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Spg037343 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037343
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionArp2/3 complex 34 kDa subunit
Genome locationscaffold8:676177..680441
RNA-Seq ExpressionSpg037343
SyntenySpg037343
Gene Ontology termsGO:0030833 - regulation of actin filament polymerization (biological process)
GO:0034314 - Arp2/3 complex-mediated actin nucleation (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005885 - Arp2/3 protein complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0005200 - structural constituent of cytoskeleton (molecular function)
GO:0051015 - actin filament binding (molecular function)
InterPro domainsIPR007188 - Actin-related protein 2/3 complex subunit 2
IPR034666 - Arp2/3 complex subunit 2/4


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022155337.1 actin-related protein 2/3 complex subunit 2A isoform X1 [Momordica charantia]4.5e-4893.33Show/hide
Query:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKV  VFPMRF+DSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQEL GAPNDALSANAGFVTFVIFPRHVEG KVDRVIWSLSTFHAYVSYH
Subjt:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

XP_022155338.1 actin-related protein 2/3 complex subunit 2A isoform X2 [Momordica charantia]4.5e-4893.33Show/hide
Query:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKV  VFPMRF+DSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQEL GAPNDALSANAGFVTFVIFPRHVEG KVDRVIWSLSTFHAYVSYH
Subjt:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

XP_022158274.1 uncharacterized protein LOC111024802 isoform X1 [Momordica charantia]3.4e-4895.19Show/hide
Query:  AEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
        AEKVT VFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPS PQEL GAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
Subjt:  AEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV

Query:  KALE
        K  E
Subjt:  KALE

XP_022158275.1 uncharacterized protein LOC111024802 isoform X2 [Momordica charantia]4.1e-4980.3Show/hide
Query:  AEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
        AEKVT VFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPS PQEL GAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
Subjt:  AEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV

Query:  KALEKDALVGGPILLHILCRKVEEDLDHILRT
        K  E          +H   R+  E L  IL+T
Subjt:  KALEKDALVGGPILLHILCRKVEEDLDHILRT

XP_038877487.1 actin-related protein 2/3 complex subunit 2A isoform X2 [Benincasa hispida]9.0e-4994.34Show/hide
Query:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKVT VFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS SPPQEL GAPNDALSANAGFVTFVIF RHVEGKKVDRVIWSLSTFHAYVSYH
Subjt:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALEK
        VKAL++
Subjt:  VKALEK

TrEMBL top hitse value%identityAlignment
A0A6J1DMP8 Arp2/3 complex 34 kDa subunit2.2e-4893.33Show/hide
Query:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKV  VFPMRF+DSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQEL GAPNDALSANAGFVTFVIFPRHVEG KVDRVIWSLSTFHAYVSYH
Subjt:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

A0A6J1DP25 Arp2/3 complex 34 kDa subunit2.2e-4893.33Show/hide
Query:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKV  VFPMRF+DSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQEL GAPNDALSANAGFVTFVIFPRHVEG KVDRVIWSLSTFHAYVSYH
Subjt:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

A0A6J1DVE2 Arp2/3 complex 34 kDa subunit2.0e-4980.3Show/hide
Query:  AEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
        AEKVT VFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPS PQEL GAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
Subjt:  AEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV

Query:  KALEKDALVGGPILLHILCRKVEEDLDHILRT
        K  E          +H   R+  E L  IL+T
Subjt:  KALEKDALVGGPILLHILCRKVEEDLDHILRT

A0A6J1DYX6 Arp2/3 complex 34 kDa subunit1.7e-4895.19Show/hide
Query:  AEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
        AEKVT VFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPS PQEL GAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV
Subjt:  AEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHV

Query:  KALE
        K  E
Subjt:  KALE

A0A6J1JR90 Arp2/3 complex 34 kDa subunit1.8e-4790.48Show/hide
Query:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QAEKV  V+PMRFKDSIDIALATSFLQEFVEARR++GLN+APPCSWSPSPPQEL GAPNDALSANAGFVTFVIFPRHVEGKK+DRVIWSLSTFHAYVSYH
Subjt:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

SwissProt top hitse value%identityAlignment
F4IVU1 Actin-related protein 2/3 complex subunit 2B4.5e-2752.43Show/hide
Query:  KQAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY
        KQ EK+TAVFPM FKD+ D+ +ATSF QE VE      +  AP CSWSP PP +L G P   L+ N+GFV+F I  RH+EGK++D+ +W+L  F+A   Y
Subjt:  KQAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY

Query:  HVK
        H+K
Subjt:  HVK

O96623 Actin-related protein 2/3 complex subunit 25.4e-1240.57Show/hide
Query:  KKQAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS-PSPPQELAGAPN-DALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAY
        K Q + V  +F + FKD+ D+ L+  FLQ FV+ R+T  ++N P  ++S   PP EL G     A  AN GFV+FV+FP H+  KK       + TF  Y
Subjt:  KKQAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS-PSPPQELAGAPN-DALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAY

Query:  VSYHVK
        + YH+K
Subjt:  VSYHVK

Q3MHR7 Actin-related protein 2/3 complex subunit 21.2e-1138.1Show/hide
Query:  KKQAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS-PSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYV
        + + ++VT VF   FKD  D+ +   F+QEF E RR +  + AP   +S   PP EL    + A+  N G++TFV+FPRH      D  I  + TF  Y+
Subjt:  KKQAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS-PSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYV

Query:  SYHVK
         YH+K
Subjt:  SYHVK

Q8LGI3 Actin-related protein 2/3 complex subunit 2A1.0e-4278.1Show/hide
Query:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QA+KVT  FPMRFKDS+D  LATSFL+EFVEARR A LN AP CSWSP+ PQEL GAP + LSANAGFVTFVIFPRHVEGKK+DR +W+LSTFHAYVSYH
Subjt:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

Q8WTM6 Probable actin-related protein 2/3 complex subunit 22.9e-1338.83Show/hide
Query:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS-PSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY
        +A++VT +F   FKD+ D+ +   FLQEF E R+ +    AP   +S   PP EL   P   +  N G++TFV+FPRH   K  D  I  + +F  Y+ Y
Subjt:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWS-PSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY

Query:  HVK
        H+K
Subjt:  HVK

Arabidopsis top hitse value%identityAlignment
AT1G30825.1 Arp2/3 complex, 34 kD subunit p34-Arc7.1e-4478.1Show/hide
Query:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH
        QA+KVT  FPMRFKDS+D  LATSFL+EFVEARR A LN AP CSWSP+ PQEL GAP + LSANAGFVTFVIFPRHVEGKK+DR +W+LSTFHAYVSYH
Subjt:  QAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYH

Query:  VKALE
        VK  E
Subjt:  VKALE

AT2G33385.1 actin-related protein C2B4.4e-2549.51Show/hide
Query:  KQAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY
        KQ EK+TAVFPM FKD+ D+ +ATSF Q+         +  AP CSWSP PP +L G P   L+ N+GFV+F I  RH+EGK++D+ +W+L  F+A   Y
Subjt:  KQAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY

Query:  HVK
        H+K
Subjt:  HVK

AT2G33385.2 actin-related protein C2B3.2e-2852.43Show/hide
Query:  KQAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY
        KQ EK+TAVFPM FKD+ D+ +ATSF QE VE      +  AP CSWSP PP +L G P   L+ N+GFV+F I  RH+EGK++D+ +W+L  F+A   Y
Subjt:  KQAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAPNDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSY

Query:  HVK
        H+K
Subjt:  HVK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATCTGGGTCCTCTCCAATTGGGTTCCTCCAGGTGAAAGACACTGTGTTTGGATTATAATTTGCTTTGTTTTCACTTTTCAGTTCATAGGTGGAGTTCTTTTGGT
GGTTTCTCCCGGCGGTTGTTTGTTGTTCAAAAAAAAAAAAAAAAAACAGGCTGAGAAGGTAACTGCGGTGTTTCCGATGAGATTTAAGGATTCTATAGACATTGCTCTTG
CAACTTCATTTCTCCAGGAGTTTGTAGAAGCAAGACGAACTGCTGGACTTAATAATGCCCCTCCTTGTTCTTGGTCTCCATCTCCTCCTCAAGAATTGGCGGGCGCTCCT
AATGACGCATTATCAGCCAATGCAGGATTTGTGACTTTTGTAATTTTCCCTCGGCATGTAGAGGGAAAAAAGGTGGACCGTGTAATTTGGAGTTTGTCAACATTTCATGC
ATATGTTAGTTATCACGTTAAGGCTCTCGAGAAGGATGCCCTCGTTGGTGGGCCCATTTTGTTGCACATTCTATGCCGGAAGGTGGAGGAAGACCTGGATCACATTCTTC
GAACGTGTGACTATGCGTGCGTGGTGTGGGATTTGTTCTATGATGCTTTTGGAGTGCAGACACGGAGTTATTTGGATGTTAGGGAGATGATTGAGGAGTTCCTCCTCCAT
TCGCCTTTTCGCGAGAAGCGGAGATTCTTGTGGCAAGCTGGCTTGTGTGTTGTGTTATGGACTTTGTGGGGGAAAGAAATAACAGAGTGTTGGGGTTCAAGAAAGACCCA
AGGGATGCATGGTCTGTTAGGGATCAAGGCAGTATGGGATGCCTTTGTCCCACGTTGGAAAGATATGGACTCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATCTGGGTCCTCTCCAATTGGGTTCCTCCAGGTGAAAGACACTGTGTTTGGATTATAATTTGCTTTGTTTTCACTTTTCAGTTCATAGGTGGAGTTCTTTTGGT
GGTTTCTCCCGGCGGTTGTTTGTTGTTCAAAAAAAAAAAAAAAAAACAGGCTGAGAAGGTAACTGCGGTGTTTCCGATGAGATTTAAGGATTCTATAGACATTGCTCTTG
CAACTTCATTTCTCCAGGAGTTTGTAGAAGCAAGACGAACTGCTGGACTTAATAATGCCCCTCCTTGTTCTTGGTCTCCATCTCCTCCTCAAGAATTGGCGGGCGCTCCT
AATGACGCATTATCAGCCAATGCAGGATTTGTGACTTTTGTAATTTTCCCTCGGCATGTAGAGGGAAAAAAGGTGGACCGTGTAATTTGGAGTTTGTCAACATTTCATGC
ATATGTTAGTTATCACGTTAAGGCTCTCGAGAAGGATGCCCTCGTTGGTGGGCCCATTTTGTTGCACATTCTATGCCGGAAGGTGGAGGAAGACCTGGATCACATTCTTC
GAACGTGTGACTATGCGTGCGTGGTGTGGGATTTGTTCTATGATGCTTTTGGAGTGCAGACACGGAGTTATTTGGATGTTAGGGAGATGATTGAGGAGTTCCTCCTCCAT
TCGCCTTTTCGCGAGAAGCGGAGATTCTTGTGGCAAGCTGGCTTGTGTGTTGTGTTATGGACTTTGTGGGGGAAAGAAATAACAGAGTGTTGGGGTTCAAGAAAGACCCA
AGGGATGCATGGTCTGTTAGGGATCAAGGCAGTATGGGATGCCTTTGTCCCACGTTGGAAAGATATGGACTCCTAA
Protein sequenceShow/hide protein sequence
MEIWVLSNWVPPGERHCVWIIICFVFTFQFIGGVLLVVSPGGCLLFKKKKKKQAEKVTAVFPMRFKDSIDIALATSFLQEFVEARRTAGLNNAPPCSWSPSPPQELAGAP
NDALSANAGFVTFVIFPRHVEGKKVDRVIWSLSTFHAYVSYHVKALEKDALVGGPILLHILCRKVEEDLDHILRTCDYACVVWDLFYDAFGVQTRSYLDVREMIEEFLLH
SPFREKRRFLWQAGLCVVLWTLWGKEITECWGSRKTQGMHGLLGIKAVWDAFVPRWKDMDS