CuGenDBv2

Gene ID	Spg037468
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	UPF0496 protein
Genome location	scaffold11:31774533..31775380
RNA-Seq Expression	Spg037468
Synteny	Spg037468
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8725629.1 UPF0496 protein 1 [Hibiscus syriacus]

5.0e-09

45.65

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Query:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS
        +T+   G++G ++DS      + L G+         G  + +K     R+LV+RLEIEIE +LQ ADFAIE+EAVK+G++E+KKKLGVFMK+
Subjt:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

OMO63430.1 hypothetical protein COLO4_32460 [Corchorus olitorius]

2.9e-09

46.74

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Query:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS
        +T+   G++G ++DS      + L G+         G  + +K     RIL++RLEI+IE +LQ ADFAIEEEAVK+G+EE+KKKLGVFMK+
Subjt:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

XP_022763581.1 UPF0496 protein At4g34320-like [Durio zibethinus]

5.0e-09

45.65

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Query:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS
        +TA   G++G ++DS      + L G+         G  + ++     RIL+++LEIEIE +LQ ADFAIEEEAVK+G++E+KKKLGVFMK+
Subjt:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

XP_023007494.1 UPF0496 protein At4g34320-like [Cucurbita maxima]

6.5e-09

51.16

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Query:  GAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS
        G++G ++DS      + L G+         G  + +K     R+LV +LE E+EGML+KA+FAIEEEAVKVGVEEMKKKL VFMKS
Subjt:  GAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

XP_039018408.1 UPF0496 protein At4g34320-like [Hibiscus syriacus]

3.8e-09

46.74

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Query:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS
        +T+   G++G ++DS      + L G+         G  + +K     RILV+RLEIEIE +LQ ADFAIE+EAVK+G++E+KKKLGVFMK+
Subjt:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

TrEMBL top hits

e value

%identity

Alignment

A0A1R3GZL5 Uncharacterized protein

1.4e-09

46.74

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Query:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS
        +T+   G++G ++DS      + L G+         G  + +K     RIL++RLEI+IE +LQ ADFAIEEEAVK+G+EE+KKKLGVFMK+
Subjt:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

A0A6A2Z6T6 UPF0496 protein 1

1.8e-09

46.74

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Query:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS
        +T+   G++G ++DS      + L G+         G  + +K     RILV+RLEIEIE +LQ ADFAIE+EAVK+G++E+KKKLGVFMK+
Subjt:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

A0A6A3CER2 UPF0496 protein 1

2.4e-09

45.65

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Query:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS
        +T+   G++G ++DS      + L G+         G  + +K     R+LV+RLEIEIE +LQ ADFAIE+EAVK+G++E+KKKLGVFMK+
Subjt:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

A0A6J1L534 UPF0496 protein At4g34320-like

3.1e-09

51.16

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Query:  GAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS
        G++G ++DS      + L G+         G  + +K     R+LV +LE E+EGML+KA+FAIEEEAVKVGVEEMKKKL VFMKS
Subjt:  GAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

A0A6P6AFI9 UPF0496 protein At4g34320-like

2.4e-09

45.65

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Query:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS
        +TA   G++G ++DS      + L G+         G  + ++     RIL+++LEIEIE +LQ ADFAIEEEAVK+G++E+KKKLGVFMK+
Subjt:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

SwissProt top hits

e value

%identity

Alignment

A2XDK8 UPF0496 protein 1

5.4e-06

40.23

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Query:  GAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFA-IEEEAVKVGVEEMKKKLGVFMKS
        G++G ++DS        L G+         G  + +K   + R+L+ R+E+EI  M+   +FA  +EEAVK GVEE+KKKL VFMKS
Subjt:  GAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFA-IEEEAVKVGVEEMKKKLGVFMKS

A2Z6C5 Putative UPF0496 protein 5

1.6e-05

37.93

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Query:  GAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFA-IEEEAVKVGVEEMKKKLGVFMKS
        G+ G ++DS        LHG          G  + +K   + R+LVE LE++I  M    +FA  +EEAV+ G++E+KKKL +FMKS
Subjt:  GAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFA-IEEEAVKVGVEEMKKKLGVFMKS

Q10QE9 UPF0496 protein 1

5.4e-06

40.23

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Query:  GAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFA-IEEEAVKVGVEEMKKKLGVFMKS
        G++G ++DS        L G+         G  + +K   + R+L+ R+E+EI  M+   +FA  +EEAVK GVEE+KKKL VFMKS
Subjt:  GAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFA-IEEEAVKVGVEEMKKKLGVFMKS

Q7XFE1 Putative UPF0496 protein 5

1.6e-05

37.93

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Query:  GAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFA-IEEEAVKVGVEEMKKKLGVFMKS
        G+ G ++DS        LHG          G  + +K   + R+LVE LE++I  M    +FA  +EEAV+ G++E+KKKL +FMKS
Subjt:  GAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFA-IEEEAVKVGVEEMKKKLGVFMKS

Q9SYZ7 UPF0496 protein At4g34320

2.0e-08

39.13

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Query:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS
        +TA   G++G ++DS      + L G+         G  + +K     R+L+ERLEIEI GM++ A+FA+E  AVK+G++++KKKL VF K+
Subjt:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

Arabidopsis top hits

e value

%identity

Alignment

AT2G18630.1 Protein of unknown function (DUF677)

1.6e-05

43.86

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Query:  GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAI-EEEAVKVGVEEMKKKLGVFMKS
        G  + +K      ILV ++E+EIE +L+KA+FAI EE+ V++ ++E+KKKL VF ++
Subjt:  GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAI-EEEAVKVGVEEMKKKLGVFMKS

AT4G34320.1 Protein of unknown function (DUF677)

1.4e-09

39.13

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Query:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS
        +TA   G++G ++DS      + L G+         G  + +K     R+L+ERLEIEI GM++ A+FA+E  AVK+G++++KKKL VF K+
Subjt:  STAFGSGAIGSFLDS------SGLHGK---------GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

AT5G66675.1 Protein of unknown function (DUF677)

6.7e-04

40.35

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Query:  GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAI----EEEAVKVGVEEMKKKLGVF
        G  + +K     R+ V++L+IE+E M+QK DFA+    EE AV++ + E+ KK  VF
Subjt:  GRTLPLKTWTAFRILVERLEIEIEGMLQKADFAI----EEEAVKVGVEEMKKKLGVF

Sequences

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CDS sequence

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ATGCCTCCTCGAAATGAACCAGGAGGTGGTTCGAGACATTCTCCAGTGCAAGAAGGACATTTGGATGAGCCAGGAGCTGTTCGAGCTCGTCGAGGACTACTTCGAGAACA
GCCTGCAGAGGCTGGACTTCTGTACTGCTCTGGAAAAGTGCCTCAAGCGAGCTCGGGACAGTCAGCTGCTGATTCTAATGGCGCTCCGGCAGTTCGAGGAGGACGAAACT
CAAGTAATGCTGGAGAAGCTTCAACAGAAGAAAAACAAACTCGACAAGAAGCTCAAGTCCATCAACACATGGAGGAAGCTCTCGTGCGTGATGTTCGCGGCCACGTTCTC
CCCCGTGTTGATCTGCTCGTTGGTGGCGACGGTGATCGCAGCACCGCCTTTGGCAGCGGTGCTATCGGCAGCTTCCTCGATTCCTCTGGGCTCCATGGGAAAGGACGTAC
ATTGCCATTAAAGACATGGACAGCATTTCGGATTCTGGTGGAAAGGCTGGAGATCGAGATCGAGGGCATGTTGCAGAAGGCGGATTTCGCCATTGAAGAGGAGGCTGTGA
AGGTTGGAGTGGAGGAGATGAAGAAGAAGCTTGGAGTGTTCATGAAGAGC

mRNA sequence

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Protein sequence

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MPPRNEPGGGSRHSPVQEGHLDEPGAVRARRGLLREQPAEAGLLYCSGKVPQASSGQSAADSNGAPAVRGGRNSSNAGEASTEEKQTRQEAQVHQHMEEALVRDVRGHVL
PRVDLLVGGDGDRSTAFGSGAIGSFLDSSGLHGKGRTLPLKTWTAFRILVERLEIEIEGMLQKADFAIEEEAVKVGVEEMKKKLGVFMKS

Spg037468 (gene) of Sponge gourd (cylindrica) v1 genome