; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037444 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037444
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationscaffold11:31268487..31269901
RNA-Seq ExpressionSpg037444
SyntenySpg037444
Gene Ontology termsGO:0000373 - Group II intron splicing (biological process)
GO:0009658 - chloroplast organization (biological process)
GO:0003723 - RNA binding (molecular function)
GO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044190 - Protein THYLAKOID ASSEMBLY 8-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582003.1 hypothetical protein SDJN03_22005, partial [Cucurbita argyrosperma subsp. sororia]3.7e-10785.28Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFPQLG RQN TNP +HCCTA PPP+I CGLRKG RKPLG+SRVPSTE+IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI
        RQNELELSLQVFKFMR+E+W EPD++LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAYLQV MVERAV+ YELMKASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI

Query:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFL
        LIKNLE+F EEFA VVKKECAE+LDSPEKFL
Subjt:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFL

XP_022955796.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita moschata]1.8e-10683.12Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFPQLG RQN TNP +HCCTA PPP+  CGLRKG RKPLG+SRVPSTE+IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI
        RQNELELSLQVFKFMR+E+W EPD+ LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAYLQV MVERAV+ YELMKASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI

Query:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERR
        LIKNLE+F EEFA VVKKECAE+LDSPEKFL  +  R
Subjt:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERR

XP_022980054.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita maxima]3.0e-10982.72Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ H PQLG RQN TNP +HCCTA PPPNI CGLRKG RKPLG+SRVPSTE+IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI
        RQNELELSLQVFKFMR+E+W EPD+ LYH MI M+GKNK+IEMAEE+FH+ K+DGLEPDTRAFNEMMGAYLQV MVERAV+ YELMKASGCTPDKLTFKI
Subjt:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI

Query:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERRLVKDRI
        LIKNLE+F EEFA VVKKECAE+LDSPEKFL +VE++L+K +I
Subjt:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERRLVKDRI

XP_023527118.1 pentatricopeptide repeat-containing protein At1g62350-like [Cucurbita pepo subsp. pepo]6.1e-11083.13Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFPQLG RQN TNP +HCCTA PPPNI CGLRKG RKPLG+SRVPSTE+IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI
        RQNELELSLQVFKFMR+E+W EPD+ LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAY+QV MVERAV+ YELMKASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI

Query:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERRLVKDRI
        LIKNLE+F EEFA VVKKECAE+LDSPEKFL +VE++L+K +I
Subjt:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERRLVKDRI

XP_038878176.1 pentatricopeptide repeat-containing protein At1g62350-like [Benincasa hispida]3.6e-11086.08Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MG L+FHFPQLGLRQ+ TNP +HCCTAAPPPNI CGLRKGLRKPLGRSRVPS EAIQAVQSLKLAKS SKMEDVINSKLSRLLKADLFDALTELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI
        RQNELELSLQVFKF+++E+W EPD+ LYHGMILM GKNK+IEMAEEIFH+LKKDGLEPD RAFNEMMGAYLQV MVERAV+ YELMKASGCTPDKLTFKI
Subjt:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI

Query:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERR
        LIKNLEKF EEFA VVKKEC  YLDSPEKFL++VE++
Subjt:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERR

TrEMBL top hitse value%identityAlignment
A0A1S3BX97 pentatricopeptide repeat-containing protein At1g62350-like9.8e-10680.67Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFP+LGLRQN TN  +HCCTAAPPPNI CGLRKGL+KPLGRSRVPS EAIQAVQSLKLAK  SKMEDVIN+KLSRLLKADLFDALTELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI
        RQNELELSLQVFKFM++E+W EPD+ LYHGMI+M+GKNK+IEMAEE+FH+L+KDGLEPDTRAFNEMMGAYLQV M+ERA D Y LM ASGCTPDKLTFKI
Subjt:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI

Query:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERRL
        LIKNLEKF EEFA VVKK+C EYLD+P+KF ++  ++L
Subjt:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERRL

A0A5A7TQZ8 Pentatricopeptide repeat-containing protein4.4e-10681.09Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFPQLGLRQN TN  +HCCTAAPPPNI CGLRKGL+KPLGRSRVPS EAIQAVQSLKLAK  SKMEDVIN+KLSRLLKADLFDALTELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI
        RQNELELSLQVFKFM++E+W EPD+ LYHGMI+M+GKNK+IEMAEE+FH+L+KDGLEPDTRAFNEMMGAYLQV M+ERA D Y LM ASGCTPDKLTFKI
Subjt:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI

Query:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERRL
        LIKNLEKF EEFA VVKK+C EYLD+P+KF ++  ++L
Subjt:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERRL

A0A5D3CZ95 Pentatricopeptide repeat-containing protein9.8e-10680.67Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFP+LGLRQN TN  +HCCTAAPPPNI CGLRKGL+KPLGRSRVPS EAIQAVQSLKLAK  SKMEDVIN+KLSRLLKADLFDALTELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI
        RQNELELSLQVFKFM++E+W EPD+ LYHGMI+M+GKNK+IEMAEE+FH+L+KDGLEPDTRAFNEMMGAYLQV M+ERA D Y LM ASGCTPDKLTFKI
Subjt:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI

Query:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERRL
        LIKNLEKF EEFA VVKK+C EYLD+P+KF ++  ++L
Subjt:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERRL

A0A6J1GUU8 pentatricopeptide repeat-containing protein At1g62350-like8.9e-10783.12Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ HFPQLG RQN TNP +HCCTA PPP+  CGLRKG RKPLG+SRVPSTE+IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI
        RQNELELSLQVFKFMR+E+W EPD+ LYH MI M+GKNK+IEMAEE+FHELK+DGLEPDTRAFNEMMGAYLQV MVERAV+ YELMKASGC PDKLTFKI
Subjt:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI

Query:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERR
        LIKNLE+F EEFA VVKKECAE+LDSPEKFL  +  R
Subjt:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERR

A0A6J1IY98 pentatricopeptide repeat-containing protein At1g62350-like1.5e-10982.72Show/hide
Query:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ
        MKS +MGRL+ H PQLG RQN TNP +HCCTA PPPNI CGLRKG RKPLG+SRVPSTE+IQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDAL ELQ
Subjt:  MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQ

Query:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI
        RQNELELSLQVFKFMR+E+W EPD+ LYH MI M+GKNK+IEMAEE+FH+ K+DGLEPDTRAFNEMMGAYLQV MVERAV+ YELMKASGCTPDKLTFKI
Subjt:  RQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKI

Query:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERRLVKDRI
        LIKNLE+F EEFA VVKKECAE+LDSPEKFL +VE++L+K +I
Subjt:  LIKNLEKFGEEFAEVVKKECAEYLDSPEKFLDNVERRLVKDRI

SwissProt top hitse value%identityAlignment
O82178 Pentatricopeptide repeat-containing protein At2g351301.1e-1034.34Show/hide
Query:  EPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNLEKFG-EEFAEVVKKE
        +P+I  Y  ++    +  L E AEEIF +L++DGLEPD   +N +M +Y + G    A +++ LM+  GC PD+ ++ I++    + G    AE V +E
Subjt:  EPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNLEKFG-EEFAEVVKKE

Q1PFH7 Pentatricopeptide repeat-containing protein At1g623501.3e-1729.69Show/hide
Query:  STEAIQAVQSLKLAKSAS-KMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDG
        S E + A + LK  ++ S +++  I S +SRLLK+DL   L E QRQN++ L +++++ +R E W  PD+  Y  M++ML +NK ++  ++++ +LKK+ 
Subjt:  STEAIQAVQSLKLAKSAS-KMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDG

Query:  LEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNLEKFGEEFAEVVKKECAEYL------DSPEKFLDNVERRLVKD
        +  D   F +++  +L   +   A+ +Y  M+ S   P  L F++++K L  +  E  E VK +  E        D PE   ++ +     D
Subjt:  LEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNLEKFGEEFAEVVKKECAEYL------DSPEKFLDNVERRLVKD

Q9FKC3 Pentatricopeptide repeat-containing protein At5g48730, chloroplastic2.1e-1230.07Show/hide
Query:  SRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELK
        +++ S +AI  +   +  KS  + +      L R +   L + +T L+     E ++QVF+ +R++ W +P++ +Y  +I+MLGK K  E A E+F E+ 
Subjt:  SRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELK

Query:  KDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKAS-GCTPDKLTFKILIKN
         +G   +   +  ++ AY + G  + A  + E MK+S  C PD  T+ ILIK+
Subjt:  KDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKAS-GCTPDKLTFKILIKN

Q9LVW6 Protein THYLAKOID ASSEMBLY 8, chloroplastic3.6e-1231.84Show/hide
Query:  NITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLG
        +I CG R   R PL + R+ STEAIQ++QSLK A        +    L RL+K+DL   L EL RQ+   L++ V   +R E +   D+ LY  ++  L 
Subjt:  NITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLG

Query:  KNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASG-----CTPDKLTFKILIKNLEKFGE
        +NK  +  + +  E+       D +A  +++ A +     E  V +Y LM+ SG        D+   ++L K L + GE
Subjt:  KNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASG-----CTPDKLTFKILIKNLEKFGE

Q9STF9 Protein THYLAKOID ASSEMBLY 8-like, chloroplastic8.8e-1930.21Show/hide
Query:  RKPLGR-SRVPSTEAIQAVQSLK-LAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMA
        R PL R  ++   EA+  +  LK L +   K++  I + + RLLK D+   + EL+RQ E  L++++F+ ++ ++W +PD+ +Y  +I+ L K+K ++ A
Subjt:  RKPLGR-SRVPSTEAIQAVQSLK-LAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMA

Query:  EEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNL-------EKFGEEFAEVVKKECAEYLDSPEK
          ++ ++KK+ L PD++ + E++  +L+ G    A+++YE M  S   P++L F++L+K L        K  ++F E+  ++ A   D PE+
Subjt:  EEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNL-------EKFGEEFAEVVKKECAEYLDSPEK

Arabidopsis top hitse value%identityAlignment
AT1G62350.1 Pentatricopeptide repeat (PPR) superfamily protein9.0e-1929.69Show/hide
Query:  STEAIQAVQSLKLAKSAS-KMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDG
        S E + A + LK  ++ S +++  I S +SRLLK+DL   L E QRQN++ L +++++ +R E W  PD+  Y  M++ML +NK ++  ++++ +LKK+ 
Subjt:  STEAIQAVQSLKLAKSAS-KMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDG

Query:  LEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNLEKFGEEFAEVVKKECAEYL------DSPEKFLDNVERRLVKD
        +  D   F +++  +L   +   A+ +Y  M+ S   P  L F++++K L  +  E  E VK +  E        D PE   ++ +     D
Subjt:  LEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNLEKFGEEFAEVVKKECAEYL------DSPEKFLDNVERRLVKD

AT3G27750.1 FUNCTIONS IN: molecular_function unknown2.5e-1331.84Show/hide
Query:  NITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLG
        +I CG R   R PL + R+ STEAIQ++QSLK A        +    L RL+K+DL   L EL RQ+   L++ V   +R E +   D+ LY  ++  L 
Subjt:  NITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLG

Query:  KNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASG-----CTPDKLTFKILIKNLEKFGE
        +NK  +  + +  E+       D +A  +++ A +     E  V +Y LM+ SG        D+   ++L K L + GE
Subjt:  KNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASG-----CTPDKLTFKILIKNLEKFGE

AT3G46870.1 Pentatricopeptide repeat (PPR) superfamily protein6.2e-2030.21Show/hide
Query:  RKPLGR-SRVPSTEAIQAVQSLK-LAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMA
        R PL R  ++   EA+  +  LK L +   K++  I + + RLLK D+   + EL+RQ E  L++++F+ ++ ++W +PD+ +Y  +I+ L K+K ++ A
Subjt:  RKPLGR-SRVPSTEAIQAVQSLK-LAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMA

Query:  EEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNL-------EKFGEEFAEVVKKECAEYLDSPEK
          ++ ++KK+ L PD++ + E++  +L+ G    A+++YE M  S   P++L F++L+K L        K  ++F E+  ++ A   D PE+
Subjt:  EEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNL-------EKFGEEFAEVVKKECAEYLDSPEK

AT5G09320.1 Vacuolar sorting protein 9 (VPS9) domain1.1e-2434.3Show/hide
Query:  RKPLGRSRVPSTEAIQAVQSLKLA----------------KSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHG
        RKPL R R+ S EAIQAVQ+LK A                 S++ ++ VI SK  RLLK D+   L EL RQNE  L+L+VF+ +R E W +P + +Y  
Subjt:  RKPLGRSRVPSTEAIQAVQSLKLA----------------KSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHG

Query:  MILMLGKNKLIEMAEEIFHELKKD-GLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNLEKFGE-EFAEVVKKECAEYLDSPE
        MI ++  N L+E    ++  +K + GL  +   FN ++   L   + +  +D Y  M++ G  PD+ +F++L+  LE  GE   + +V+++  EY     
Subjt:  MILMLGKNKLIEMAEEIFHELKKD-GLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNLEKFGE-EFAEVVKKECAEYLDSPE

Query:  KFLDNVE
        +F++  E
Subjt:  KFLDNVE

AT5G48730.1 Pentatricopeptide repeat (PPR) superfamily protein1.5e-1330.07Show/hide
Query:  SRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELK
        +++ S +AI  +   +  KS  + +      L R +   L + +T L+     E ++QVF+ +R++ W +P++ +Y  +I+MLGK K  E A E+F E+ 
Subjt:  SRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQVFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELK

Query:  KDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKAS-GCTPDKLTFKILIKN
         +G   +   +  ++ AY + G  + A  + E MK+S  C PD  T+ ILIK+
Subjt:  KDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKAS-GCTPDKLTFKILIKN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAATCTATTGTAATGGGTCGTCTAGAATTCCATTTTCCTCAATTGGGTCTCCGCCAAAACCACACAAACCCAGGCGTCCATTGTTGTACGGCAGCTCCACCTCCAAA
TATCACCTGCGGCCTCAGGAAAGGCCTTAGGAAGCCCTTGGGGAGGTCAAGGGTGCCCTCCACTGAGGCCATTCAGGCAGTTCAGTCCCTCAAGCTCGCTAAATCCGCCT
CAAAAATGGAGGACGTAATCAATAGCAAACTCAGCAGATTGCTGAAAGCAGACTTGTTTGATGCTCTGACTGAATTACAGAGACAAAATGAACTGGAACTATCGCTCCAG
GTCTTTAAATTTATGCGTGATGAAGATTGGGTCGAGCCAGATATAACCTTGTACCATGGGATGATTCTGATGTTGGGAAAGAACAAACTGATTGAAATGGCTGAAGAGAT
CTTCCATGAGTTAAAAAAGGATGGCTTAGAACCAGACACAAGAGCTTTTAATGAGATGATGGGAGCATATTTGCAAGTGGGCATGGTCGAAAGAGCGGTTGATATGTATG
AATTAATGAAAGCATCAGGTTGTACTCCAGATAAACTGACTTTCAAGATTTTGATCAAGAATCTCGAGAAGTTTGGGGAAGAGTTTGCTGAAGTGGTGAAGAAAGAATGT
GCTGAGTACTTGGATTCTCCTGAGAAGTTCCTCGACAATGTCGAACGGAGACTCGTAAAAGATCGAATTTCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAATCTATTGTAATGGGTCGTCTAGAATTCCATTTTCCTCAATTGGGTCTCCGCCAAAACCACACAAACCCAGGCGTCCATTGTTGTACGGCAGCTCCACCTCCAAA
TATCACCTGCGGCCTCAGGAAAGGCCTTAGGAAGCCCTTGGGGAGGTCAAGGGTGCCCTCCACTGAGGCCATTCAGGCAGTTCAGTCCCTCAAGCTCGCTAAATCCGCCT
CAAAAATGGAGGACGTAATCAATAGCAAACTCAGCAGATTGCTGAAAGCAGACTTGTTTGATGCTCTGACTGAATTACAGAGACAAAATGAACTGGAACTATCGCTCCAG
GTCTTTAAATTTATGCGTGATGAAGATTGGGTCGAGCCAGATATAACCTTGTACCATGGGATGATTCTGATGTTGGGAAAGAACAAACTGATTGAAATGGCTGAAGAGAT
CTTCCATGAGTTAAAAAAGGATGGCTTAGAACCAGACACAAGAGCTTTTAATGAGATGATGGGAGCATATTTGCAAGTGGGCATGGTCGAAAGAGCGGTTGATATGTATG
AATTAATGAAAGCATCAGGTTGTACTCCAGATAAACTGACTTTCAAGATTTTGATCAAGAATCTCGAGAAGTTTGGGGAAGAGTTTGCTGAAGTGGTGAAGAAAGAATGT
GCTGAGTACTTGGATTCTCCTGAGAAGTTCCTCGACAATGTCGAACGGAGACTCGTAAAAGATCGAATTTCTTAA
Protein sequenceShow/hide protein sequence
MKSIVMGRLEFHFPQLGLRQNHTNPGVHCCTAAPPPNITCGLRKGLRKPLGRSRVPSTEAIQAVQSLKLAKSASKMEDVINSKLSRLLKADLFDALTELQRQNELELSLQ
VFKFMRDEDWVEPDITLYHGMILMLGKNKLIEMAEEIFHELKKDGLEPDTRAFNEMMGAYLQVGMVERAVDMYELMKASGCTPDKLTFKILIKNLEKFGEEFAEVVKKEC
AEYLDSPEKFLDNVERRLVKDRIS