  CEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHPVIDEILGQKKTTTHAAAS-EISDYCADDV
         +++           P +  P         ++EG   P    SP+  D  A+   NSK P+    +  C P++ +   Q+   T    + EIS +C D++
Subjt:  CEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHPVIDEILGQKKTTTHAAAS-EISDYCADDV

Query:  ISIYRK
        IS  R+
Subjt:  ISIYRK

A0A5D3C543 PMD domain-containing protein5.3e-1233.98Show/hide
Query:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGR-----------------DKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEP-----GEFRSKDND
        P +VRGP M  FSG+GG+ YF ++EAR  IH   R                 D   +S + +   P+ PK  G + GGK+IR+ E       E   +  D
Subjt:  PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGR-----------------DKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEP-----GEFRSKDND

Query:  GSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHP--VIDEI
         S S+  D HWKR    K+  V  D       +A   P++P PLSPLND L  +    S  S   P   DS    V  SK P+++   QS  P  +++EI
Subjt:  GSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVPSASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHP--VIDEI

Query:  LGQKKT
           K T
Subjt:  LGQKKT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCAGAAAAAGTTAGGGGCCCAATGATGGTTGAGTTTTCCGGAAAGGGTGGAGCTAAATACTTTGATGATTTTGAGGCTCGAGTACATATTCATAAAGAAGGCAGAGATAA
ATTGGTGGCTAGTGCTATTCCTCTTCCTCCCAAGCCGAAATTTCCAAAAAAGGTTGGTAATGACAACGGAGGAAAAAAGATTCGCATGTTTGAACCTGGTGAATTTCGTT
CTAAGGATAATGATGGTAGTCAGAGCAATAACGACGATCATCATTGGAAAAGGTCTAAAAAGTCCAAACAACCATCAGTATGTGAAGATGAATATTTTGATGGAGTTCCT
AGTGCATCACCATTTCCTGAACTCCCTGCACCATTGTCACCATTAAATGATCCCCTTATAGAAGTTGAGGGGCATCATAGTCCTCCTTCCTTTGTGAGTCCAGACGTTTT
TGACTCCATAGCTGCGCGTGTGAGCAATTCCAAAGCACCAATGGATAGAGTTGTGATTCAATCTTGTCATCCTGTAATTGATGAAATTCTTGGACAAAAGAAGACAACAA
CCCATGCAGCTGCGTCTGAGATCTCTGATTATTGTGCTGACGATGTGATCTCCATCTATAGGAAATAG
mRNA sequenceShow/hide mRNA sequence
CCAGAAAAAGTTAGGGGCCCAATGATGGTTGAGTTTTCCGGAAAGGGTGGAGCTAAATACTTTGATGATTTTGAGGCTCGAGTACATATTCATAAAGAAGGCAGAGATAA
ATTGGTGGCTAGTGCTATTCCTCTTCCTCCCAAGCCGAAATTTCCAAAAAAGGTTGGTAATGACAACGGAGGAAAAAAGATTCGCATGTTTGAACCTGGTGAATTTCGTT
CTAAGGATAATGATGGTAGTCAGAGCAATAACGACGATCATCATTGGAAAAGGTCTAAAAAGTCCAAACAACCATCAGTATGTGAAGATGAATATTTTGATGGAGTTCCT
AGTGCATCACCATTTCCTGAACTCCCTGCACCATTGTCACCATTAAATGATCCCCTTATAGAAGTTGAGGGGCATCATAGTCCTCCTTCCTTTGTGAGTCCAGACGTTTT
TGACTCCATAGCTGCGCGTGTGAGCAATTCCAAAGCACCAATGGATAGAGTTGTGATTCAATCTTGTCATCCTGTAATTGATGAAATTCTTGGACAAAAGAAGACAACAA
CCCATGCAGCTGCGTCTGAGATCTCTGATTATTGTGCTGACGATGTGATCTCCATCTATAGGAAATAG
Protein sequenceShow/hide protein sequence
PEKVRGPMMVEFSGKGGAKYFDDFEARVHIHKEGRDKLVASAIPLPPKPKFPKKVGNDNGGKKIRMFEPGEFRSKDNDGSQSNNDDHHWKRSKKSKQPSVCEDEYFDGVP
SASPFPELPAPLSPLNDPLIEVEGHHSPPSFVSPDVFDSIAARVSNSKAPMDRVVIQSCHPVIDEILGQKKTTTHAAASEISDYCADDVISIYRK