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Spg037442 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037442
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold11:32458948..32460772
RNA-Seq ExpressionSpg037442
SyntenySpg037442
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_038876674.1 chromatin assembly factor 1 subunit A-like, partial [Benincasa hispida]2.5e-0438.1Show/hide
Query:  IEEPTYEQLAKALSLVAHKGVKWKESMTGIKILFSGDLKPEAPVWLYMIKNRIMPTTQDTTIS
        I++PT +Q+  AL ++   G+KW  S+ G+  L S  L  E  +W+Y++K R++ TT D T+S
Subjt:  IEEPTYEQLAKALSLVAHKGVKWKESMTGIKILFSGDLKPEAPVWLYMIKNRIMPTTQDTTIS

XP_038898613.1 LOW QUALITY PROTEIN: uncharacterized protein LOC120086174 [Benincasa hispida]4.3e-0438.1Show/hide
Query:  IEEPTYEQLAKALSLVAHKGVKWKESMTGIKILFSGDLKPEAPVWLYMIKNRIMPTTQDTTIS
        I++PT E +  AL ++A  G +W  S  GI+ L S  L  +  +W+Y++K +++PTT D T+S
Subjt:  IEEPTYEQLAKALSLVAHKGVKWKESMTGIKILFSGDLKPEAPVWLYMIKNRIMPTTQDTTIS

XP_038904385.1 uncharacterized protein LOC120090747 [Benincasa hispida]4.6e-0642.86Show/hide
Query:  IEEPTYEQLAKALSLVAHKGVKWKESMTGIKILFSGDLKPEAPVWLYMIKNRIMPTTQDTTIS
        I++P  E++  AL  +   G +W  S+ GIK L S  L PEA +W+Y++K RI+PT+ D T+S
Subjt:  IEEPTYEQLAKALSLVAHKGVKWKESMTGIKILFSGDLKPEAPVWLYMIKNRIMPTTQDTTIS

TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATTGAAGAGCCAACATATGAGCAGCTGGCAAAGGCCCTTTCCTTAGTGGCCCACAAGGGAGTGAAGTGGAAAGAGTCTATGACGGGGATCAAGATTCTATTTTC
TGGAGATTTGAAGCCAGAGGCACCAGTCTGGCTGTACATGATCAAAAATAGGATCATGCCTACAACACAAGACACCACGATCTCGCTTGCAGGAGTTGAGCCCGATGCTC
AAGAGGAGAGGGAGGTCGCCAGGATTTCCATAGGCGCAACTCCAGCACAATCTTCTCAGCAGCAACCTAAAGACAATATAGTGGAGCTGAGGCTAGATGTGGAGTATTTG
AGGGCCCAGTGCAGATTCTACATGGCATATGCCCAGATTCGGGATCACGTGCTGCGTAATATCTGTGATAAGCTGGTGGAAGACATTGACGATTATCTCCCTCCATTCCA
TGACATCTGGATCCACCTAGAGCCCCCGCTGACCTCCACCGACCGGCCGCCATCGTTGATCTCTGACTATCGGTCGTCGCGGACCTCTACCGACCAGTCGCTACCGTCAA
CCTCCGACTATCGGCCATCGCCGACCACCGCCTCCATAGACTTTCGAAAATCGACAGCCATCGACCTCCGTCGATCGATCGCCACCATCAACCCTCGACTACCGGTCGCC
GCCGACCTTCGTCGACCTCCGAATACTGGTCGTGGCCGACCGCTACCGTCGACCTCCGACGACCAGCCGTTGTCGACCTTCGCTGGCCGGCCGCCGCCATCCACCTCCGA
CTACCGGTCATCGCCGACCTCCGTCGACCGCCCGCCACCGTCCAACTCTGACTACCGGTCATTGTCGACCTCCGTCGACCGACTAACATCGTCGACCTCCAACTACCGGT
CGCGGTCGACCGCTACCGTCACCCTTCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATTGAAGAGCCAACATATGAGCAGCTGGCAAAGGCCCTTTCCTTAGTGGCCCACAAGGGAGTGAAGTGGAAAGAGTCTATGACGGGGATCAAGATTCTATTTTC
TGGAGATTTGAAGCCAGAGGCACCAGTCTGGCTGTACATGATCAAAAATAGGATCATGCCTACAACACAAGACACCACGATCTCGCTTGCAGGAGTTGAGCCCGATGCTC
AAGAGGAGAGGGAGGTCGCCAGGATTTCCATAGGCGCAACTCCAGCACAATCTTCTCAGCAGCAACCTAAAGACAATATAGTGGAGCTGAGGCTAGATGTGGAGTATTTG
AGGGCCCAGTGCAGATTCTACATGGCATATGCCCAGATTCGGGATCACGTGCTGCGTAATATCTGTGATAAGCTGGTGGAAGACATTGACGATTATCTCCCTCCATTCCA
TGACATCTGGATCCACCTAGAGCCCCCGCTGACCTCCACCGACCGGCCGCCATCGTTGATCTCTGACTATCGGTCGTCGCGGACCTCTACCGACCAGTCGCTACCGTCAA
CCTCCGACTATCGGCCATCGCCGACCACCGCCTCCATAGACTTTCGAAAATCGACAGCCATCGACCTCCGTCGATCGATCGCCACCATCAACCCTCGACTACCGGTCGCC
GCCGACCTTCGTCGACCTCCGAATACTGGTCGTGGCCGACCGCTACCGTCGACCTCCGACGACCAGCCGTTGTCGACCTTCGCTGGCCGGCCGCCGCCATCCACCTCCGA
CTACCGGTCATCGCCGACCTCCGTCGACCGCCCGCCACCGTCCAACTCTGACTACCGGTCATTGTCGACCTCCGTCGACCGACTAACATCGTCGACCTCCAACTACCGGT
CGCGGTCGACCGCTACCGTCACCCTTCGCTGA
Protein sequenceShow/hide protein sequence
MAIEEPTYEQLAKALSLVAHKGVKWKESMTGIKILFSGDLKPEAPVWLYMIKNRIMPTTQDTTISLAGVEPDAQEEREVARISIGATPAQSSQQQPKDNIVELRLDVEYL
RAQCRFYMAYAQIRDHVLRNICDKLVEDIDDYLPPFHDIWIHLEPPLTSTDRPPSLISDYRSSRTSTDQSLPSTSDYRPSPTTASIDFRKSTAIDLRRSIATINPRLPVA
ADLRRPPNTGRGRPLPSTSDDQPLSTFAGRPPPSTSDYRSSPTSVDRPPPSNSDYRSLSTSVDRLTSSTSNYRSRSTATVTLR