| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0040194.1 gag/pol protein [Cucumis melo var. makuwa] | 6.9e-22 | 45.21 | Show/hide |
Query: VFSSVLRLQ-----------KCPKEFPQKRKASVETLKEQRRDAGYIPLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHIVNVL
VFS L +Q + KE+P+ + ++T + + PL TLSVLRDNDA+VE+ELP+PDTLPTSAESS ++SSTW+E Y ESVH+ +
Subjt: VFSSVLRLQ-----------KCPKEFPQKRKASVETLKEQRRDAGYIPLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHIVNVL
Query: FNVQEGQRVS----------LEEDDVRWLHAIFRAKLAGGPGGALS
+ + + S + DDV WLHAIFRAK AGGPGG ++
Subjt: FNVQEGQRVS----------LEEDDVRWLHAIFRAKLAGGPGGALS
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| KAA0062409.1 reverse transcriptase [Cucumis melo var. makuwa] | 4.0e-22 | 56.86 | Show/hide |
Query: PLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHI-------------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGA
PL TLSVLRDNDA+VE+ELPVPDTLPTSAESS ++SSTW+E Y ESVH+ ++++F+V G + DDV WLHA+FRAK GGPGG
Subjt: PLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHI-------------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGA
Query: LS
++
Subjt: LS
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| TYK25935.1 gag/pol protein [Cucumis melo var. makuwa] | 6.9e-22 | 45.21 | Show/hide |
Query: VFSSVLRLQ-----------KCPKEFPQKRKASVETLKEQRRDAGYIPLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHIVNVL
VFS L +Q + KE+P+ + ++T + + PL TLSVLRDNDA+VE+ELP+PDTLPTSAESS ++SSTW+E Y ESVH+ +
Subjt: VFSSVLRLQ-----------KCPKEFPQKRKASVETLKEQRRDAGYIPLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHIVNVL
Query: FNVQEGQRVS----------LEEDDVRWLHAIFRAKLAGGPGGALS
+ + + S + DDV WLHAIFRAK AGGPGG ++
Subjt: FNVQEGQRVS----------LEEDDVRWLHAIFRAKLAGGPGGALS
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| TYK26572.1 putative Retrotransposon protein [Cucumis melo var. makuwa] | 4.0e-22 | 56.86 | Show/hide |
Query: PLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHI-------------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGA
PL TLSVLRDNDA+VE+ELPVPDTLPTSAESS ++SSTW+E Y ESVH+ ++++F+V G + DDV WLHA+FRAK GGPGG
Subjt: PLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHI-------------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGA
Query: LS
++
Subjt: LS
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| TYK27998.1 reverse transcriptase [Cucumis melo var. makuwa] | 7.6e-21 | 63.64 | Show/hide |
Query: PLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGAL
PL TLSVLRDNDA+VE+ELPVPDTLPTSAESS ++SSTW+E Y+E VH+ + EDDV WLHA+FRAK AGGPGG +
Subjt: PLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGAL
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|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7T9P7 Gag/pol protein | 3.3e-22 | 45.21 | Show/hide |
Query: VFSSVLRLQ-----------KCPKEFPQKRKASVETLKEQRRDAGYIPLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHIVNVL
VFS L +Q + KE+P+ + ++T + + PL TLSVLRDNDA+VE+ELP+PDTLPTSAESS ++SSTW+E Y ESVH+ +
Subjt: VFSSVLRLQ-----------KCPKEFPQKRKASVETLKEQRRDAGYIPLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHIVNVL
Query: FNVQEGQRVS----------LEEDDVRWLHAIFRAKLAGGPGGALS
+ + + S + DDV WLHAIFRAK AGGPGG ++
Subjt: FNVQEGQRVS----------LEEDDVRWLHAIFRAKLAGGPGGALS
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| A0A5A7V9N3 Reverse transcriptase | 1.9e-22 | 56.86 | Show/hide |
Query: PLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHI-------------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGA
PL TLSVLRDNDA+VE+ELPVPDTLPTSAESS ++SSTW+E Y ESVH+ ++++F+V G + DDV WLHA+FRAK GGPGG
Subjt: PLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHI-------------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGA
Query: LS
++
Subjt: LS
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| A0A5D3DR18 Gag/pol protein | 3.3e-22 | 45.21 | Show/hide |
Query: VFSSVLRLQ-----------KCPKEFPQKRKASVETLKEQRRDAGYIPLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHIVNVL
VFS L +Q + KE+P+ + ++T + + PL TLSVLRDNDA+VE+ELP+PDTLPTSAESS ++SSTW+E Y ESVH+ +
Subjt: VFSSVLRLQ-----------KCPKEFPQKRKASVETLKEQRRDAGYIPLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHIVNVL
Query: FNVQEGQRVS----------LEEDDVRWLHAIFRAKLAGGPGGALS
+ + + S + DDV WLHAIFRAK AGGPGG ++
Subjt: FNVQEGQRVS----------LEEDDVRWLHAIFRAKLAGGPGGALS
|
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| A0A5D3DSY7 Putative Retrotransposon protein | 1.9e-22 | 56.86 | Show/hide |
Query: PLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHI-------------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGA
PL TLSVLRDNDA+VE+ELPVPDTLPTSAESS ++SSTW+E Y ESVH+ ++++F+V G + DDV WLHA+FRAK GGPGG
Subjt: PLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHI-------------VNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGA
Query: LS
++
Subjt: LS
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| A0A5D3DX39 Reverse transcriptase | 3.7e-21 | 63.64 | Show/hide |
Query: PLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGAL
PL TLSVLRDNDA+VE+ELPVPDTLPTSAESS ++SSTW+E Y+E VH+ + EDDV WLHA+FRAK AGGPGG +
Subjt: PLLTLSVLRDNDAIVEMELPVPDTLPTSAESSRTSSSTWVEFYIESVHIVNVLFNVQEGQRVSLEEDDVRWLHAIFRAKLAGGPGGAL
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