; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037349 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037349
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionProtein TAR1
Genome locationscaffold8:702918..704597
RNA-Seq ExpressionSpg037349
SyntenySpg037349
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF2282260.1 hypothetical protein GH714_043953 [Hevea brasiliensis]5.0e-5048.28Show/hide
Query:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSA--VSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIKHTCQTPWSVFQDGSNG
        GSRP FCS  RALLLIGAW LPRRPGIGRAL+ HPFSGLVDSA  +SL   +      A+     P+  S+  C+    S    HTCQTPWSVFQDG NG
Subjt:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSA--VSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIKHTCQTPWSVFQDGSNG

Query:  EPTGRCQERADAEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGP-------------------------TLT----------------
        EP GR QERA A AR       HDR D VS GV+ A A AA +I +GP P+ IGGP                         +LT                
Subjt:  EPTGRCQERADAEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGP-------------------------TLT----------------

Query:  ----------------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDSKAGLFPVRSPLLGESF
                                          G   TGLSPS APPSRGL PGP LRTLLQTTIRTPRAPDS+AGLFPVRSPLLGES+
Subjt:  ----------------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDSKAGLFPVRSPLLGESF

PHT27031.1 Protein TAR1 [Capsicum baccatum]1.4e-5249.83Show/hide
Query:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIKHTCQTPWSVFQDGSNGEP
        GSRPRFCSD RALLLIGAWHLPRRPG+GRAL+ HPFSGLVDSAVSLRASTRVSSGFA LRHSSPSFGSR                QTPWSVFQDGSNGEP
Subjt:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIKHTCQTPWSVFQDGSNGEP

Query:  TGRCQERADAEAR---------------------------------------PGERVASHDR----------DDDVSTGVTKAWALAAVSIPIGPCPKSI
        TG+    ADAEA                                        P  R ++ DR           D+    +T  ++ +  S P   C  S+
Subjt:  TGRCQERADAEAR---------------------------------------PGERVASHDR----------DDDVSTGVTKAWALAAVSIPIGPCPKSI

Query:  GGPTLT--------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDSKAGLFPVRSPLLGES
          P L                           G   TGLSPS APPSRGL PGP LRTLLQTTIRT   PDSKAGLFPVRSPLL ES
Subjt:  GGPTLT--------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDSKAGLFPVRSPLLGES

PHT27798.1 hypothetical protein CQW23_32590 [Capsicum baccatum]6.1e-4847.39Show/hide
Query:  MGSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIKHTCQTPWSVFQDGSNGE
        +GSR RFCSD  ALLLI AWHLP+RPG+GRAL+ HPFSGLVDSAVSL ASTRVSSGFA  RHSSPSFGSR                Q PWSVFQDGS GE
Subjt:  MGSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIKHTCQTPWSVFQDGSNGE

Query:  PTGRCQERADAEA---------------------------------RPGERVASHDRDDDVSTGVTKA---------------WALAAVSIPIGPCPKSI
        PTG+  E ADAEA                                 RPG       R      G T A               ++ +  S P G C  ++
Subjt:  PTGRCQERADAEA---------------------------------RPGERVASHDRDDDVSTGVTKA---------------WALAAVSIPIGPCPKSI

Query:  GGPTLT--------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDSKAGLFPVRSPLLGES
          P L                           GL  TGLSPS APPSRGL PG  LRTLLQTTIRT + PDSKAGLFP+RSPLL ES
Subjt:  GGPTLT--------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDSKAGLFPVRSPLLGES

TKR97783.1 hypothetical protein D5086_0000209830 [Populus alba]1.8e-5543.33Show/hide
Query:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------
        GSRP FCSD RALLLIGAW LPRRPGIGRALQ HPFSGLVDSAVSLR STRVSSGFA LRHSSPSFGSRQ CSHSNPSQKIK                  
Subjt:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------

Query:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGPTLT----------------
                 HTCQTPWSVFQ                            DRDD VSTGV+KA ALAA +I IGP P+ IGGP +T                
Subjt:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGPTLT----------------

Query:  -----------------------------------------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDSK
                                                                   G + TGLSPS AP SRGL PGP LRTLLQTTIRTP+APDS+
Subjt:  -----------------------------------------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDSK

Query:  AGLFP-VRSPLLGESFIVFGDDVQRVDIEVLARSRGGVARTEVATRYRGWINHRSVATTGAEDSNLSHPYDCAHGRPACARTCATNPKGG
        AG FP V  P LG        +  R  +       GG  R               V  T AEDS L  P   A GRP  A    +  + G
Subjt:  AGLFP-VRSPLLGESFIVFGDDVQRVDIEVLARSRGGVARTEVATRYRGWINHRSVATTGAEDSNLSHPYDCAHGRPACARTCATNPKGG

TKS01559.1 hypothetical protein D5086_0000171980 [Populus alba]7.2e-5750.32Show/hide
Query:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------
        GSRP FCSD RALLLIGAW LPRRPGIGRALQ HPFSGLVDSAVSLRASTRVSSGFA LRHSSPSFGSRQ CSHSNPSQKIK                  
Subjt:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------

Query:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEAR---------------------PG-------------------------ERVAS----HDR
                 HTCQTPWSVFQDG+NGEPTGRC ERA A AR                     PG                         +R AS    H  
Subjt:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEAR---------------------PG-------------------------ERVAS----HDR

Query:  DDDVSTGVTKAWALAAVSIPIGPCPKSIGGPTLT--------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDS
         D+    +T  ++ +  S P G C  S+  P L                           G + TGLSPS AP SRGL PGP LRTLLQTTIRTP+APDS
Subjt:  DDDVSTGVTKAWALAAVSIPIGPCPKSIGGPTLT--------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDS

Query:  KAGLFPVR
        +AG FP R
Subjt:  KAGLFPVR

TrEMBL top hitse value%identityAlignment
A0A2N9I9H1 Uncharacterized protein2.9e-6755.25Show/hide
Query:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------
        GSRPRFCSD RALLLIGAWHLPRRPGIGRALQ HPFSGLVDSAVSLRASTRVSSGFA LRHSSPSFGSRQ CSHSNPSQKIK                  
Subjt:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------

Query:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGP-------------------
                 HTCQTPWSVFQDG NGEP GR QE ADAEAR   R A HDRDDDVS G+T A A AAV+I +GP P+SIGGP                   
Subjt:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGP-------------------

Query:  ------TLT--------------------------------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPR
              +LT                                                  G   TGLSPS APPSRGL PGP LRTLLQTTIRTPR
Subjt:  ------TLT--------------------------------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPR

A0A2N9IDP5 Uncharacterized protein2.9e-6755.25Show/hide
Query:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------
        GSRPRFCSD RALLLIGAWHLPRRPGIGRALQ HPFSGLVDSAVSLRASTRVSSGFA LRHSSPSFGSRQ CSHSNPSQKIK                  
Subjt:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------

Query:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGP-------------------
                 HTCQTPWSVFQDG NGEP GR QE ADAEAR   R A HDRDDDVS G+T A A AAV+I +GP P+SIGGP                   
Subjt:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGP-------------------

Query:  ------TLT--------------------------------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPR
              +LT                                                  G   TGLSPS APPSRGL PGP LRTLLQTTIRTPR
Subjt:  ------TLT--------------------------------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPR

A0A2N9IJL7 Uncharacterized protein2.9e-6755.25Show/hide
Query:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------
        GSRPRFCSD RALLLIGAWHLPRRPGIGRALQ HPFSGLVDSAVSLRASTRVSSGFA LRHSSPSFGSRQ CSHSNPSQKIK                  
Subjt:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------

Query:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGP-------------------
                 HTCQTPWSVFQDG NGEP GR QE ADAEAR   R A HDRDDDVS G+T A A AAV+I +GP P+SIGGP                   
Subjt:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGP-------------------

Query:  ------TLT--------------------------------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPR
              +LT                                                  G   TGLSPS APPSRGL PGP LRTLLQTTIRTPR
Subjt:  ------TLT--------------------------------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPR

A0A4U5PMF1 Uncharacterized protein8.6e-5643.33Show/hide
Query:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------
        GSRP FCSD RALLLIGAW LPRRPGIGRALQ HPFSGLVDSAVSLR STRVSSGFA LRHSSPSFGSRQ CSHSNPSQKIK                  
Subjt:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------

Query:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGPTLT----------------
                 HTCQTPWSVFQ                            DRDD VSTGV+KA ALAA +I IGP P+ IGGP +T                
Subjt:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGPTLT----------------

Query:  -----------------------------------------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDSK
                                                                   G + TGLSPS AP SRGL PGP LRTLLQTTIRTP+APDS+
Subjt:  -----------------------------------------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDSK

Query:  AGLFP-VRSPLLGESFIVFGDDVQRVDIEVLARSRGGVARTEVATRYRGWINHRSVATTGAEDSNLSHPYDCAHGRPACARTCATNPKGG
        AG FP V  P LG        +  R  +       GG  R               V  T AEDS L  P   A GRP  A    +  + G
Subjt:  AGLFP-VRSPLLGESFIVFGDDVQRVDIEVLARSRGGVARTEVATRYRGWINHRSVATTGAEDSNLSHPYDCAHGRPACARTCATNPKGG

A0A4U5PWI8 Uncharacterized protein3.5e-5750.32Show/hide
Query:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------
        GSRP FCSD RALLLIGAW LPRRPGIGRALQ HPFSGLVDSAVSLRASTRVSSGFA LRHSSPSFGSRQ CSHSNPSQKIK                  
Subjt:  GSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIK------------------

Query:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEAR---------------------PG-------------------------ERVAS----HDR
                 HTCQTPWSVFQDG+NGEPTGRC ERA A AR                     PG                         +R AS    H  
Subjt:  ---------HTCQTPWSVFQDGSNGEPTGRCQERADAEAR---------------------PG-------------------------ERVAS----HDR

Query:  DDDVSTGVTKAWALAAVSIPIGPCPKSIGGPTLT--------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDS
         D+    +T  ++ +  S P G C  S+  P L                           G + TGLSPS AP SRGL PGP LRTLLQTTIRTP+APDS
Subjt:  DDDVSTGVTKAWALAAVSIPIGPCPKSIGGPTLT--------------------------GLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDS

Query:  KAGLFPVR
        +AG FP R
Subjt:  KAGLFPVR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTCGCGCCCAAGGTTTTGCAGCGACCACCGCGCCCTCCTACTCATTGGGGCCTGGCACTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCTCCATCCATT
TTCGGGGCTAGTTGATTCGGCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCTGCTCAGGCATAGTTCACCATCTTTCGGGTCTCGACAGACATGCT
CACACTCGAACCCTTCTCAGAAGATCAAGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGAT
GCCGAAGCACGCCCGGGGGAGCGTGTTGCCAGCCACGATCGGGATGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCTTTGGCCGCCGTCTCAATCCCCATCGGTCC
ATGCCCCAAGTCGATCGGCGGACCGACTCTCACCGGTCTGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCTGCTGAGGA
CGCTTCTCCAGACTACAATTCGGACGCCGAGGGCGCCCGATTCTAAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTCATCGTCTTTGGGGACGAC
GTTCAGAGGGTCGACATAGAAGTCCTCGCTCGCTCGCGGGGAGGAGTTGCACGGACTGAGGTCGCGACGCGGTACCGAGGTTGGATCAACCACCGTAGTGTCGCGACGAC
AGGCGCCGAGGACTCGAATTTAAGCCATCCGTACGACTGTGCGCACGGGAGGCCAGCGTGTGCCCGCACCTGCGCAACCAACCCGAAGGGGGGTTGCGTGGGGGGCAGCG
ATGCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTCGCGCCCAAGGTTTTGCAGCGACCACCGCGCCCTCCTACTCATTGGGGCCTGGCACTTGCCCCGACGGCCGGGTATAGGTCGCGCGCTTCAGCTCCATCCATT
TTCGGGGCTAGTTGATTCGGCAGTATCGCTGCGGGCCTCCACCAGAGTTTCCTCTGGCTTCGCCCTGCTCAGGCATAGTTCACCATCTTTCGGGTCTCGACAGACATGCT
CACACTCGAACCCTTCTCAGAAGATCAAGCACACATGTCAGACTCCTTGGTCCGTGTTTCAAGACGGGTCGAATGGGGAGCCCACAGGCCGATGCCAGGAGCGCGCAGAT
GCCGAAGCACGCCCGGGGGAGCGTGTTGCCAGCCACGATCGGGATGACGACGTCTCCACAGGCGTAACAAAGGCCTGGGCTTTGGCCGCCGTCTCAATCCCCATCGGTCC
ATGCCCCAAGTCGATCGGCGGACCGACTCTCACCGGTCTGAGCGCAACGGGGCTCTCACCCTCTCTGGCGCCCCCTTCCAGGGGACTTGTGCCCGGTCCGCTGCTGAGGA
CGCTTCTCCAGACTACAATTCGGACGCCGAGGGCGCCCGATTCTAAAGCTGGGCTCTTCCCGGTTCGCTCGCCGTTACTAGGGGAATCCTTCATCGTCTTTGGGGACGAC
GTTCAGAGGGTCGACATAGAAGTCCTCGCTCGCTCGCGGGGAGGAGTTGCACGGACTGAGGTCGCGACGCGGTACCGAGGTTGGATCAACCACCGTAGTGTCGCGACGAC
AGGCGCCGAGGACTCGAATTTAAGCCATCCGTACGACTGTGCGCACGGGAGGCCAGCGTGTGCCCGCACCTGCGCAACCAACCCGAAGGGGGGTTGCGTGGGGGGCAGCG
ATGCATGA
Protein sequenceShow/hide protein sequence
MGSRPRFCSDHRALLLIGAWHLPRRPGIGRALQLHPFSGLVDSAVSLRASTRVSSGFALLRHSSPSFGSRQTCSHSNPSQKIKHTCQTPWSVFQDGSNGEPTGRCQERAD
AEARPGERVASHDRDDDVSTGVTKAWALAAVSIPIGPCPKSIGGPTLTGLSATGLSPSLAPPSRGLVPGPLLRTLLQTTIRTPRAPDSKAGLFPVRSPLLGESFIVFGDD
VQRVDIEVLARSRGGVARTEVATRYRGWINHRSVATTGAEDSNLSHPYDCAHGRPACARTCATNPKGGCVGGSDA