; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037458 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037458
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionEukaryotic translation initiation factor 3 subunit I
Genome locationscaffold11:32653230..32655371
RNA-Seq ExpressionSpg037458
SyntenySpg037458
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
EOY13933.1 Uncharacterized protein TCM_032752 [Theobroma cacao]2.2e-0833.33Show/hide
Query:  ITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRGVAV----------------------DWMEPRQD--------GIEGAQWRLSKIEKRTFQA
        I +  W  F  +P  V   VVRE YA++ E     A VRG  V                       ++   QD         IEGAQW+ S  E  +F+ 
Subjt:  ITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRGVAV----------------------DWMEPRQD--------GIEGAQWRLSKIEKRTFQA

Query:  AYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVG
        + +K +   WL FV  RLLP+TH S V++++ +L++AI+   SIDVG
Subjt:  AYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVG

KAE8712804.1 hypothetical protein F3Y22_tig00110223pilonHSYRG00028 [Hibiscus syriacus]5.3e-1029.91Show/hide
Query:  ITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRGVAVDWMEPRQDGIEGAQWRLSKIEKRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRN
        +T H W+ F+  P +VN+ +V+E Y++I E      +V G+++ +     +     QW   ++ ++T     L  +   W  F+K +LLPT+H++TVS  
Subjt:  ITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRGVAVDWMEPRQDGIEGAQWRLSKIEKRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRN

Query:  KVLLVFAILRSLSIDVG
        +++L+ +I+  L+ID+G
Subjt:  KVLLVFAILRSLSIDVG

PIN07564.1 hypothetical protein CDL12_19862 [Handroanthus impetiginosus]4.9e-0826.94Show/hide
Query:  RLPMSASGF---GEDLPHFLRAGITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRG------------------VAVDWMEP-RQDGIE----
        ++P++  GF   GE     +   +    W+ F A+PES    + RE YA+  E + F+ +VRG                  + +D  E   ++GI+    
Subjt:  RLPMSASGF---GEDLPHFLRAGITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRG------------------VAVDWMEP-RQDGIE----

Query:  -------GAQWRLSKIEKRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVGVPTTLEDVILIDKGIIDTSNLAR
               GAQW+++K E  +F++  L   A  WL F+  ++LPT+H   V+ ++ LL++ I+   + DVG         +I   II ++N +R
Subjt:  -------GAQWRLSKIEKRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVGVPTTLEDVILIDKGIIDTSNLAR

PON46472.1 hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii]6.9e-1033.99Show/hide
Query:  FLRAGITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRGVAVDWME-----------------------PRQDGI--------EGAQWRLSKIE
        F+   IT H W+ F A PE     +VRE YA++ + E     VRGV V W E                        +QD I         GA+W +S   
Subjt:  FLRAGITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRGVAVDWME-----------------------PRQDGI--------EGAQWRLSKIE

Query:  KRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVG
          T   + L   A  W  F+K RLLPTTH  TVS++++LL+ ++L   SI+VG
Subjt:  KRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVG

TYG52543.1 hypothetical protein ES288_D09G036700v1 [Gossypium darwinii]2.9e-0833.79Show/hide
Query:  MSASGFG---EDL---PHFLRAGITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVR---GVAVDWMEPRQDGIE--GAQWRLSKIEKRTFQAAY
        MS  GFG    DL   P  +R  I    WE F       +  +VRE YAS+  ++  + IVR    +  D+++   D +   G+QW +      + Q  Y
Subjt:  MSASGFG---EDL---PHFLRAGITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVR---GVAVDWMEPRQDGIE--GAQWRLSKIEKRTFQAAY

Query:  LKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVG
        LK  A  W  FV+   +P +H ST+S   +LL++AIL   SI+VG
Subjt:  LKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVG

TrEMBL top hitse value%identityAlignment
A0A061FAJ6 Uncharacterized protein1.1e-0833.33Show/hide
Query:  ITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRGVAV----------------------DWMEPRQD--------GIEGAQWRLSKIEKRTFQA
        I +  W  F  +P  V   VVRE YA++ E     A VRG  V                       ++   QD         IEGAQW+ S  E  +F+ 
Subjt:  ITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRGVAV----------------------DWMEPRQD--------GIEGAQWRLSKIEKRTFQA

Query:  AYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVG
        + +K +   WL FV  RLLP+TH S V++++ +L++AI+   SIDVG
Subjt:  AYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVG

A0A2G9GQI5 Uncharacterized protein2.4e-0826.94Show/hide
Query:  RLPMSASGF---GEDLPHFLRAGITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRG------------------VAVDWMEP-RQDGIE----
        ++P++  GF   GE     +   +    W+ F A+PES    + RE YA+  E + F+ +VRG                  + +D  E   ++GI+    
Subjt:  RLPMSASGF---GEDLPHFLRAGITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRG------------------VAVDWMEP-RQDGIE----

Query:  -------GAQWRLSKIEKRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVGVPTTLEDVILIDKGIIDTSNLAR
               GAQW+++K E  +F++  L   A  WL F+  ++LPT+H   V+ ++ LL++ I+   + DVG         +I   II ++N +R
Subjt:  -------GAQWRLSKIEKRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVGVPTTLEDVILIDKGIIDTSNLAR

A0A2P5BCG4 Uncharacterized protein (Fragment)3.3e-1033.99Show/hide
Query:  FLRAGITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRGVAVDWME-----------------------PRQDGI--------EGAQWRLSKIE
        F+   IT H W+ F A PE     +VRE YA++ + E     VRGV V W E                        +QD I         GA+W +S   
Subjt:  FLRAGITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRGVAVDWME-----------------------PRQDGI--------EGAQWRLSKIE

Query:  KRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVG
          T   + L   A  W  F+K RLLPTTH  TVS++++LL+ ++L   SI+VG
Subjt:  KRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVG

A0A5D2B8V0 Uncharacterized protein1.4e-0833.79Show/hide
Query:  MSASGFG---EDL---PHFLRAGITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVR---GVAVDWMEPRQDGIE--GAQWRLSKIEKRTFQAAY
        MS  GFG    DL   P  +R  I    WE F       +  +VRE YAS+  ++  + IVR    +  D+++   D +   G+QW +      + Q  Y
Subjt:  MSASGFG---EDL---PHFLRAGITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVR---GVAVDWMEPRQDGIE--GAQWRLSKIEKRTFQAAY

Query:  LKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVG
        LK  A  W  FV+   +P +H ST+S   +LL++AIL   SI+VG
Subjt:  LKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVG

A0A6A3B6J9 RT_RNaseH_2 domain-containing protein2.5e-1029.91Show/hide
Query:  ITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRGVAVDWMEPRQDGIEGAQWRLSKIEKRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRN
        +T H W+ F+  P +VN+ +V+E Y++I E      +V G+++ +     +     QW   ++ ++T     L  +   W  F+K +LLPT+H++TVS  
Subjt:  ITNHGWELFSAKPESVNSNVVRELYASIDEEEGFQAIVRGVAVDWMEPRQDGIEGAQWRLSKIEKRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRN

Query:  KVLLVFAILRSLSIDVG
        +++L+ +I+  L+ID+G
Subjt:  KVLLVFAILRSLSIDVG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCATTTGACTCTTCCACGTGTCGTGCATGGAAGATCCAACGACCTAGCCGTTGGACAGCACATCAAGCATTTACCAGAGGTTATTCATAAGGAAATCGAGGATGT
TCCTGAAGAAGTGGCTAAGGAAGAGCAGCCAAAAGGATCTGAAGAAGGGAAGAATTCGAAACAAGGAGATCAACCTGTCGAAACTCAGAACGAAAATCAAGATAAGAGAG
CAGAGGATATGTCGGAACAAGGGAATGGTCAAGAAACCGAAGAACAACAGGTTCAAGGAGAAGTTGTGCCGGAGGTACCGCGTCATCGCCGCCGCAAGCTGAAGGTGAGA
CAAATCAAGGTGGTGAGGACAGACACTCCATCTCCATCAACGGCTGAATCCGAGAAGGAAAATACAAAAAAAGAGGATCAAGAGAAAGAGGAAACTGAAAAGAAAACTGA
AGATGAGGCCCTAATGAAGCAACAGGAAGATAAGGGCAAAGGAGTTGCTGAAGCAGCGACTGAGGCAGAAGAGGCTGAGACTGAGGAGCCAAGACTGCCGATGAGCGCTT
CAGGGTTTGGAGAAGATCTACCACATTTTCTTAGAGCTGGGATCACGAATCATGGATGGGAGCTATTCTCTGCGAAGCCAGAGTCAGTAAACTCGAATGTAGTTCGCGAG
TTGTACGCGAGCATTGATGAGGAGGAAGGCTTCCAAGCGATTGTTCGAGGAGTTGCTGTAGACTGGATGGAGCCTAGGCAAGATGGGATTGAAGGGGCTCAGTGGAGGCT
GTCGAAGATAGAAAAGCGAACTTTTCAGGCAGCATATTTGAAGAGCAAAGCAAACACCTGGTTGGGCTTTGTCAAACTACGTCTTCTACCGACAACCCATGATTCTACAG
TCTCTCGCAACAAAGTGCTCCTGGTTTTTGCAATCCTGAGGTCCCTGAGTATTGATGTTGGGGTGCCCACAACTCTAGAGGATGTTATTCTGATTGACAAGGGGATTATT
GACACGTCCAACCTCGCAAGGCTTCAGCAGACACAAGAAGCTCAACAAGGAAGGTTAGTGAAGAACGACTTGTGGGAGTCTATAGAGATAGGGAATGGGAAGGGAATGCT
TGAAGGATCAAGCTCTAGAGAGATCTTTGAAGCATCTTATAGAGCAATATTCAGCACCATGAAGCCTCAAGATGCAAGACACATGGTGGAGAGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCATTTGACTCTTCCACGTGTCGTGCATGGAAGATCCAACGACCTAGCCGTTGGACAGCACATCAAGCATTTACCAGAGGTTATTCATAAGGAAATCGAGGATGT
TCCTGAAGAAGTGGCTAAGGAAGAGCAGCCAAAAGGATCTGAAGAAGGGAAGAATTCGAAACAAGGAGATCAACCTGTCGAAACTCAGAACGAAAATCAAGATAAGAGAG
CAGAGGATATGTCGGAACAAGGGAATGGTCAAGAAACCGAAGAACAACAGGTTCAAGGAGAAGTTGTGCCGGAGGTACCGCGTCATCGCCGCCGCAAGCTGAAGGTGAGA
CAAATCAAGGTGGTGAGGACAGACACTCCATCTCCATCAACGGCTGAATCCGAGAAGGAAAATACAAAAAAAGAGGATCAAGAGAAAGAGGAAACTGAAAAGAAAACTGA
AGATGAGGCCCTAATGAAGCAACAGGAAGATAAGGGCAAAGGAGTTGCTGAAGCAGCGACTGAGGCAGAAGAGGCTGAGACTGAGGAGCCAAGACTGCCGATGAGCGCTT
CAGGGTTTGGAGAAGATCTACCACATTTTCTTAGAGCTGGGATCACGAATCATGGATGGGAGCTATTCTCTGCGAAGCCAGAGTCAGTAAACTCGAATGTAGTTCGCGAG
TTGTACGCGAGCATTGATGAGGAGGAAGGCTTCCAAGCGATTGTTCGAGGAGTTGCTGTAGACTGGATGGAGCCTAGGCAAGATGGGATTGAAGGGGCTCAGTGGAGGCT
GTCGAAGATAGAAAAGCGAACTTTTCAGGCAGCATATTTGAAGAGCAAAGCAAACACCTGGTTGGGCTTTGTCAAACTACGTCTTCTACCGACAACCCATGATTCTACAG
TCTCTCGCAACAAAGTGCTCCTGGTTTTTGCAATCCTGAGGTCCCTGAGTATTGATGTTGGGGTGCCCACAACTCTAGAGGATGTTATTCTGATTGACAAGGGGATTATT
GACACGTCCAACCTCGCAAGGCTTCAGCAGACACAAGAAGCTCAACAAGGAAGGTTAGTGAAGAACGACTTGTGGGAGTCTATAGAGATAGGGAATGGGAAGGGAATGCT
TGAAGGATCAAGCTCTAGAGAGATCTTTGAAGCATCTTATAGAGCAATATTCAGCACCATGAAGCCTCAAGATGCAAGACACATGGTGGAGAGTTAA
Protein sequenceShow/hide protein sequence
MEHLTLPRVVHGRSNDLAVGQHIKHLPEVIHKEIEDVPEEVAKEEQPKGSEEGKNSKQGDQPVETQNENQDKRAEDMSEQGNGQETEEQQVQGEVVPEVPRHRRRKLKVR
QIKVVRTDTPSPSTAESEKENTKKEDQEKEETEKKTEDEALMKQQEDKGKGVAEAATEAEEAETEEPRLPMSASGFGEDLPHFLRAGITNHGWELFSAKPESVNSNVVRE
LYASIDEEEGFQAIVRGVAVDWMEPRQDGIEGAQWRLSKIEKRTFQAAYLKSKANTWLGFVKLRLLPTTHDSTVSRNKVLLVFAILRSLSIDVGVPTTLEDVILIDKGII
DTSNLARLQQTQEAQQGRLVKNDLWESIEIGNGKGMLEGSSSREIFEASYRAIFSTMKPQDARHMVES