CuGenDBv2

Gene ID	Spg037358
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	cyclin-C1-1-like
Genome location	scaffold8:1231700..1232777
RNA-Seq Expression	Spg037358
Synteny	Spg037358
Gene Ontology terms	GO:0110165 - cellular anatomical structure (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAG6604703.1 Cyclin-C1-2, partial [Cucurbita argyrosperma subsp. sororia]

1.1e-10

48.6

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Query:  TTIKLAAVRKGKSWQIRSQSMAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAI
        TTIKL AV   ++      SMAANFWTSSH                                   KQL+DQEEVDVVQSLDKDRGITLEDFKLIKM MA 
Subjt:  TTIKLAAVRKGKSWQIRSQSMAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAI

Query:  CNYSVRI
         NY +++
Subjt:  CNYSVRI

XP_004147331.1 cyclin-C1-1 isoform X1 [Cucumis sativus]

1.3e-08

51.72

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Query:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI
        MAANFWTSSH                                   KQLLDQEEVDVVQSLDKDRGITLEDFKLIKM MA  NY +++
Subjt:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI

XP_008460811.1 PREDICTED: cyclin-C1-1-like [Cucumis melo]

1.3e-08

51.72

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Query:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI
        MAANFWTSSH                                   KQLLDQEEVDVVQSLDKDRGITLEDFKLIKM MA  NY +++
Subjt:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI

XP_031736853.1 cyclin-C1-1 isoform X2 [Cucumis sativus]

1.3e-08

51.72

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Query:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI
        MAANFWTSSH                                   KQLLDQEEVDVVQSLDKDRGITLEDFKLIKM MA  NY +++
Subjt:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI

XP_038901502.1 cyclin-C1-1-like isoform X1 [Benincasa hispida]

1.3e-08

51.72

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Query:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI
        MAANFWTSSH                                   KQLLDQEEVDVVQSLDKDRGITLEDFKLIKM MA  NY +++
Subjt:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LKA5 Uncharacterized protein

6.3e-09

51.72

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Query:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI
        MAANFWTSSH                                   KQLLDQEEVDVVQSLDKDRGITLEDFKLIKM MA  NY +++
Subjt:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI

A0A1S3CDQ3 cyclin-C1-1-like

6.3e-09

51.72

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Query:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI
        MAANFWTSSH                                   KQLLDQEEVDVVQSLDKDRGITLEDFKLIKM MA  NY +++
Subjt:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI

A0A6J1DV87 cyclin-C1-1-like isoform X2

1.4e-08

50.57

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Query:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI
        MAANFWTSSH                                   KQLLDQEEVDVVQSLDKDRGITL+DFKLIKM MA  NY +++
Subjt:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI

A0A6J1G812 cyclin-C1-1-like isoform X1

1.1e-08

50.57

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Query:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI
        MAANFWTSSH                                   KQL+DQEEVDVVQSLDKDRGITLEDFKLIKM MA  NY +++
Subjt:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI

A0A6J1I4M9 cyclin-C1-1-like isoform X1

1.1e-08

50.57

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Query:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI
        MAANFWTSSH                                   KQL+DQEEVDVVQSLDKDRGITLEDFKLIKM MA  NY +++
Subjt:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMAICNYSVRI

SwissProt top hits

e value

%identity

Alignment

P93411 Cyclin-C1-1

4.8e-06

40.51

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Query:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMA
        MAANFWTSSH                                   KQLLDQE+VD V   D DRGITLE+F+L+K+ M+
Subjt:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMA

Q9FJK6 Cyclin-C1-1

2.2e-06

41.77

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Query:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMA
        MAANFW SSH                                   KQLLD EEVDVV  LDK+RGI+++DFKLIK  M+
Subjt:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMA

Q9FJK7 Cyclin-C1-2

7.7e-04

56.76

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Query:  TYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMA
        T+ K+L D EEV+VV  LD  RGI++EDF+LIK+ M+
Subjt:  TYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMA

Arabidopsis top hits

e value

%identity

Alignment

AT5G48630.1 Cyclin family protein

5.5e-05

56.76

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Query:  TYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMA
        T+ K+L D EEV+VV  LD  RGI++EDF+LIK+ M+
Subjt:  TYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMA

AT5G48630.2 Cyclin family protein

1.9e-05

53.66

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Query:  CANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMA
        C    +SK+L D EEV+VV  LD  RGI++EDF+LIK+ M+
Subjt:  CANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMA

AT5G48640.1 Cyclin family protein

1.5e-07

41.77

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Query:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMA
        MAANFW SSH                                   KQLLD EEVDVV  LDK+RGI+++DFKLIK  M+
Subjt:  MAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDRGITLEDFKLIKMQMA

Sequences

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CDS sequence

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ATGGCGACGGCGACAACGGCCATGGAAGGAGTAAAGAAAAAGGAGAGTGAAGAGGCGGAAAAGGGGGAAGGAGAAGCGACTACTATAAAACTCGCAGCGGTGCGAAAAGG
CAAATCTTGGCAAATTCGTTCCCAAAGTATGGCTGCTAATTTCTGGACTTCATCGCACTTGTATGGTCCTAGAATATCCTCGCGCTTCACCAATTCTTTTCTTTTGTACA
TTCTGTATCAGTTTTCTTGTTCTTTATTTCTTTGTGCGAATGTAACCTACAGCAAACAACTCCTGGACCAAGAGGAGGTCGATGTGGTGCAATCGCTCGATAAAGATAGG
GGCATCACTCTTGAAGACTTCAAGCTCATTAAGATGCAAATGGCCATTTGTAATTACTCTGTTCGTATCTTCTTCTTTTCTTTTTGA

mRNA sequence

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Protein sequence

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MATATTAMEGVKKKESEEAEKGEGEATTIKLAAVRKGKSWQIRSQSMAANFWTSSHLYGPRISSRFTNSFLLYILYQFSCSLFLCANVTYSKQLLDQEEVDVVQSLDKDR
GITLEDFKLIKMQMAICNYSVRIFFFSF

Spg037358 (gene) of Sponge gourd (cylindrica) v1 genome