; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037339 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037339
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPyridoxal 5'-phosphate synthase subunit PdxT
Genome locationscaffold8:831261..836525
RNA-Seq ExpressionSpg037339
SyntenySpg037339
Gene Ontology termsGO:0006541 - glutamine metabolic process (biological process)
GO:0008614 - pyridoxine metabolic process (biological process)
GO:0042823 - pyridoxal phosphate biosynthetic process (biological process)
GO:0005829 - cytosol (cellular component)
GO:1903600 - glutaminase complex (cellular component)
GO:0004359 - glutaminase activity (molecular function)
InterPro domainsIPR002161 - Pyridoxal 5'-phosphate synthase subunit PdxT/SNO
IPR029062 - Class I glutamine amidotransferase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0035336.1 putative pyridoxal 5'-phosphate synthase subunit PDX2 [Cucumis melo var. makuwa]3.0e-6189.71Show/hide
Query:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS
        S LQSFE+ELSIPELVS+EGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNS LHS+S+GEGK+EK +ESKVIVAVRQGNLLATAFHPELTSDNRWHS
Subjt:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS

Query:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF
        YFLKMAGDVE SSSS+E+IGV+N+RFERSKSDLPIF
Subjt:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF

XP_022958103.1 probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X1 [Cucurbita moschata]4.6e-6291.91Show/hide
Query:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS
        S LQSFE ELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNS+GEGKEEKG+E KVIVAVRQGNLLATAFHPELTSDNRWHS
Subjt:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS

Query:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF
        YFLKMAGDVE SSSSI +IGVDN RFERS  DLPIF
Subjt:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF

XP_022958104.1 probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X2 [Cucurbita moschata]4.6e-6291.91Show/hide
Query:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS
        S LQSFE ELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNS+GEGKEEKG+E KVIVAVRQGNLLATAFHPELTSDNRWHS
Subjt:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS

Query:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF
        YFLKMAGDVE SSSSI +IGVDN RFERS  DLPIF
Subjt:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF

XP_023534476.1 probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X1 [Cucurbita pepo subsp. pepo]1.0e-6191.18Show/hide
Query:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS
        S LQSFE ELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNS LHSNS+GEGKEEKG+E KVIVAVRQGNLLATAFHPELTSDNRWHS
Subjt:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS

Query:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF
        YFLKMAGDVE SSSSI +IGVDN+RFERS  DLPIF
Subjt:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF

XP_023534477.1 probable pyridoxal 5'-phosphate synthase subunit PDX2 isoform X2 [Cucurbita pepo subsp. pepo]1.0e-6191.18Show/hide
Query:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS
        S LQSFE ELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNS LHSNS+GEGKEEKG+E KVIVAVRQGNLLATAFHPELTSDNRWHS
Subjt:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS

Query:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF
        YFLKMAGDVE SSSSI +IGVDN+RFERS  DLPIF
Subjt:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF

TrEMBL top hitse value%identityAlignment
A0A0A0KAR5 Glutaminase3.2e-6190.44Show/hide
Query:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS
        S LQSFE+ELSIPELVS+EGGPETFRGVFIRAPAILDVGPEVQVLA CPVSSNS LHS+S+GEGK+EK SESKVIVAVRQGNLLATAFHPELTSDNRWHS
Subjt:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS

Query:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF
        YFLKMAGDVE SSSSIE+IGV+N+RFERSKSDLPIF
Subjt:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF

A0A1S3CLW1 Glutaminase1.4e-6189.71Show/hide
Query:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS
        S LQSFE+ELSIPELVS+EGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNS LHS+S+GEGK+EK +ESKVIVAVRQGNLLATAFHPELTSDNRWHS
Subjt:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS

Query:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF
        YFLKMAGDVE SSSS+E+IGV+N+RFERSKSDLPIF
Subjt:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF

A0A5D3CR96 Glutaminase1.4e-6189.71Show/hide
Query:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS
        S LQSFE+ELSIPELVS+EGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNS LHS+S+GEGK+EK +ESKVIVAVRQGNLLATAFHPELTSDNRWHS
Subjt:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS

Query:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF
        YFLKMAGDVE SSSS+E+IGV+N+RFERSKSDLPIF
Subjt:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF

A0A6J1H276 Glutaminase2.2e-6291.91Show/hide
Query:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS
        S LQSFE ELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNS+GEGKEEKG+E KVIVAVRQGNLLATAFHPELTSDNRWHS
Subjt:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS

Query:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF
        YFLKMAGDVE SSSSI +IGVDN RFERS  DLPIF
Subjt:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF

A0A6J1H447 Glutaminase2.2e-6291.91Show/hide
Query:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS
        S LQSFE ELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNS+GEGKEEKG+E KVIVAVRQGNLLATAFHPELTSDNRWHS
Subjt:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHS

Query:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF
        YFLKMAGDVE SSSSI +IGVDN RFERS  DLPIF
Subjt:  YFLKMAGDVEVSSSSIENIGVDNARFERSKSDLPIF

SwissProt top hitse value%identityAlignment
A0LUK9 Pyridoxal 5'-phosphate synthase subunit PdxT2.0e-1242.72Show/hide
Query:  LQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHSYF
        + SFEA++    L   +GGP   R VFIRAP + + GP+V+VL   P                   G  +  IVAVRQG +LATAFHPELT+D R H++F
Subjt:  LQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHSYF

Query:  LKM
        + M
Subjt:  LKM

A0RTP4 Pyridoxal 5'-phosphate synthase subunit PdxT1.0e-1145.1Show/hide
Query:  QSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFL
        +SFE ELS+     T  G E FRGVFIRAP I + GP VQV+A                E   +K       VAV+QG++L  +FHPELT+D   H YFL
Subjt:  QSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFL

Query:  KM
        KM
Subjt:  KM

A6WCI3 Pyridoxal 5'-phosphate synthase subunit PdxT1.0e-1142.57Show/hide
Query:  LQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHSYF
        + S+E +L +PE+  T GGP    G+FIRAP + + G EV+VLA                  +   G  +  IVAVRQG+LLAT+FHPE+T D+R H YF
Subjt:  LQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHSYF

Query:  L
        +
Subjt:  L

Q2RMI9 Pyridoxal 5'-phosphate synthase subunit PdxT4.1e-1347.62Show/hide
Query:  LQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHSYF
        + SFE +L IP L     G E F  VFIRAP I ++ P  + LA              T + K         IV VRQGNLLATAFHPELT D R HSYF
Subjt:  LQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHSYF

Query:  LKMAG
        LKM G
Subjt:  LKMAG

Q8LAD0 Probable pyridoxal 5'-phosphate synthase subunit PDX21.0e-4060.84Show/hide
Query:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKG-SESKVIVAVRQGNLLATAFHPELTSDNRWH
        S +QSFEA++ +P+L S EGGPET+RGVFIRAPA+LDVGP+V+VLA  PV SN  L+S+ST + +EE    E+KVIVAV+QGNLLATAFHPELT+D RWH
Subjt:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKG-SESKVIVAVRQGNLLATAFHPELTSDNRWH

Query:  SYFLKMAGDVE-----VSSSSIENIGVDNARFERSKSDLPIFQ
        SYF+KM  ++E      SS +I ++G  +A  E +K DLPIFQ
Subjt:  SYFLKMAGDVE-----VSSSSIENIGVDNARFERSKSDLPIFQ

Arabidopsis top hitse value%identityAlignment
AT5G60540.1 pyridoxine biosynthesis 27.4e-4260.84Show/hide
Query:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKG-SESKVIVAVRQGNLLATAFHPELTSDNRWH
        S +QSFEA++ +P+L S EGGPET+RGVFIRAPA+LDVGP+V+VLA  PV SN  L+S+ST + +EE    E+KVIVAV+QGNLLATAFHPELT+D RWH
Subjt:  STLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKG-SESKVIVAVRQGNLLATAFHPELTSDNRWH

Query:  SYFLKMAGDVE-----VSSSSIENIGVDNARFERSKSDLPIFQ
        SYF+KM  ++E      SS +I ++G  +A  E +K DLPIFQ
Subjt:  SYFLKMAGDVE-----VSSSSIENIGVDNARFERSKSDLPIFQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGCACCCTTCAAAGCTTTGAGGCAGAGCTCTCAATACCAGAGCTCGTGTCTACCGAAGGTGGTCCAGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAAT
TCTTGATGTGGGACCAGAAGTCCAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTACCTTGCATTCAAATTCCACTGGTGAAGGCAAAGAGGAAAAGGGTTCAGAAA
GTAAAGTGATTGTAGCGGTGAGGCAAGGGAACTTGCTCGCAACTGCTTTCCATCCTGAATTAACCTCAGATAATAGATGGCACAGTTACTTCCTGAAGATGGCTGGTGAT
GTTGAAGTATCCTCAAGCAGCATAGAAAACATAGGAGTTGACAATGCGAGATTCGAAAGATCGAAGAGTGATCTTCCGATTTTTCAATAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGCACCCTTCAAAGCTTTGAGGCAGAGCTCTCAATACCAGAGCTCGTGTCTACCGAAGGTGGTCCAGAAACATTTCGTGGAGTTTTCATCCGAGCTCCTGCAAT
TCTTGATGTGGGACCAGAAGTCCAAGTGCTGGCTCACTGCCCTGTCTCTTCAAACTCTACCTTGCATTCAAATTCCACTGGTGAAGGCAAAGAGGAAAAGGGTTCAGAAA
GTAAAGTGATTGTAGCGGTGAGGCAAGGGAACTTGCTCGCAACTGCTTTCCATCCTGAATTAACCTCAGATAATAGATGGCACAGTTACTTCCTGAAGATGGCTGGTGAT
GTTGAAGTATCCTCAAGCAGCATAGAAAACATAGGAGTTGACAATGCGAGATTCGAAAGATCGAAGAGTGATCTTCCGATTTTTCAATAG
Protein sequenceShow/hide protein sequence
MASTLQSFEAELSIPELVSTEGGPETFRGVFIRAPAILDVGPEVQVLAHCPVSSNSTLHSNSTGEGKEEKGSESKVIVAVRQGNLLATAFHPELTSDNRWHSYFLKMAGD
VEVSSSSIENIGVDNARFERSKSDLPIFQ