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Spg037391 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037391
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCyclin family protein
Genome locationscaffold8:1245926..1252321
RNA-Seq ExpressionSpg037391
SyntenySpg037391
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0007049 - cell cycle (biological process)
GO:0050790 - regulation of catalytic activity (biological process)
GO:0051301 - cell division (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016538 - cyclin-dependent protein serine/threonine kinase regulator activity (molecular function)
InterPro domainsIPR006671 - Cyclin, N-terminal
IPR013763 - Cyclin-like
IPR036915 - Cyclin-like superfamily
IPR043198 - Cyclin/Cyclin-like subunit Ssn8


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157726.1 cyclin-C1-1-like isoform X1 [Momordica charantia]2.3e-3394.94Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKK+HSDEKY+YEIKHILEMEMKILEALDYYLV+FHPYRALSQ
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

XP_022157727.1 cyclin-C1-1-like isoform X2 [Momordica charantia]2.3e-3394.94Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKK+HSDEKY+YEIKHILEMEMKILEALDYYLV+FHPYRALSQ
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

XP_022157728.1 cyclin-C1-1-like isoform X3 [Momordica charantia]2.3e-3394.94Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKK+HSDEKY+YEIKHILEMEMKILEALDYYLV+FHPYRALSQ
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

XP_031736854.1 cyclin-C1-1 isoform X3 [Cucumis sativus]3.9e-3397.47Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKI SDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

XP_038901504.1 cyclin-C1-1-like isoform X2 [Benincasa hispida]3.9e-3397.47Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKI SDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

TrEMBL top hitse value%identityAlignment
A0A0A0LKA5 Uncharacterized protein1.9e-3397.47Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKI SDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

A0A6J1DU31 cyclin-C1-1-like isoform X31.1e-3394.94Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKK+HSDEKY+YEIKHILEMEMKILEALDYYLV+FHPYRALSQ
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

A0A6J1DV87 cyclin-C1-1-like isoform X21.1e-3394.94Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKK+HSDEKY+YEIKHILEMEMKILEALDYYLV+FHPYRALSQ
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

A0A6J1DZ20 cyclin-C1-1-like isoform X11.1e-3394.94Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKK+HSDEKY+YEIKHILEMEMKILEALDYYLV+FHPYRALSQ
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

A0A6J1I4M9 cyclin-C1-1-like isoform X13.9e-3191.14Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSMTEYDPRLVTP CL+LASKAEESTVQARLLVFY+KKI SD+K+KYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

SwissProt top hitse value%identityAlignment
P39947 Cyclin-C3.8e-0740Show/hide
Query:  SMTEYDPRLVTPTCLYLASKAEE-------STVQARLLVFYIK-KIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        S+   DP L+ PTC++LASK EE       S + A   V   +    S +++ Y + HILE E  +LE +D  L+V+HPYR L Q
Subjt:  SMTEYDPRLVTPTCLYLASKAEE-------STVQARLLVFYIK-KIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

P93411 Cyclin-C1-12.7e-2983.75Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKI-HSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSMTEYDPRLV PTCLYLASK EESTVQARLLVFYIKK+  SDEKY++EIK ILEMEMK+LEALDYYLVV+HPYR L Q
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKI-HSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

Q86KE7 Cyclin-C1.1e-0944.16Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRAL
        K S  + +PRLV  TCLYL+SK EE   QA+     +K+I  D  + Y +  ILE E  +LE LD+ L+++HPY++L
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRAL

Q9FJK6 Cyclin-C1-11.4e-2574.68Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSM E++PRLV  TCLYLASKAEES VQAR LVFYIK+++ DE  KYE+K IL MEMK+LEALDYYLVVFHPYR+LS+
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

Q9FJK7 Cyclin-C1-21.5e-2773.42Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KS+TEY+PRLV PTCLYLA KAEES V A+LLVFY+KK+++DEK++YEIK ILEMEMK+LEAL++YLVVFHPYR+L +
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

Arabidopsis top hitse value%identityAlignment
AT5G27620.1 cyclin H;14.0e-0434.67Show/hide
Query:  SMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRAL
        S+ ++ P+ +  TC+Y A K EE+ V A  +    K I+ D +       IL+ EM +L++L++ L+V+ PYRA+
Subjt:  SMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRAL

AT5G48630.1 Cyclin family protein1.0e-2873.42Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KS+TEY+PRLV PTCLYLA KAEES V A+LLVFY+KK+++DEK++YEIK ILEMEMK+LEAL++YLVVFHPYR+L +
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

AT5G48630.2 Cyclin family protein1.0e-2873.42Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KS+TEY+PRLV PTCLYLA KAEES V A+LLVFY+KK+++DEK++YEIK ILEMEMK+LEAL++YLVVFHPYR+L +
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ

AT5G48640.1 Cyclin family protein9.8e-2774.68Show/hide
Query:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ
        +KSM E++PRLV  TCLYLASKAEES VQAR LVFYIK+++ DE  KYE+K IL MEMK+LEALDYYLVVFHPYR+LS+
Subjt:  KKSMTEYDPRLVTPTCLYLASKAEESTVQARLLVFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCAGTTGGTGGTGAAGGCCGGCGGTGGTTGGCAGAGACGGATGGTCGAGATGCCAAACCCTCCTTTGCTGCCGGTTGTTGTTCTCGAGTTAATTGTTCAAGTTG
CAGTGCCATAATTTCAATCATCAAATCTCTCAAGGATCCTTCAGGCTTGATGAAGGGCCTACCTCACGCCCTTTACTGGATTGGACTCTGCTCTTTCCAGCCATTAGGCC
CCAAAATTGGATGTCTGATACCAATTTGGGTTGTTGCAACTGCTATTACATATATGAGACGTGTTTACACCAGACCACTGCAGTCGAAACACAAAAGTGGAAAACATCTA
GATTTGATCTTGAGCGTTCACCTGCCCATGCGAAACTTCACTTTCTTGGGGATTTTAACCTTCCATAAAGAAGAGAACACAAAGGCATCTTGGGAAGGAGATGAAGAGCA
AAGGGTATGGAGAAAAAAGGCTCAAGAGAAGCCCTCAAAAGGAGCTTTCGAAAATCTATATGAAGATAATGAGCAAGATGTCGATGTTTCTTATGGAGTAGTTTCACCGA
TAGGAGGATTCAAAAAGAGTATGACAGAATACGATCCACGATTAGTGACGCCAACCTGCCTATATTTGGCTTCAAAAGCAGAAGAAAGCACAGTGCAAGCTAGACTTCTA
GTCTTCTACATTAAAAAAATACATTCTGATGAAAAGTACAAGTATGAGATTAAACACATACTGGAAATGGAAATGAAGATTTTAGAAGCCCTTGACTATTATTTGGTGGT
ATTCCACCCTTATCGTGCGTTGTCTCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCAGTTGGTGGTGAAGGCCGGCGGTGGTTGGCAGAGACGGATGGTCGAGATGCCAAACCCTCCTTTGCTGCCGGTTGTTGTTCTCGAGTTAATTGTTCAAGTTG
CAGTGCCATAATTTCAATCATCAAATCTCTCAAGGATCCTTCAGGCTTGATGAAGGGCCTACCTCACGCCCTTTACTGGATTGGACTCTGCTCTTTCCAGCCATTAGGCC
CCAAAATTGGATGTCTGATACCAATTTGGGTTGTTGCAACTGCTATTACATATATGAGACGTGTTTACACCAGACCACTGCAGTCGAAACACAAAAGTGGAAAACATCTA
GATTTGATCTTGAGCGTTCACCTGCCCATGCGAAACTTCACTTTCTTGGGGATTTTAACCTTCCATAAAGAAGAGAACACAAAGGCATCTTGGGAAGGAGATGAAGAGCA
AAGGGTATGGAGAAAAAAGGCTCAAGAGAAGCCCTCAAAAGGAGCTTTCGAAAATCTATATGAAGATAATGAGCAAGATGTCGATGTTTCTTATGGAGTAGTTTCACCGA
TAGGAGGATTCAAAAAGAGTATGACAGAATACGATCCACGATTAGTGACGCCAACCTGCCTATATTTGGCTTCAAAAGCAGAAGAAAGCACAGTGCAAGCTAGACTTCTA
GTCTTCTACATTAAAAAAATACATTCTGATGAAAAGTACAAGTATGAGATTAAACACATACTGGAAATGGAAATGAAGATTTTAGAAGCCCTTGACTATTATTTGGTGGT
ATTCCACCCTTATCGTGCGTTGTCTCAGTAA
Protein sequenceShow/hide protein sequence
MASVGGEGRRWLAETDGRDAKPSFAAGCCSRVNCSSCSAIISIIKSLKDPSGLMKGLPHALYWIGLCSFQPLGPKIGCLIPIWVVATAITYMRRVYTRPLQSKHKSGKHL
DLILSVHLPMRNFTFLGILTFHKEENTKASWEGDEEQRVWRKKAQEKPSKGAFENLYEDNEQDVDVSYGVVSPIGGFKKSMTEYDPRLVTPTCLYLASKAEESTVQARLL
VFYIKKIHSDEKYKYEIKHILEMEMKILEALDYYLVVFHPYRALSQ