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Spg037691 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037691
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationscaffold1:33800969..33802963
RNA-Seq ExpressionSpg037691
SyntenySpg037691
Gene Ontology termsGO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037515.1 uncharacterized protein E6C27_scaffold277G001260 [Cucumis melo var. makuwa]1.8e-1048.42Show/hide
Query:  LSYTEGTKRPRGNRSGLQTRELAK-----------------IVEIELPVPDTLSTSAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGVT
        +S  E  + PRGNR  LQT EL K                 IVEIELPV DTL  SAESS         + EDDV WLH +FR + AGGP GGVT
Subjt:  LSYTEGTKRPRGNRSGLQTRELAK-----------------IVEIELPVPDTLSTSAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGVT

KAA0051980.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]2.2e-1140.91Show/hide
Query:  LFGLSYTEGTKRPRGNRSGLQTRELAK-----------------IVEIELPVPDTLSTSAESS-----------------------------------ML
        LFGL Y EGTKRPRGNR+ LQT EL K                 +VEIELPVPDTL TSAESS                                    +
Subjt:  LFGLSYTEGTKRPRGNRSGLQTRELAK-----------------IVEIELPVPDTLSTSAESS-----------------------------------ML

Query:  QEGQRVSLEEDDVRWLHAIFRAELAGGPRGGV
          G    +  D+V WLHA+F A+ AGGP GGV
Subjt:  QEGQRVSLEEDDVRWLHAIFRAELAGGPRGGV

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]9.7e-1237.82Show/hide
Query:  VGKVHAKPAIVESEFNLSTSGFLFGLSYTEGTK----------------------RPRGNRSGLQTRELAKIVEIELPVPDTLSTSAESS----------
        + KV+AKPAI ES  N      LFGLSY E  +                       PRGNR  L T +L K VEIELPVPDTL TSAESS          
Subjt:  VGKVHAKPAIVESEFNLSTSGFLFGLSYTEGTK----------------------RPRGNRSGLQTRELAKIVEIELPVPDTLSTSAESS----------

Query:  ----------------------MLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGV
                              +  EG    +  DD+ WLHA+F A+ AG P GGV
Subjt:  ----------------------MLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGV

KAA0060199.1 uncharacterized protein E6C27_scaffold386G00120 [Cucumis melo var. makuwa]6.3e-1151.72Show/hide
Query:  RPRGNRSGLQTRELAK-----------------IVEIELPVPDTLSTSAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGVT
        RPRGNR  LQT +L K                 +VEIELPVPDTL TSAES          +  DDV WLHA+FRA+ AGGP GGVT
Subjt:  RPRGNRSGLQTRELAK-----------------IVEIELPVPDTLSTSAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGVT

TYK11725.1 uncharacterized protein E5676_scaffold304G00370 [Cucumis melo var. makuwa]3.4e-0945.1Show/hide
Query:  LSYTEGTKRPRGNRSGLQTRELAK-----------------IVEIELPVPDTLST--------SAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRG
        +S  E  K PRGNR  LQT EL K                 +VEIELPVPDTL T         A S +  EG    +  DDV WLHA+ RA++AGGP G
Subjt:  LSYTEGTKRPRGNRSGLQTRELAK-----------------IVEIELPVPDTLST--------SAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRG

Query:  GV
        GV
Subjt:  GV

TrEMBL top hitse value%identityAlignment
A0A5A7U9X4 DNA/RNA polymerases superfamily protein1.0e-1140.91Show/hide
Query:  LFGLSYTEGTKRPRGNRSGLQTRELAK-----------------IVEIELPVPDTLSTSAESS-----------------------------------ML
        LFGL Y EGTKRPRGNR+ LQT EL K                 +VEIELPVPDTL TSAESS                                    +
Subjt:  LFGLSYTEGTKRPRGNRSGLQTRELAK-----------------IVEIELPVPDTLSTSAESS-----------------------------------ML

Query:  QEGQRVSLEEDDVRWLHAIFRAELAGGPRGGV
          G    +  D+V WLHA+F A+ AGGP GGV
Subjt:  QEGQRVSLEEDDVRWLHAIFRAELAGGPRGGV

A0A5A7UAH6 CCHC-type domain-containing protein4.7e-1237.82Show/hide
Query:  VGKVHAKPAIVESEFNLSTSGFLFGLSYTEGTK----------------------RPRGNRSGLQTRELAKIVEIELPVPDTLSTSAESS----------
        + KV+AKPAI ES  N      LFGLSY E  +                       PRGNR  L T +L K VEIELPVPDTL TSAESS          
Subjt:  VGKVHAKPAIVESEFNLSTSGFLFGLSYTEGTK----------------------RPRGNRSGLQTRELAKIVEIELPVPDTLSTSAESS----------

Query:  ----------------------MLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGV
                              +  EG    +  DD+ WLHA+F A+ AG P GGV
Subjt:  ----------------------MLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGV

A0A5D3BAD1 Retrotrans_gag domain-containing protein3.0e-1151.72Show/hide
Query:  RPRGNRSGLQTRELAK-----------------IVEIELPVPDTLSTSAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGVT
        RPRGNR  LQT +L K                 +VEIELPVPDTL TSAES          +  DDV WLHA+FRA+ AGGP GGVT
Subjt:  RPRGNRSGLQTRELAK-----------------IVEIELPVPDTLSTSAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGVT

A0A5D3BSA6 Retrotrans_gag domain-containing protein8.8e-1148.42Show/hide
Query:  LSYTEGTKRPRGNRSGLQTRELAK-----------------IVEIELPVPDTLSTSAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGVT
        +S  E  + PRGNR  LQT EL K                 IVEIELPV DTL  SAESS         + EDDV WLH +FR + AGGP GGVT
Subjt:  LSYTEGTKRPRGNRSGLQTRELAK-----------------IVEIELPVPDTLSTSAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGVT

A0A5D3CJL4 Retrotrans_gag domain-containing protein1.7e-0945.1Show/hide
Query:  LSYTEGTKRPRGNRSGLQTRELAK-----------------IVEIELPVPDTLST--------SAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRG
        +S  E  K PRGNR  LQT EL K                 +VEIELPVPDTL T         A S +  EG    +  DDV WLHA+ RA++AGGP G
Subjt:  LSYTEGTKRPRGNRSGLQTRELAK-----------------IVEIELPVPDTLST--------SAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRG

Query:  GV
        GV
Subjt:  GV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAGGTAGGAAAAGTTCATGCAAAGCCAGCCATAGTAGAATCTGAGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAACTAAGAG
GCCAAGAGGAAATAGGTCGGGTCTACAGACCAGGGAACTAGCTAAGATTGTAGAGATCGAGCTCCCTGTGCCTGATACACTGTCAACGTCTGCTGAAAGTTCAATGTTAC
AGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTTCGGGCTGAGCTAGCAGGTGGTCCGAGAGGGGGTGTGACA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAGGTAGGAAAAGTTCATGCAAAGCCAGCCATAGTAGAATCTGAGTTCAACCTGTCAACCTCTGGTTTTTTATTCGGTTTGAGCTACACAGAAGGAACTAAGAG
GCCAAGAGGAAATAGGTCGGGTCTACAGACCAGGGAACTAGCTAAGATTGTAGAGATCGAGCTCCCTGTGCCTGATACACTGTCAACGTCTGCTGAAAGTTCAATGTTAC
AGGAGGGTCAACGGGTATCGTTAGAGGAGGACGATGTTCGTTGGCTTCACGCCATCTTTCGGGCTGAGCTAGCAGGTGGTCCGAGAGGGGGTGTGACA
Protein sequenceShow/hide protein sequence
MKKVGKVHAKPAIVESEFNLSTSGFLFGLSYTEGTKRPRGNRSGLQTRELAKIVEIELPVPDTLSTSAESSMLQEGQRVSLEEDDVRWLHAIFRAELAGGPRGGVT