; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037466 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037466
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionmembrane-associated 30 kDa protein, chloroplastic
Genome locationscaffold11:31464658..31466136
RNA-Seq ExpressionSpg037466
SyntenySpg037466
Gene Ontology termsGO:0010027 - thylakoid membrane organization (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044539.1 membrane-associated 30 kDa protein [Cucumis melo var. makuwa]1.2e-0994.74Show/hide
Query:  SLVKGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
        SL KGELPPGRTVSGSAFPVRDAEIESELNELRQ+ARE
Subjt:  SLVKGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
XP_022955518.1 membrane-associated 30 kDa protein, chloroplastic [Cucurbita moschata]3.4e-09100Show/hide
Query:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
        KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
Subjt:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
XP_022979446.1 membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita maxima]3.4e-09100Show/hide
Query:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
        KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
Subjt:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
XP_023528686.1 membrane-associated 30 kDa protein, chloroplastic-like [Cucurbita pepo subsp. pepo]3.4e-09100Show/hide
Query:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
        KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
Subjt:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
XP_038882220.1 probable membrane-associated 30 kDa protein, chloroplastic [Benincasa hispida]3.4e-09100Show/hide
Query:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
        KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
Subjt:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
TrEMBL top hitse value%identityAlignment
A0A0A0KXA3 Uncharacterized protein3.6e-0997.14Show/hide
Query:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
        KGELPPGRTVSGSAFPVRDAEIESELNELRQ+ARE
Subjt:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
A0A1S3BX93 membrane-associated 30 kDa protein, chloroplastic3.6e-0997.14Show/hide
Query:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
        KGELPPGRTVSGSAFPVRDAEIESELNELRQ+ARE
Subjt:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
A0A5A7TTJ2 Membrane-associated 30 kDa protein5.6e-1094.74Show/hide
Query:  SLVKGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
        SL KGELPPGRTVSGSAFPVRDAEIESELNELRQ+ARE
Subjt:  SLVKGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
A0A6J1GWI0 membrane-associated 30 kDa protein, chloroplastic1.6e-09100Show/hide
Query:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
        KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
Subjt:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
A0A6J1INR4 membrane-associated 30 kDa protein, chloroplastic-like1.6e-09100Show/hide
Query:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
        KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
Subjt:  KGELPPGRTVSGSAFPVRDAEIESELNELRQKARE
SwissProt top hitse value%identityAlignment
O80796 Membrane-associated protein VIPP1, chloroplastic3.1e-0565.79Show/hide
Query:  KGELPPGR-TVSGSA-FPVRDAEIESELNELRQKAREF
        KGELPPGR TV+ S  +P +D+EIE+ELNELR+KA +F
Subjt:  KGELPPGR-TVSGSA-FPVRDAEIESELNELRQKAREF
Q8S0J7 Probable membrane-associated 30 kDa protein, chloroplastic1.6e-0669.23Show/hide
Query:  KGELPPGRTV---SGSAFPVRDAEIESELNELRQKAREF
        KGELPPGRT    SG+A P RD EIE+ELNELR+KA E+
Subjt:  KGELPPGRTV---SGSAFPVRDAEIESELNELRQKAREF
Arabidopsis top hitse value%identityAlignment
AT1G65260.1 plastid transcriptionally active 42.2e-0665.79Show/hide
Query:  KGELPPGR-TVSGSA-FPVRDAEIESELNELRQKAREF
        KGELPPGR TV+ S  +P +D+EIE+ELNELR+KA +F
Subjt:  KGELPPGR-TVSGSA-FPVRDAEIESELNELRQKAREF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGAGTCTTCTTCTCTCTTTTGTGGAATGTGAAAGTCCCGAAGAAGAATAGGTTCTTTATGTGGCAAGTTATCTATGGTAGAGCTAATACTTGCAATAGGCTTTTGAG
CAGGATGCCTTCCTTGGTTAAAGGAGAACTTCCACCCGGAAGAACCGTTTCTGGCAGTGCATTTCCAGTTCGTGATGCCGAGATCGAGTCGGAACTCAATGAACTGAGGC
AAAAAGCCAGAGAATTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCGAGTCTTCTTCTCTCTTTTGTGGAATGTGAAAGTCCCGAAGAAGAATAGGTTCTTTATGTGGCAAGTTATCTATGGTAGAGCTAATACTTGCAATAGGCTTTTGAG
CAGGATGCCTTCCTTGGTTAAAGGAGAACTTCCACCCGGAAGAACCGTTTCTGGCAGTGCATTTCCAGTTCGTGATGCCGAGATCGAGTCGGAACTCAATGAACTGAGGC
AAAAAGCCAGAGAATTTTAG
Protein sequenceShow/hide protein sequence
MRVFFSLLWNVKVPKKNRFFMWQVIYGRANTCNRLLSRMPSLVKGELPPGRTVSGSAFPVRDAEIESELNELRQKAREF