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Spg037321 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037321
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionArp2/3 complex 34 kDa subunit
Genome locationscaffold8:228404..230348
RNA-Seq ExpressionSpg037321
SyntenySpg037321
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005200 - structural constituent of cytoskeleton (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR007188 - Actin-related protein 2/3 complex subunit 2
IPR034666 - Arp2/3 complex subunit 2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155337.1 actin-related protein 2/3 complex subunit 2A isoform X1 [Momordica charantia]2.5e-4791.43Show/hide
Query:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        Q EKV VVFP+RF+DSI+IALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQEL GAPNDALSANAGFVTFVIFPRHVEG KVDRVIWSLSTFHAYVSYH
Subjt:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

XP_022155338.1 actin-related protein 2/3 complex subunit 2A isoform X2 [Momordica charantia]2.5e-4791.43Show/hide
Query:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        Q EKV VVFP+RF+DSI+IALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQEL GAPNDALSANAGFVTFVIFPRHVEG KVDRVIWSLSTFHAYVSYH
Subjt:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

XP_022158274.1 uncharacterized protein LOC111024802 isoform X1 [Momordica charantia]2.5e-4794.17Show/hide
Query:  EKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVK
        EKVTVVFP+RFKDSI+IALATSFLQEFVEARRTAGLNNAPPCSWSPS PQEL GAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVK
Subjt:  EKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVK

Query:  ALE
          E
Subjt:  ALE

XP_022158275.1 uncharacterized protein LOC111024802 isoform X2 [Momordica charantia]6.6e-4878.63Show/hide
Query:  EKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVK
        EKVTVVFP+RFKDSI+IALATSFLQEFVEARRTAGLNNAPPCSWSPS PQEL GAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVK
Subjt:  EKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVK

Query:  ALEKDALVGGPILLHILCQKVEEGLDHILRT
          E          +H   ++  E L  IL+T
Subjt:  ALEKDALVGGPILLHILCQKVEEGLDHILRT

XP_038877487.1 actin-related protein 2/3 complex subunit 2A isoform X2 [Benincasa hispida]6.6e-4892.45Show/hide
Query:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        Q EKVTVVFP+RFKDSI+IALATSFLQEFVEARRTAGLNNAPPCSWS SPPQEL GAPNDALSANAGFVTFVIF RHVEGKKVDRVIWSLSTFHAYVSYH
Subjt:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALEK
        VKAL++
Subjt:  VKALEK

TrEMBL top hitse value%identityAlignment
A0A6J1DMP8 Arp2/3 complex 34 kDa subunit1.2e-4791.43Show/hide
Query:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        Q EKV VVFP+RF+DSI+IALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQEL GAPNDALSANAGFVTFVIFPRHVEG KVDRVIWSLSTFHAYVSYH
Subjt:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

A0A6J1DP25 Arp2/3 complex 34 kDa subunit1.2e-4791.43Show/hide
Query:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        Q EKV VVFP+RF+DSI+IALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQEL GAPNDALSANAGFVTFVIFPRHVEG KVDRVIWSLSTFHAYVSYH
Subjt:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

A0A6J1DVE2 Arp2/3 complex 34 kDa subunit3.2e-4878.63Show/hide
Query:  EKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVK
        EKVTVVFP+RFKDSI+IALATSFLQEFVEARRTAGLNNAPPCSWSPS PQEL GAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVK
Subjt:  EKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVK

Query:  ALEKDALVGGPILLHILCQKVEEGLDHILRT
          E          +H   ++  E L  IL+T
Subjt:  ALEKDALVGGPILLHILCQKVEEGLDHILRT

A0A6J1DYX6 Arp2/3 complex 34 kDa subunit1.2e-4794.17Show/hide
Query:  EKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVK
        EKVTVVFP+RFKDSI+IALATSFLQEFVEARRTAGLNNAPPCSWSPS PQEL GAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVK
Subjt:  EKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVK

Query:  ALE
          E
Subjt:  ALE

A0A6J1JR90 Arp2/3 complex 34 kDa subunit1.0e-4688.57Show/hide
Query:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        Q EKV VV+P+RFKDSI+IALATSFLQEFVEARR++GLN+APPCSWSPSPPQEL GAPNDALSANAGFVTFVIFPRHVEGKK+DRVIWSLSTFHAYVSYH
Subjt:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

SwissProt top hitse value%identityAlignment
F4IVU1 Actin-related protein 2/3 complex subunit 2B1.3e-2549.51Show/hide
Query:  KQGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY
        KQ EK+T VFP+ FKD+ ++ +ATSF QE VE      +  AP CSWSP PP +L G P   L+ N+GFV+F I  RH+EGK++D+ +W+L  F+A   Y
Subjt:  KQGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY

Query:  HVK
        H+K
Subjt:  HVK

O96623 Actin-related protein 2/3 complex subunit 29.4e-1341.51Show/hide
Query:  KKQGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWS-PSPPQELAGAPN-DALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAY
        K QG+ V V+F + FKD+ ++ L+  FLQ FV+ R+T  ++N P  ++S   PP EL G     A  AN GFV+FV+FP H+  KK       + TF  Y
Subjt:  KKQGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWS-PSPPQELAGAPN-DALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAY

Query:  VSYHVK
        + YH+K
Subjt:  VSYHVK

Q0IH88 Actin-related protein 2/3 complex subunit 2-A1.8e-1139.6Show/hide
Query:  EKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWS-PSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
        ++VTVVF   FKD  ++ +   F+QEF E RR +  + AP   +S   PP EL    + A+  N G++TFV+FPRH      D  I  + TF  Y+ YH+
Subjt:  EKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWS-PSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV

Query:  K
        K
Subjt:  K

Q8LGI3 Actin-related protein 2/3 complex subunit 2A5.6e-4276.19Show/hide
Query:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        Q +KVTV FP+RFKDS++  LATSFL+EFVEARR A LN AP CSWSP+ PQEL GAP + LSANAGFVTFVIFPRHVEGKK+DR +W+LSTFHAYVSYH
Subjt:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

Q8WTM6 Probable actin-related protein 2/3 complex subunit 29.4e-1337.86Show/hide
Query:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWS-PSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY
        + ++VTV+F   FKD+ ++ +   FLQEF E R+ +    AP   +S   PP EL   P   +  N G++TFV+FPRH   K  D  I  + +F  Y+ Y
Subjt:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWS-PSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY

Query:  HVK
        H+K
Subjt:  HVK

Arabidopsis top hitse value%identityAlignment
AT1G30825.1 Arp2/3 complex, 34 kD subunit p34-Arc4.0e-4376.19Show/hide
Query:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        Q +KVTV FP+RFKDS++  LATSFL+EFVEARR A LN AP CSWSP+ PQEL GAP + LSANAGFVTFVIFPRHVEGKK+DR +W+LSTFHAYVSYH
Subjt:  QGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

AT2G33385.1 actin-related protein C2B1.2e-2346.6Show/hide
Query:  KQGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY
        KQ EK+T VFP+ FKD+ ++ +ATSF Q+         +  AP CSWSP PP +L G P   L+ N+GFV+F I  RH+EGK++D+ +W+L  F+A   Y
Subjt:  KQGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY

Query:  HVK
        H+K
Subjt:  HVK

AT2G33385.2 actin-related protein C2B9.0e-2749.51Show/hide
Query:  KQGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY
        KQ EK+T VFP+ FKD+ ++ +ATSF QE VE      +  AP CSWSP PP +L G P   L+ N+GFV+F I  RH+EGK++D+ +W+L  F+A   Y
Subjt:  KQGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY

Query:  HVK
        H+K
Subjt:  HVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAAGTTGTTTGTTGTTCAAAAAAAAAAAAAAAAAACAGGGTGAGAAGGTAACTGTTGTGTTTCCGTTGAGATTTAAGGATTCTATAAACATTGCTCTTGCAACTTC
ATTTCTCCAGGAGTTTGTAGAAGCAAGACGAACTGCTGGACTTAATAATGCCCCTCCTTGTTCTTGGTCTCCATCTCCTCCTCAAGAATTGGCGGGCGCTCCTAATGACG
CATTATCAGCCAATGCAGGATTTGTGACTTTTGTAATTTTCCCTCGGCATGTAGAGGGAAAAAAGGTGGACCGTGTAATTTGGAGTTTGTCAACATTTCATGCATATGTT
AGTTATCACGTTAAGGCTCTCGAGAAGGATGCCCTCGTTGGTGGGCCCATTTTGTTGCACATTCTATGCCAGAAGGTGGAGGAAGGCCTGGATCACATTCTTCGAACGTG
TGACTATGCGTGCGTGGTGTGGGATTTGTTCTATGATGCTTTTGGAGTGCAGACACGGAGTTATTTGGATGTTAGGGAGATGATTGAGGAGTTCCTCCTCCATTCGCCTT
TTCGCGAGAAGCGGAGATTCTTGTGGCAAGCTGGCTTATGTGCTGTGTTATGGACTTCGTGGGGGAAAGAAATAACGGAGTGTTTAGGGGGTTCAAGAAAGACCCAAGGG
ATGCATGGTCTGTTAGGGACCAAGGCAGTATGGGATGCCTTTGTCCCACGTTGGAAAGATATGGACTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAAGTTGTTTGTTGTTCAAAAAAAAAAAAAAAAAACAGGGTGAGAAGGTAACTGTTGTGTTTCCGTTGAGATTTAAGGATTCTATAAACATTGCTCTTGCAACTTC
ATTTCTCCAGGAGTTTGTAGAAGCAAGACGAACTGCTGGACTTAATAATGCCCCTCCTTGTTCTTGGTCTCCATCTCCTCCTCAAGAATTGGCGGGCGCTCCTAATGACG
CATTATCAGCCAATGCAGGATTTGTGACTTTTGTAATTTTCCCTCGGCATGTAGAGGGAAAAAAGGTGGACCGTGTAATTTGGAGTTTGTCAACATTTCATGCATATGTT
AGTTATCACGTTAAGGCTCTCGAGAAGGATGCCCTCGTTGGTGGGCCCATTTTGTTGCACATTCTATGCCAGAAGGTGGAGGAAGGCCTGGATCACATTCTTCGAACGTG
TGACTATGCGTGCGTGGTGTGGGATTTGTTCTATGATGCTTTTGGAGTGCAGACACGGAGTTATTTGGATGTTAGGGAGATGATTGAGGAGTTCCTCCTCCATTCGCCTT
TTCGCGAGAAGCGGAGATTCTTGTGGCAAGCTGGCTTATGTGCTGTGTTATGGACTTCGTGGGGGAAAGAAATAACGGAGTGTTTAGGGGGTTCAAGAAAGACCCAAGGG
ATGCATGGTCTGTTAGGGACCAAGGCAGTATGGGATGCCTTTGTCCCACGTTGGAAAGATATGGACTCCTAA
Protein sequenceShow/hide protein sequence
MKSCLLFKKKKKKQGEKVTVVFPLRFKDSINIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYV
SYHVKALEKDALVGGPILLHILCQKVEEGLDHILRTCDYACVVWDLFYDAFGVQTRSYLDVREMIEEFLLHSPFREKRRFLWQAGLCAVLWTSWGKEITECLGGSRKTQG
MHGLLGTKAVWDAFVPRWKDMDS