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Spg037337 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037337
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionArp2/3 complex 34 kDa subunit
Genome locationscaffold8:664880..667475
RNA-Seq ExpressionSpg037337
SyntenySpg037337
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0005200 - structural constituent of cytoskeleton (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR034666 - Arp2/3 complex subunit 2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052409.1 actin-related protein 2/3 complex subunit 2A [Cucumis melo var. makuwa]1.6e-2797.01Show/hide
Query:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
        MKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDE
Subjt:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
XP_004134509.1 actin-related protein 2/3 complex subunit 2A [Cucumis sativus]1.6e-2797.01Show/hide
Query:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
        MKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDE
Subjt:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
XP_008439412.1 PREDICTED: actin-related protein 2/3 complex subunit 2A [Cucumis melo]1.6e-2797.01Show/hide
Query:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
        MKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDE
Subjt:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
XP_023544060.1 actin-related protein 2/3 complex subunit 2A [Cucurbita pepo subsp. pepo]6.0e-2772.45Show/hide
Query:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEGSSSFPF-------KVIINYKLLWILQKKGL
        MKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLP DE +            +V++   L  IL++ GL
Subjt:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEGSSSFPF-------KVIINYKLLWILQKKGL
XP_038877488.1 actin-related protein 2/3 complex subunit 2A isoform X3 [Benincasa hispida]6.0e-2795.52Show/hide
Query:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
        MKN HLFLLSVSLPIPSAD VFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDE
Subjt:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
TrEMBL top hitse value%identityAlignment
A0A0A0KIL8 Arp2/3 complex 34 kDa subunit7.7e-2897.01Show/hide
Query:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
        MKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDE
Subjt:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
A0A1S3AYP0 Arp2/3 complex 34 kDa subunit7.7e-2897.01Show/hide
Query:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
        MKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDE
Subjt:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
A0A5A7UG04 Arp2/3 complex 34 kDa subunit7.7e-2897.01Show/hide
Query:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
        MKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYG+LVQILDPPRDGFNLTLKLNLSKLPLDE
Subjt:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
A0A6J1HA86 Arp2/3 complex 34 kDa subunit3.8e-2797.01Show/hide
Query:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
        MKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLP DE
Subjt:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
A0A6J1JR90 Arp2/3 complex 34 kDa subunit3.8e-2797.01Show/hide
Query:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
        MKN HLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLP DE
Subjt:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
SwissProt top hitse value%identityAlignment
Q8LGI3 Actin-related protein 2/3 complex subunit 2A8.5e-1665.67Show/hide
Query:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
        MKN +L LLSVSLP P  + +   GLP GAIEAIK  YG   QILDPPRDGF+LTLKLN SK+  DE
Subjt:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
Arabidopsis top hitse value%identityAlignment
AT1G30825.1 Arp2/3 complex, 34 kD subunit p34-Arc6.0e-1765.67Show/hide
Query:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE
        MKN +L LLSVSLP P  + +   GLP GAIEAIK  YG   QILDPPRDGF+LTLKLN SK+  DE
Subjt:  MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAACACCCATCTCTTCCTGCTATCCGTATCATTGCCTATCCCTTCTGCAGATACTGTTTTTTGTGGCGGGCTTCCATCTGGAGCTATAGAAGCTATTAAAGCTGC
ATATGGCGTGCTTGTACAGATTCTTGATCCTCCAAGAGATGGTTTTAATCTCACATTAAAATTGAATCTTTCGAAACTTCCTCTTGATGAAGGTTCATCGAGTTTTCCTT
TTAAGGTCATTATAAATTATAAATTGTTATGGATATTGCAGAAAAAAGGGTTATTGTTTTATTTTTTCAATCTCTCTTCATGTTATCTGTATCTTTGTTTACGCTTCCTA
GCACTTGGTGCCCTACTGCCTTTGCATACAATATACTATTTTGGGAAGTTAATATCTAGGAATTTTCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAACACCCATCTCTTCCTGCTATCCGTATCATTGCCTATCCCTTCTGCAGATACTGTTTTTTGTGGCGGGCTTCCATCTGGAGCTATAGAAGCTATTAAAGCTGC
ATATGGCGTGCTTGTACAGATTCTTGATCCTCCAAGAGATGGTTTTAATCTCACATTAAAATTGAATCTTTCGAAACTTCCTCTTGATGAAGGTTCATCGAGTTTTCCTT
TTAAGGTCATTATAAATTATAAATTGTTATGGATATTGCAGAAAAAAGGGTTATTGTTTTATTTTTTCAATCTCTCTTCATGTTATCTGTATCTTTGTTTACGCTTCCTA
GCACTTGGTGCCCTACTGCCTTTGCATACAATATACTATTTTGGGAAGTTAATATCTAGGAATTTTCCTTGA
Protein sequenceShow/hide protein sequence
MKNTHLFLLSVSLPIPSADTVFCGGLPSGAIEAIKAAYGVLVQILDPPRDGFNLTLKLNLSKLPLDEGSSSFPFKVIINYKLLWILQKKGLLFYFFNLSSCYLYLCLRFL
ALGALLPLHTIYYFGKLISRNFP