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Spg037477 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037477
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionNuclear transport factor 2B
Genome locationscaffold11:32968866..32975563
RNA-Seq ExpressionSpg037477
SyntenySpg037477
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044571.1 uncharacterized protein E6C27_scaffold46G003210 [Cucumis melo var. makuwa]1.1e-5370.97Show/hide
Query:  MELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIEEEMVKEIK
        MELISLAIR+L+ EN +R  + RSS  D DTD+DD+QLLS+LLS+VESTREEQRL H    +  ED +II TN E   E NVE S  +VK  EE+VKE+K
Subjt:  MELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIEEEMVKEIK

Query:  EVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSD
        EVK+QNF+THCLVSAMIILTV WQ+SEVS ILKL+DG LSNPFKSL  ILKRKTTSAIQ+QIEATELP LN+PA+PHVSLPDFD D
Subjt:  EVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSD

KAE8649098.1 hypothetical protein Csa_015237 [Cucumis sativus]4.4e-5572.83Show/hide
Query:  MELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIEEEMVKEIK
        MELISLAIR+L+ EN  R  + RSS AD D D+DD+QLLSRLLS+VESTR EQRL HS+     ED +II TN E   E NVE S  ++K  EE+VKE+K
Subjt:  MELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIEEEMVKEIK

Query:  EVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFD
        EVK+QNFITHCLVSAMIILTV WQ+SEVS ILKL+DG LSNPFKSLA ILKRKTTSAIQ+QIEATELPHLN+PALPHV+LPDFD
Subjt:  EVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFD

XP_004152113.1 uncharacterized protein LOC101214522 [Cucumis sativus]2.4e-5672.92Show/hide
Query:  MAEAAE-EMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIE
        MAEAA  EMELISLAIR+L+ EN  R  + RSS AD D D+DD+QLLSRLLS+VESTR EQRL HS+     ED +II TN E   E NVE S  ++K  
Subjt:  MAEAAE-EMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIE

Query:  EEMVKEIKEVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFD
        EE+VKE+KEVK+QNFITHCLVSAMIILTV WQ+SEVS ILKL+DG LSNPFKSLA ILKRKTTSAIQ+QIEATELPHLN+PALPHV+LPDFD
Subjt:  EEMVKEIKEVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFD

XP_008454012.1 PREDICTED: uncharacterized protein LOC103494562 [Cucumis melo]5.8e-5571.05Show/hide
Query:  AAEEMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIEEEMV
        A EEMELISLAIR+L+ EN +R  + RSS  D DTD+DD+QLLS+LLS+VESTREEQRL H    +  ED +II TN E   E NVE S  +VK  EE+V
Subjt:  AAEEMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIEEEMV

Query:  KEIKEVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSD
        KE+KEVK+QNF+THCLVSAMIILTV WQ+SEVS ILKL+DG LSNPFKSL  ILKRKTTSAIQ+QIEATELP LN+PA+PHVSLPDFD D
Subjt:  KEIKEVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSD

XP_038895500.1 uncharacterized protein LOC120083719 [Benincasa hispida]1.5e-6677.32Show/hide
Query:  MAEAAEEMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSENVESSG-SRVKIEE
        MAEA EEMELISLAIR+L+ E+ +R A+ RSSGA    D+ DLQLLSRLLSQVESTREEQRL HSQ+SA  +DEKII T  E  SENVE SG +RVKIE+
Subjt:  MAEAAEEMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSENVESSG-SRVKIEE

Query:  EMVKEIKEVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDGLSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSDGK
         +VKE+KEVKRQNFITHCLVSAMIILTV WQVSEVS ILKL++GLSNPFKSL  ILKRKTTSAIQ+QIEATELPHLNMPALPHV+LP+FD DG+
Subjt:  EMVKEIKEVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDGLSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSDGK

TrEMBL top hitse value%identityAlignment
A0A0A0KTW6 Uncharacterized protein1.1e-5672.92Show/hide
Query:  MAEAAE-EMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIE
        MAEAA  EMELISLAIR+L+ EN  R  + RSS AD D D+DD+QLLSRLLS+VESTR EQRL HS+     ED +II TN E   E NVE S  ++K  
Subjt:  MAEAAE-EMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIE

Query:  EEMVKEIKEVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFD
        EE+VKE+KEVK+QNFITHCLVSAMIILTV WQ+SEVS ILKL+DG LSNPFKSLA ILKRKTTSAIQ+QIEATELPHLN+PALPHV+LPDFD
Subjt:  EEMVKEIKEVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFD

A0A1S3BXR6 uncharacterized protein LOC1034945622.8e-5571.05Show/hide
Query:  AAEEMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIEEEMV
        A EEMELISLAIR+L+ EN +R  + RSS  D DTD+DD+QLLS+LLS+VESTREEQRL H    +  ED +II TN E   E NVE S  +VK  EE+V
Subjt:  AAEEMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIEEEMV

Query:  KEIKEVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSD
        KE+KEVK+QNF+THCLVSAMIILTV WQ+SEVS ILKL+DG LSNPFKSL  ILKRKTTSAIQ+QIEATELP LN+PA+PHVSLPDFD D
Subjt:  KEIKEVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSD

A0A5A7TSP6 Uncharacterized protein5.3e-5470.97Show/hide
Query:  MELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIEEEMVKEIK
        MELISLAIR+L+ EN +R  + RSS  D DTD+DD+QLLS+LLS+VESTREEQRL H    +  ED +II TN E   E NVE S  +VK  EE+VKE+K
Subjt:  MELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIEEEMVKEIK

Query:  EVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSD
        EVK+QNF+THCLVSAMIILTV WQ+SEVS ILKL+DG LSNPFKSL  ILKRKTTSAIQ+QIEATELP LN+PA+PHVSLPDFD D
Subjt:  EVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSD

A0A5D3CZN3 Uncharacterized protein3.9e-4970.52Show/hide
Query:  ENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIEEEMVKEIKEVKRQNFITHCLV
        EN +R  + RSS  D DTD+DD+QLLS+LLS+VESTREEQRL H    +  ED +II TN E   E NVE S  +VK  EE+VKE+KEVK+QNF+THCLV
Subjt:  ENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSE-NVESSGSRVKIEEEMVKEIKEVKRQNFITHCLV

Query:  SAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSD
        SAMIILTV WQ+SEVS ILKL+DG LSNPFKSL  ILKRKTTSAIQ+QIEATELP LN+PA+PHVSLPDFD D
Subjt:  SAMIILTVVWQVSEVSLILKLKDG-LSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSD

A0A6J1CVQ0 uncharacterized protein LOC1110147251.2e-5071.84Show/hide
Query:  ENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSENVESSGSRVKIEEE-MVKEIKEVKRQNFITHCLV
        E  + AA+ RSSGA      DDL LLSRLLSQVESTREEQR KHSQLSA  ED              VE S ++V+ EEE +VKE++EVKRQNFITHCLV
Subjt:  ENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSENVESSGSRVKIEEE-MVKEIKEVKRQNFITHCLV

Query:  SAMIILTVVWQVSEVSLILKLKDGLSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSDGK
        SAMIILTV WQVSEVS ILKL+ GLSNPFKSLA+ILK+KTTSAI NQIEATELPHLNMPALPHVSLPDFD DG+
Subjt:  SAMIILTVVWQVSEVSLILKLKDGLSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSDGK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G27300.1 unknown protein3.3e-1637.78Show/hide
Query:  EAAEEMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSENVESSGSRVKIE----
        E++E++E +S AI KL+ E   R A    SG     D+DD   LS L+SQ+ES   + +           ++ I     E   E+ +SS S+ K E    
Subjt:  EAAEEMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSENVESSGSRVKIE----

Query:  -----EEMVKEIKEVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDGLSNPFKSLARILK---RKTTSAIQNQIEAT
             EE+ K+IK+VK+QN ITH L+SA IILT+VWQ+SE S+I  LKD +S+P +S+  +L    +     I+NQ+  T
Subjt:  -----EEMVKEIKEVKRQNFITHCLVSAMIILTVVWQVSEVSLILKLKDGLSNPFKSLARILK---RKTTSAIQNQIEAT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGAGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATCCGAAAATTGATTGGGGAGAACAGCAGCAGAGCCGCCGCTCGTCGGAGCTCCGGCGCCGACGACGA
TACCGACTCCGACGATCTGCAACTTCTTTCCCGATTGCTATCTCAGGTGGAATCAACAAGAGAAGAACAGAGGCTCAAGCACTCCCAACTTTCAGCTCTACATGAGGATG
AGAAAATAATTGCTACAAACTCAGAGACTCTAAGTGAAAATGTTGAAAGTAGTGGAAGCAGAGTGAAAATAGAAGAAGAGATGGTGAAAGAGATAAAAGAAGTGAAGAGG
CAGAATTTCATAACTCACTGCCTTGTTTCAGCGATGATTATCCTCACTGTTGTTTGGCAAGTCTCTGAGGTGTCTCTAATTTTGAAACTCAAAGATGGGTTGAGCAACCC
ATTCAAATCCCTAGCCAGAATCCTAAAAAGGAAGACAACTTCAGCAATACAAAATCAGATTGAAGCTACTGAATTGCCTCATCTTAATATGCCTGCCCTACCTCATGTGA
GCCTACCAGACTTTGACTCAGATGGGAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGAGGCGGCGGAGGAGATGGAGCTCATCAGCCTTGCGATCCGAAAATTGATTGGGGAGAACAGCAGCAGAGCCGCCGCTCGTCGGAGCTCCGGCGCCGACGACGA
TACCGACTCCGACGATCTGCAACTTCTTTCCCGATTGCTATCTCAGGTGGAATCAACAAGAGAAGAACAGAGGCTCAAGCACTCCCAACTTTCAGCTCTACATGAGGATG
AGAAAATAATTGCTACAAACTCAGAGACTCTAAGTGAAAATGTTGAAAGTAGTGGAAGCAGAGTGAAAATAGAAGAAGAGATGGTGAAAGAGATAAAAGAAGTGAAGAGG
CAGAATTTCATAACTCACTGCCTTGTTTCAGCGATGATTATCCTCACTGTTGTTTGGCAAGTCTCTGAGGTGTCTCTAATTTTGAAACTCAAAGATGGGTTGAGCAACCC
ATTCAAATCCCTAGCCAGAATCCTAAAAAGGAAGACAACTTCAGCAATACAAAATCAGATTGAAGCTACTGAATTGCCTCATCTTAATATGCCTGCCCTACCTCATGTGA
GCCTACCAGACTTTGACTCAGATGGGAAATAA
Protein sequenceShow/hide protein sequence
MAEAAEEMELISLAIRKLIGENSSRAAARRSSGADDDTDSDDLQLLSRLLSQVESTREEQRLKHSQLSALHEDEKIIATNSETLSENVESSGSRVKIEEEMVKEIKEVKR
QNFITHCLVSAMIILTVVWQVSEVSLILKLKDGLSNPFKSLARILKRKTTSAIQNQIEATELPHLNMPALPHVSLPDFDSDGK