CuGenDBv2

Gene ID	Spg037319
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	Arp2/3 complex 34 kDa subunit
Genome location	scaffold8:235549..239351
RNA-Seq Expression	Spg037319
Synteny	Spg037319
Gene Ontology terms	GO:0030833 - regulation of actin filament polymerization (biological process) GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process) GO:0005737 - cytoplasm (cellular component) GO:0005885 - Arp2/3 protein complex (cellular component) GO:0005200 - structural constituent of cytoskeleton (molecular function) GO:0051015 - actin filament binding (molecular function)
InterPro domains	IPR007188 - Actin-related protein 2/3 complex subunit 2 IPR034666 - Arp2/3 complex subunit 2/4

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004134509.1 actin-related protein 2/3 complex subunit 2A [Cucumis sativus]

8.0e-84

96.47

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Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA
        LKLNLSKLPLDEDNRH ILVKVASIREVVLGAPLR ILKQLGSRVVASDVN+LVA+VHRPKESFFLVPQA
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA

XP_008439412.1 PREDICTED: actin-related protein 2/3 complex subunit 2A [Cucumis melo]

8.8e-83

94.71

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Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        MILLQSHSRFLLQTLL+RVHNLEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA
        LKLNLSKLPLDEDNRH +LVK+ASIREVVLGAPLR ILKQLGSRVVASDVN+LVA+VHRPKESFFLVPQA
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA

XP_038877486.1 actin-related protein 2/3 complex subunit 2A isoform X1 [Benincasa hispida]

3.9e-83

95.29

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Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        MILLQSHSRFLLQTLLNRVHNLEK VEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSAD VFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA
        LKLNLSKLPLDEDNRHA+LVKVASIREVVLGAPLR ILKQLGSRVVASDVNR+VA+VHRPKESFFLVPQA
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA

XP_038877487.1 actin-related protein 2/3 complex subunit 2A isoform X2 [Benincasa hispida]

3.9e-83

95.29

Show/hide

Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        MILLQSHSRFLLQTLLNRVHNLEK VEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSAD VFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA
        LKLNLSKLPLDEDNRHA+LVKVASIREVVLGAPLR ILKQLGSRVVASDVNR+VA+VHRPKESFFLVPQA
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA

XP_038877488.1 actin-related protein 2/3 complex subunit 2A isoform X3 [Benincasa hispida]

1.1e-82

95.27

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Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        MILLQSHSRFLLQTLLNRVHNLEK VEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSAD VFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQ
        LKLNLSKLPLDEDNRHA+LVKVASIREVVLGAPLR ILKQLGSRVVASDVNR+VA+VHRPKESFFLVPQ
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQ

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KIL8 Arp2/3 complex 34 kDa subunit

3.9e-84

96.47

Show/hide

Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA
        LKLNLSKLPLDEDNRH ILVKVASIREVVLGAPLR ILKQLGSRVVASDVN+LVA+VHRPKESFFLVPQA
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA

A0A1S3AYP0 Arp2/3 complex 34 kDa subunit

4.3e-83

94.71

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Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        MILLQSHSRFLLQTLL+RVHNLEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA
        LKLNLSKLPLDEDNRH +LVK+ASIREVVLGAPLR ILKQLGSRVVASDVN+LVA+VHRPKESFFLVPQA
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA

A0A6J1DP25 Arp2/3 complex 34 kDa subunit

8.0e-82

94.71

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Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKN + FLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA
        LKLNLSKLP DEDN+H ILVKVASIREVVLGAPLRVILK LGS+VVASDVNRLVA+VHRPKESFFLVPQA
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA

A0A6J1HA86 Arp2/3 complex 34 kDa subunit

2.1e-82

94.71

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Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        MILLQSHSRFLLQTLLNRV NLEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA
        LKLNLSKLP DEDNRH  LVKVASIREVVLGAPLRVILKQLGSR++ SDVNRLVA+VHRPKESFFLVPQA
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA

A0A6J1JR90 Arp2/3 complex 34 kDa subunit

7.3e-83

95.29

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Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        MILLQSHSRFLLQTLLNRV NLEKAVEVDYNWVEFDDVRYHVQVSMKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA
        LKLNLSKLP DEDNRHA LVKVASIREVVLGAPLRVILKQLGSR++ SDVNRLVA+VHRPKESFFLVPQA
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA

SwissProt top hits

e value

%identity

Alignment

F4IVU1 Actin-related protein 2/3 complex subunit 2B

2.4e-14

28.82

Show/hide

Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        M  L+  S  L +TLL +++  EK +EVD ++ EF  + YH++ S+ + ++  +S S  + +   V    + S   E IK     ++ I+DPPR GF LT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRL-VAMVHRPKESFFLVPQ
        L LNL  +P  ++    I+ +++ ++ ++L + L+ +L+ L  +  +  +N + + +V+ P E F++  Q
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRL-VAMVHRPKESFFLVPQ

Q8LGI3 Actin-related protein 2/3 complex subunit 2A

1.7e-57

68.24

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Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        MILLQSHSRFLLQTLL R  NL+KAVE+DY W+EFDDVRYHVQV+MKN +L LLSVSLP P  + +   GLP GAIEAIK  YG   QILDPPRDGF+LT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA
        LKLN SK+  DE+    +L K+ASIREVV+GAPL++I K L SR VA +++RLVA++HRP E+FFLVPQA
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA

Arabidopsis top hits

e value

%identity

Alignment

AT1G30825.1 Arp2/3 complex, 34 kD subunit p34-Arc

1.2e-58

68.24

Show/hide

Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        MILLQSHSRFLLQTLL R  NL+KAVE+DY W+EFDDVRYHVQV+MKN +L LLSVSLP P  + +   GLP GAIEAIK  YG   QILDPPRDGF+LT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA
        LKLN SK+  DE+    +L K+ASIREVV+GAPL++I K L SR VA +++RLVA++HRP E+FFLVPQA
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQA

AT2G33385.1 actin-related protein C2B

1.7e-15

28.82

Show/hide

Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        M  L+  S  L +TLL +++  EK +EVD ++ EF  + YH++ S+ + ++  +S S  + +   V    + S   E IK     ++ I+DPPR GF LT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRL-VAMVHRPKESFFLVPQ
        L LNL  +P  ++    I+ +++ ++ ++L + L+ +L+ L  +  +  +N + + +V+ P E F++  Q
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRL-VAMVHRPKESFFLVPQ

AT2G33385.2 actin-related protein C2B

1.7e-15

28.82

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Query:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT
        M  L+  S  L +TLL +++  EK +EVD ++ EF  + YH++ S+ + ++  +S S  + +   V    + S   E IK     ++ I+DPPR GF LT
Subjt:  MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLT

Query:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRL-VAMVHRPKESFFLVPQ
        L LNL  +P  ++    I+ +++ ++ ++L + L+ +L+ L  +  +  +N + + +V+ P E F++  Q
Subjt:  LKLNLSKLPLDEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRL-VAMVHRPKESFFLVPQ

Sequences

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CDS sequence

Show/hide CDS sequence

ATGATACTATTGCAGTCCCACTCCAGATTTCTGCTCCAGACGTTGTTGAATCGGGTGCATAATCTTGAAAAAGCAGTGGAAGTGGATTACAACTGGGTGGAATTTGATGA
TGTGCGTTACCATGTCCAGGTCTCAATGAAGAACACCCATCTCTTCCTGCTATCCGTATCATTGCCTATCCCTTCTGCAGATACTGTTTTTTGTGGCGGGCTTCCATCTG
GAGCTATAGAAGCTATTAAAGCTGCATATGGCGTGCTTGTACAGATTCTTGATCCTCCAAGAGATGGTTTTAATCTCACATTAAAATTGAATCTTTCGAAACTTCCTCTT
GATGAAGATAATAGGCACGCTATTTTGGTAAAAGTTGCATCTATTAGGGAAGTGGTTCTTGGTGCTCCATTAAGAGTAATTCTTAAACAACTCGGGTCAAGGGTTGTTGC
TTCCGACGTCAATAGGCTTGTTGCAATGGTACATCGTCCAAAAGAGTCATTTTTTCTTGTCCCTCAGGCCGGTAGCGGTGAGCAGCGATGGATGGCGACAGAAGGTGGTG
GTGGGCGGCAACGTGAGTGTGTAGCAGAGTTTTGCGGCTATGGTTAG

mRNA sequence

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Protein sequence

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MILLQSHSRFLLQTLLNRVHNLEKAVEVDYNWVEFDDVRYHVQVSMKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPL
DEDNRHAILVKVASIREVVLGAPLRVILKQLGSRVVASDVNRLVAMVHRPKESFFLVPQAGSGEQRWMATEGGGGRQRECVAEFCGYG

Spg037319 (gene) of Sponge gourd (cylindrica) v1 genome