; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037533 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037533
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationscaffold11:31538437..31547650
RNA-Seq ExpressionSpg037533
SyntenySpg037533
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0005840 - ribosome (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR000589 - Ribosomal protein S15
IPR006941 - Ribonuclease CAF1
IPR009068 - S15/NS1, RNA-binding
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044544.1 putative CCR4-associated factor 1-like protein 8 [Cucumis melo var. makuwa]5.9e-9569.02Show/hide
Query:  MTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTS
        M+ VRQVW HNL QEL +LN  L +FPV+A DTEFPGFLR T RGAP+EHFY+DLKFN+NHLKILQLGLTL +E+  V ++W F FSDFDE TD  SPTS
Subjt:  MTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTS

Query:  IQFLKS-KGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGL
        IQ+LK+ KGF+F K R  GIPS +FRRAFLPI  SNRI KW+TFHG YDVAYLLKL+MI+TMP+S+  FA  AQR LGTV+DLKH+IRNC+YL+NGELGL
Subjt:  IQFLKS-KGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGL

Query:  EKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR
        ++LA+LLNV  N T  + GSDSLL A  Y KMKK  +FS E  DGFLYG HYRIR
Subjt:  EKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR

KAE8649090.1 hypothetical protein Csa_014788 [Cucumis sativus]7.2e-8566.53Show/hide
Query:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTSIQF
        VRQVW HNL QELA+LN  L +FPV+  DTEFPGFLR TPRGAPQEH Y+DLKFNVNHLKILQLGLTL +E+  V ++W F FSDFDE TDL SPTS+Q+
Subjt:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTSIQF

Query:  LK-SKGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGLEKL
        LK +KGF+F K R  GIPS +FRRAFLPI  SNRI KW+TFHG YDVAYLLKL++IK MP+S+  FA  AQR LGTV+DLK++I +C+ L+ GELGL++L
Subjt:  LK-SKGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGLEKL

Query:  AKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLY
        A+LL+V  N T    GSDSLL A  YVKMKK  + S E+  GFLY
Subjt:  AKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLY

XP_004151393.1 putative CCR4-associated factor 1 homolog 8 [Cucumis sativus]4.1e-8866.67Show/hide
Query:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTSIQF
        VRQVW HNL QELA+LN  L +FPV+  DTEFPGFLR TPRGAPQEH Y+DLKFNVNHLKILQLGLTL +E+  V ++W F FSDFDE TDL SPTS+Q+
Subjt:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTSIQF

Query:  LK-SKGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGLEKL
        LK +KGF+F K R  GIPS +FRRAFLPI  SNRI KW+TFHG YDVAYLLKL++IK MP+S+  FA  AQR LGTV+DLK++I +C+ L+ GELGL++L
Subjt:  LK-SKGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGLEKL

Query:  AKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR
        A+LL+V  N T    GSDSLL A  YVKMKK  + S E+  GFLYG  YRIR
Subjt:  AKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR

XP_008454486.1 PREDICTED: putative CCR4-associated factor 1 homolog 8 [Cucumis melo]1.0e-9468.63Show/hide
Query:  MTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTS
        M+ VR+VW HN  QELA+LN  L +FPV+A DTEFPGFLR TPRGAP+EHFY+DLKFN+NHLKILQLGLTL +E+  V ++W F FSDFDE TD  SPTS
Subjt:  MTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTS

Query:  IQFLKS-KGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGL
        IQ+LK+ KGF+F K R  GIPS +FRRAFLPI  SNRI KW+TFHG YDVAYLLKL+MI+TMP+S+  FA  AQR LGTV+DLKH+IRNC+YL+NGELGL
Subjt:  IQFLKS-KGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGL

Query:  EKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR
        ++LA+LLNV  N T  + GSDSLL A  Y KMKK  +FS E  DGFLYG +YRIR
Subjt:  EKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR

XP_038890962.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]4.7e-10070.98Show/hide
Query:  MTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTS
        M LVRQVWSHNL +ELA+ N  LS+FPV+  DTEFPGF+R TPRGAP+EH Y+DLKFN+NHLKILQLGLTL +E+G+V MTWEF FSDFDE TDL +PTS
Subjt:  MTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTS

Query:  IQFLKSKGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGLE
        IQFLK+KG DF K R +GI S +F+ AFLPI CSNRI KW+TFHG YDVAYLLKL++IK+MP+S+  FA  A+  LGTVSDLK+IIRNC+YLLNGELGL+
Subjt:  IQFLKSKGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGLE

Query:  KLAKLLNVERNGTAHH-AGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR
        KLAKLLN+  +   HH AG DSLL AS Y KMKK  EFS E+ DGFLYGL+YRIR
Subjt:  KLAKLLNVERNGTAHH-AGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR

TrEMBL top hitse value%identityAlignment
A0A0A0KTU4 Poly(A)-specific ribonuclease2.0e-8866.67Show/hide
Query:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTSIQF
        VRQVW HNL QELA+LN  L +FPV+  DTEFPGFLR TPRGAPQEH Y+DLKFNVNHLKILQLGLTL +E+  V ++W F FSDFDE TDL SPTS+Q+
Subjt:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTSIQF

Query:  LK-SKGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGLEKL
        LK +KGF+F K R  GIPS +FRRAFLPI  SNRI KW+TFHG YDVAYLLKL++IK MP+S+  FA  AQR LGTV+DLK++I +C+ L+ GELGL++L
Subjt:  LK-SKGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGLEKL

Query:  AKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR
        A+LL+V  N T    GSDSLL A  YVKMKK  + S E+  GFLYG  YRIR
Subjt:  AKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR

A0A1S3BY95 Poly(A)-specific ribonuclease4.9e-9568.63Show/hide
Query:  MTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTS
        M+ VR+VW HN  QELA+LN  L +FPV+A DTEFPGFLR TPRGAP+EHFY+DLKFN+NHLKILQLGLTL +E+  V ++W F FSDFDE TD  SPTS
Subjt:  MTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTS

Query:  IQFLKS-KGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGL
        IQ+LK+ KGF+F K R  GIPS +FRRAFLPI  SNRI KW+TFHG YDVAYLLKL+MI+TMP+S+  FA  AQR LGTV+DLKH+IRNC+YL+NGELGL
Subjt:  IQFLKS-KGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGL

Query:  EKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR
        ++LA+LLNV  N T  + GSDSLL A  Y KMKK  +FS E  DGFLYG +YRIR
Subjt:  EKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR

A0A5A7TN62 Poly(A)-specific ribonuclease2.9e-9569.02Show/hide
Query:  MTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTS
        M+ VRQVW HNL QEL +LN  L +FPV+A DTEFPGFLR T RGAP+EHFY+DLKFN+NHLKILQLGLTL +E+  V ++W F FSDFDE TD  SPTS
Subjt:  MTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTS

Query:  IQFLKS-KGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGL
        IQ+LK+ KGF+F K R  GIPS +FRRAFLPI  SNRI KW+TFHG YDVAYLLKL+MI+TMP+S+  FA  AQR LGTV+DLKH+IRNC+YL+NGELGL
Subjt:  IQFLKS-KGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGL

Query:  EKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR
        ++LA+LLNV  N T  + GSDSLL A  Y KMKK  +FS E  DGFLYG HYRIR
Subjt:  EKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR

A0A5D3D333 Poly(A)-specific ribonuclease4.9e-9568.63Show/hide
Query:  MTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTS
        M+ VR+VW HN  QELA+LN  L +FPV+A DTEFPGFLR TPRGAP+EHFY+DLKFN+NHLKILQLGLTL +E+  V ++W F FSDFDE TD  SPTS
Subjt:  MTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTS

Query:  IQFLKS-KGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGL
        IQ+LK+ KGF+F K R  GIPS +FRRAFLPI  SNRI KW+TFHG YDVAYLLKL+MI+TMP+S+  FA  AQR LGTV+DLKH+IRNC+YL+NGELGL
Subjt:  IQFLKS-KGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGL

Query:  EKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR
        ++LA+LLNV  N T  + GSDSLL A  Y KMKK  +FS E  DGFLYG +YRIR
Subjt:  EKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIR

A0A6J1DLA5 Poly(A)-specific ribonuclease2.5e-8354.84Show/hide
Query:  RQVWSHNLPQELALLNACLSQFPVVAFDTEF-----------------------------PGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANES
        R+VWS+NL +EL +LN  L +FP+VA DTEF                             PGFLR TP+G  +E FY+ L+FNVN L ILQLGLTLAN++
Subjt:  RQVWSHNLPQELALLNACLSQFPVVAFDTEF-----------------------------PGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANES

Query:  GDVAMTWEFNFSDFDETTDLHSPTSI-QFLKSKGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQR
        G+VAMTWEFNF DFD  +D+   +S+  FLK+KGFDF K +  GI    F   FLPIC S RI +W+TFHGFYD+AYLLKLL IK +P S+A FAA AQ 
Subjt:  GDVAMTWEFNFSDFDETTDLHSPTSI-QFLKSKGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQR

Query:  LLGTVSDLKHIIRNCDYLLNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIRRRPVIGNVVIPPFRQPPPAA
        LLGTVSDLKH+ R CD LL+G+LGL+KLAKLL+V+R G AH AGSDSLLTA+VY KMK+ F+   E  +GFLYGL +RI+    I  +V P    PPP  
Subjt:  LLGTVSDLKHIIRNCDYLLNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIRRRPVIGNVVIPPFRQPPPAA

Query:  THPTTAANSF
          PT    SF
Subjt:  THPTTAANSF

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 53.3e-4042.11Show/hide
Query:  QVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTSIQFLK
        +VW  N   E+  +  CL     +A DTEFPG L+ TP  A  E  Y D+KFNV++  ++QLGLTL  +   +  TWE N SDF+E+  L +  SI FLK
Subjt:  QVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTSIQFLK

Query:  SKGFDFNKHRNQGIPSPQFRRAFLPICCSNR-IAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGT-VSDLKHIIRNCDYLLNGELGLEKLA
        + G D +K R +GI   +F   F  I        +W+TF G YD AYLLK L  K +P++   F    Q+LLG  V D+K +   C   L+   GL+++A
Subjt:  SKGFDFNKHRNQGIPSPQFRRAFLPICCSNR-IAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGT-VSDLKHIIRNCDYLLNGELGLEKLA

Query:  KLLNVERNGTAHHAGSDSLLTASVYVKM
         +L + R G AHHAGSDS LTA V+ K+
Subjt:  KLLNVERNGTAHHAGSDSLLTASVYVKM

Q9S9P2 Probable CCR4-associated factor 1 homolog 23.8e-4438.64Show/hide
Query:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQ--------EHFYEDLKFNVNHLKILQLGLTLANESGDV-------AMTWEFNFSD
        +R+VW+HNL QE+AL+   +  FP VA DTEFPG +  T    P         E+ Y+ LK NVN LK++QLGLTL++E G++          W+FNF +
Subjt:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQ--------EHFYEDLKFNVNHLKILQLGLTLANESGDV-------AMTWEFNFSD

Query:  FDETTDLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFL--PICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHII
        F+  +D+ +  SI+ L+    D  K+   G+ + +F    +   +  +++I  W+TFH  YD  YLLKLL  K +P+ ++ F  + ++    V D+K+++
Subjt:  FDETTDLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFL--PICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHII

Query:  RNCDYLLNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKK-RFEFSPEHCDGFLYGL
          C  L     GLEK+A+LL V+R G +H AGSDSLLT   ++KMK+  F  S     GFL+GL
Subjt:  RNCDYLLNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKK-RFEFSPEHCDGFLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 63.4e-4541.86Show/hide
Query:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRG---APQEHFYEDLKFNVNHLKILQLGLTLANESG-------DVAMTWEFNFSDFDETT
        +R+VW+ NL +E+ L+   +  FP VA DTEFPG +   P G   +  ++ YE LK NVN LK++QLGLT +NE G       D    W+FNF +FD  +
Subjt:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRG---APQEHFYEDLKFNVNHLKILQLGLTLANESG-------DVAMTWEFNFSDFDETT

Query:  DLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPI-CCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYL
        D+ +  SI+ LK  G D  K+   GI S +F    +      N    W+TFH  YD  YLLKLL  + +P S   F         TV D+KH+++ C+ L
Subjt:  DLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPI-CCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYL

Query:  LNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEH-CDGFLYGL
             GL KLA+LL VER G  H AGSDSLLT+  + K+K+ F   P H   G LYGL
Subjt:  LNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEH-CDGFLYGL

Q9SHJ0 Probable CCR4-associated factor 1 homolog 14.4e-4537.99Show/hide
Query:  LVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTSIQ
        L R+VW  N+ +E+A +  CL +FP++AFDTE+PG +  T   +  +  Y  +K NV + K++Q G TL N  G++   WE NFS+F + +D  +  SI+
Subjt:  LVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTSIQ

Query:  FLKSKGFDFNKHRNQGIPSPQFRRAFLP----ICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELG
        FL+  G D  K R++G+    F   F P    +  S +  +++TF G YD AY L +L    +P++   FA +  ++ G V D K +   C+  L   LG
Subjt:  FLKSKGFDFNKHRNQGIPSPQFRRAFLP----ICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELG

Query:  LEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIRRRPVIGNVVIPPFRQPPPAATHP
        L KLA+LL + R G AHHAGSDSL+TA V++K+K  +E S      F  GL Y I +     N+V  P   P P  T P
Subjt:  LEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIRRRPVIGNVVIPPFRQPPPAATHP

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.2e-4540.93Show/hide
Query:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRG---APQEHFYEDLKFNVNHLKILQLGLTLANESGDVA--------MTWEFNFSDFDET
        +R+VW+ NL  E+AL+   +  FP VA DTEFPG + C P G      E+ YE LK NVN LK++QLGLT ++E G++           W+FNF +FD  
Subjt:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRG---APQEHFYEDLKFNVNHLKILQLGLTLANESGDVA--------MTWEFNFSDFDET

Query:  TDLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPI-CCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDY
        +D+++  SI+ L+  G DF K+   GI S +F    +      N    W+TFH  YD  YLLKLL  + +P++   F          V D+KH+++ C+ 
Subjt:  TDLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPI-CCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDY

Query:  LLNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEF-SPEHCDGFLYGL
        L     GL KLA+LL+VER G  H AGSDSLLT+  + K+++ F   S E   G LYGL
Subjt:  LLNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEF-SPEHCDGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.2e-4637.99Show/hide
Query:  LVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTSIQ
        L R+VW  N+ +E+A +  CL +FP++AFDTE+PG +  T   +  +  Y  +K NV + K++Q G TL N  G++   WE NFS+F + +D  +  SI+
Subjt:  LVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETTDLHSPTSIQ

Query:  FLKSKGFDFNKHRNQGIPSPQFRRAFLP----ICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELG
        FL+  G D  K R++G+    F   F P    +  S +  +++TF G YD AY L +L    +P++   FA +  ++ G V D K +   C+  L   LG
Subjt:  FLKSKGFDFNKHRNQGIPSPQFRRAFLP----ICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELG

Query:  LEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIRRRPVIGNVVIPPFRQPPPAATHP
        L KLA+LL + R G AHHAGSDSL+TA V++K+K  +E S      F  GL Y I +     N+V  P   P P  T P
Subjt:  LEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIRRRPVIGNVVIPPFRQPPPAATHP

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.4e-4641.86Show/hide
Query:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRG---APQEHFYEDLKFNVNHLKILQLGLTLANESG-------DVAMTWEFNFSDFDETT
        +R+VW+ NL +E+ L+   +  FP VA DTEFPG +   P G   +  ++ YE LK NVN LK++QLGLT +NE G       D    W+FNF +FD  +
Subjt:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRG---APQEHFYEDLKFNVNHLKILQLGLTLANESG-------DVAMTWEFNFSDFDETT

Query:  DLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPI-CCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYL
        D+ +  SI+ LK  G D  K+   GI S +F    +      N    W+TFH  YD  YLLKLL  + +P S   F         TV D+KH+++ C+ L
Subjt:  DLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPI-CCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYL

Query:  LNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEH-CDGFLYGL
             GL KLA+LL VER G  H AGSDSLLT+  + K+K+ F   P H   G LYGL
Subjt:  LNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEH-CDGFLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.4e-4641.86Show/hide
Query:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRG---APQEHFYEDLKFNVNHLKILQLGLTLANESG-------DVAMTWEFNFSDFDETT
        +R+VW+ NL +E+ L+   +  FP VA DTEFPG +   P G   +  ++ YE LK NVN LK++QLGLT +NE G       D    W+FNF +FD  +
Subjt:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRG---APQEHFYEDLKFNVNHLKILQLGLTLANESG-------DVAMTWEFNFSDFDETT

Query:  DLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPI-CCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYL
        D+ +  SI+ LK  G D  K+   GI S +F    +      N    W+TFH  YD  YLLKLL  + +P S   F         TV D+KH+++ C+ L
Subjt:  DLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPI-CCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYL

Query:  LNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEH-CDGFLYGL
             GL KLA+LL VER G  H AGSDSLLT+  + K+K+ F   P H   G LYGL
Subjt:  LNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEH-CDGFLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.4e-4641.86Show/hide
Query:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRG---APQEHFYEDLKFNVNHLKILQLGLTLANESG-------DVAMTWEFNFSDFDETT
        +R+VW+ NL +E+ L+   +  FP VA DTEFPG +   P G   +  ++ YE LK NVN LK++QLGLT +NE G       D    W+FNF +FD  +
Subjt:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRG---APQEHFYEDLKFNVNHLKILQLGLTLANESG-------DVAMTWEFNFSDFDETT

Query:  DLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPI-CCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYL
        D+ +  SI+ LK  G D  K+   GI S +F    +      N    W+TFH  YD  YLLKLL  + +P S   F         TV D+KH+++ C+ L
Subjt:  DLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPI-CCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYL

Query:  LNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEH-CDGFLYGL
             GL KLA+LL VER G  H AGSDSLLT+  + K+K+ F   P H   G LYGL
Subjt:  LNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEH-CDGFLYGL

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein8.3e-4740.93Show/hide
Query:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRG---APQEHFYEDLKFNVNHLKILQLGLTLANESGDVA--------MTWEFNFSDFDET
        +R+VW+ NL  E+AL+   +  FP VA DTEFPG + C P G      E+ YE LK NVN LK++QLGLT ++E G++           W+FNF +FD  
Subjt:  VRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRG---APQEHFYEDLKFNVNHLKILQLGLTLANESGDVA--------MTWEFNFSDFDET

Query:  TDLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPI-CCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDY
        +D+++  SI+ L+  G DF K+   GI S +F    +      N    W+TFH  YD  YLLKLL  + +P++   F          V D+KH+++ C+ 
Subjt:  TDLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPI-CCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDY

Query:  LLNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEF-SPEHCDGFLYGL
        L     GL KLA+LL+VER G  H AGSDSLLT+  + K+++ F   S E   G LYGL
Subjt:  LLNGELGLEKLAKLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEF-SPEHCDGFLYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTTGTTGCGGTGCTGTGGGTGGCGTTCGACGTTGTGCATGCTGGTTGGTGGTATTCACGAGTCGGTTTGTGGCGGAGCTCGTCAGAGCTTGGCTTCAAATGATGC
AGTAGTCACCGGAGTTAATGGTGGTAGATGTAGGATGGAGGAAGAAGAAAGTGGTGGAGGTCACTTTGTGTTTATAGAAAGAGGGTTTTATGGGGAAAGAGAGAGAAAAA
TCGCTTCTAATCTTTGGTTATCGAAATTTGTCTCCCGCTCCCGCCTTTCTCTTCACTCTGTACTCTCTGGTTTGGTTGCTTCTTCCTCGTTGGCGACTGGCGAGGACTTG
GGTGTGCTGCGCTTTCGTTGTCGATCAAAGAGAACAAAAACCTTGACAATCATGACTTTGGTTCGACAAGTTTGGTCTCACAATCTCCCACAAGAGCTGGCCCTTCTCAA
CGCCTGTCTTTCACAGTTTCCTGTGGTCGCCTTCGACACCGAGTTCCCCGGGTTTCTCCGATGCACTCCGAGAGGTGCTCCACAGGAACACTTCTATGAGGATCTCAAAT
TCAATGTCAACCATTTGAAGATTCTCCAACTGGGTCTCACTCTTGCCAACGAGAGTGGCGATGTTGCCATGACATGGGAGTTCAACTTCAGTGATTTCGATGAAACCACA
GACCTCCACAGTCCAACATCCATCCAATTCTTGAAAAGTAAAGGCTTCGATTTCAACAAACATAGGAACCAAGGAATCCCATCTCCTCAATTTCGACGCGCATTTCTTCC
CATCTGTTGCAGCAATCGCATTGCCAAATGGCTCACCTTCCACGGCTTCTACGACGTCGCTTACCTTCTCAAGCTACTCATGATCAAAACCATGCCGCAATCCCTCGCCG
TCTTCGCCGCCAAAGCCCAGCGTCTCCTCGGCACCGTCAGCGACCTCAAGCACATCATTCGCAACTGCGATTACTTACTCAACGGCGAGCTCGGACTTGAAAAACTCGCC
AAGTTACTCAATGTCGAGCGGAACGGCACTGCCCACCATGCTGGCTCCGACAGTCTCTTGACCGCTTCTGTCTACGTGAAGATGAAGAAGAGGTTCGAGTTTTCGCCGGA
GCATTGCGACGGGTTCTTATACGGTCTGCATTACAGAATCCGACGACGTCCAGTAATTGGGAACGTCGTCATTCCCCCATTTCGTCAACCGCCTCCAGCGGCGACACACC
CAACAACGGCGGCGAACAGCTTCACAAAACCCAGCGACGGCGATGTTCGCGGACGGCCTCACTCGCTAATCTCTAGCCGCTTCGTCTCTGTTCTCGCGCGAACTGCCACA
TACAGCGACAGCCGCTTCGCCATCGCCGTCAGAAATTCATCTATGGGTTTCTTTTCCATTTCATTGTCCCAAATATCTCTTTGTTCTCTGTTCTCTCTTGAAGAGGTAGG
CATCTCTGATATTTGTGTTTGGCATTTTGTCGGCTGTAATCGTCTTGGAAGTATAGATGCGCTTGATACTCAATTTGTTGATGACTTTGAGATCGTGAGTTTCCTAAGAC
TCAACGCTGATTTTGGACTAGCTCCTGAAGTCCCGGAGGATCTTTACCATCTCATCAAGGAAGCTGTTTCAATCCGAAAGCATTTGGAGAGAAACAGGAAAGACAATGAT
TCCAAGTTCAGGTTGATTTTGGTGGAGAGCAGGATCCATCGCCTGACCTGGTATTACAAGAAGACAAAGAAACTTCCCCCTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTTTGTTGCGGTGCTGTGGGTGGCGTTCGACGTTGTGCATGCTGGTTGGTGGTATTCACGAGTCGGTTTGTGGCGGAGCTCGTCAGAGCTTGGCTTCAAATGATGC
AGTAGTCACCGGAGTTAATGGTGGTAGATGTAGGATGGAGGAAGAAGAAAGTGGTGGAGGTCACTTTGTGTTTATAGAAAGAGGGTTTTATGGGGAAAGAGAGAGAAAAA
TCGCTTCTAATCTTTGGTTATCGAAATTTGTCTCCCGCTCCCGCCTTTCTCTTCACTCTGTACTCTCTGGTTTGGTTGCTTCTTCCTCGTTGGCGACTGGCGAGGACTTG
GGTGTGCTGCGCTTTCGTTGTCGATCAAAGAGAACAAAAACCTTGACAATCATGACTTTGGTTCGACAAGTTTGGTCTCACAATCTCCCACAAGAGCTGGCCCTTCTCAA
CGCCTGTCTTTCACAGTTTCCTGTGGTCGCCTTCGACACCGAGTTCCCCGGGTTTCTCCGATGCACTCCGAGAGGTGCTCCACAGGAACACTTCTATGAGGATCTCAAAT
TCAATGTCAACCATTTGAAGATTCTCCAACTGGGTCTCACTCTTGCCAACGAGAGTGGCGATGTTGCCATGACATGGGAGTTCAACTTCAGTGATTTCGATGAAACCACA
GACCTCCACAGTCCAACATCCATCCAATTCTTGAAAAGTAAAGGCTTCGATTTCAACAAACATAGGAACCAAGGAATCCCATCTCCTCAATTTCGACGCGCATTTCTTCC
CATCTGTTGCAGCAATCGCATTGCCAAATGGCTCACCTTCCACGGCTTCTACGACGTCGCTTACCTTCTCAAGCTACTCATGATCAAAACCATGCCGCAATCCCTCGCCG
TCTTCGCCGCCAAAGCCCAGCGTCTCCTCGGCACCGTCAGCGACCTCAAGCACATCATTCGCAACTGCGATTACTTACTCAACGGCGAGCTCGGACTTGAAAAACTCGCC
AAGTTACTCAATGTCGAGCGGAACGGCACTGCCCACCATGCTGGCTCCGACAGTCTCTTGACCGCTTCTGTCTACGTGAAGATGAAGAAGAGGTTCGAGTTTTCGCCGGA
GCATTGCGACGGGTTCTTATACGGTCTGCATTACAGAATCCGACGACGTCCAGTAATTGGGAACGTCGTCATTCCCCCATTTCGTCAACCGCCTCCAGCGGCGACACACC
CAACAACGGCGGCGAACAGCTTCACAAAACCCAGCGACGGCGATGTTCGCGGACGGCCTCACTCGCTAATCTCTAGCCGCTTCGTCTCTGTTCTCGCGCGAACTGCCACA
TACAGCGACAGCCGCTTCGCCATCGCCGTCAGAAATTCATCTATGGGTTTCTTTTCCATTTCATTGTCCCAAATATCTCTTTGTTCTCTGTTCTCTCTTGAAGAGGTAGG
CATCTCTGATATTTGTGTTTGGCATTTTGTCGGCTGTAATCGTCTTGGAAGTATAGATGCGCTTGATACTCAATTTGTTGATGACTTTGAGATCGTGAGTTTCCTAAGAC
TCAACGCTGATTTTGGACTAGCTCCTGAAGTCCCGGAGGATCTTTACCATCTCATCAAGGAAGCTGTTTCAATCCGAAAGCATTTGGAGAGAAACAGGAAAGACAATGAT
TCCAAGTTCAGGTTGATTTTGGTGGAGAGCAGGATCCATCGCCTGACCTGGTATTACAAGAAGACAAAGAAACTTCCCCCTGTTTAG
Protein sequenceShow/hide protein sequence
MGLLRCCGWRSTLCMLVGGIHESVCGGARQSLASNDAVVTGVNGGRCRMEEEESGGGHFVFIERGFYGERERKIASNLWLSKFVSRSRLSLHSVLSGLVASSSLATGEDL
GVLRFRCRSKRTKTLTIMTLVRQVWSHNLPQELALLNACLSQFPVVAFDTEFPGFLRCTPRGAPQEHFYEDLKFNVNHLKILQLGLTLANESGDVAMTWEFNFSDFDETT
DLHSPTSIQFLKSKGFDFNKHRNQGIPSPQFRRAFLPICCSNRIAKWLTFHGFYDVAYLLKLLMIKTMPQSLAVFAAKAQRLLGTVSDLKHIIRNCDYLLNGELGLEKLA
KLLNVERNGTAHHAGSDSLLTASVYVKMKKRFEFSPEHCDGFLYGLHYRIRRRPVIGNVVIPPFRQPPPAATHPTTAANSFTKPSDGDVRGRPHSLISSRFVSVLARTAT
YSDSRFAIAVRNSSMGFFSISLSQISLCSLFSLEEVGISDICVWHFVGCNRLGSIDALDTQFVDDFEIVSFLRLNADFGLAPEVPEDLYHLIKEAVSIRKHLERNRKDND
SKFRLILVESRIHRLTWYYKKTKKLPPV