; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037725 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037725
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionCCHC-type domain-containing protein
Genome locationscaffold1:33785057..33787152
RNA-Seq ExpressionSpg037725
SyntenySpg037725
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0040194.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-1654.72Show/hide
Query:  STGFSSKPGGSLVFSGVLSIR---GCTSRIRISI---WPRGCRSSLQTGELDK-----------------TVEIELPVPDTLPTSAGSSRTSSSTWVELY
        STGFSSKPGG LVFS  LSI+       ++ + I   WPRG R  LQTGELDK                  VEIELP+PDTLPTSA SS ++SSTW+ELY
Subjt:  STGFSSKPGGSLVFSGVLSIR---GCTSRIRISI---WPRGCRSSLQTGELDK-----------------TVEIELPVPDTLPTSAGSSRTSSSTWVELY

Query:  IESVHI
         ESVH+
Subjt:  IESVHI

KAA0052218.1 uncharacterized protein E6C27_scaffold207G00290 [Cucumis melo var. makuwa]7.4e-2055.08Show/hide
Query:  IRKAHAKPAIAESGCK------------------TSTGFSSKPGGSLVFSGVLSIRGCTSRIRISIWPRGCRSSLQTGELDKTVEIELPVPDTLPTSAGS
        I K +AKPAIAESGC                    ST F SK GG LVFS  L           SI PRG R +L TG+LDKTVEIELPVPDTLPTSA S
Subjt:  IRKAHAKPAIAESGCK------------------TSTGFSSKPGGSLVFSGVLSIRGCTSRIRISIWPRGCRSSLQTGELDKTVEIELPVPDTLPTSAGS

Query:  SRTSSSTWVELYIESVHI
        S+++SSTW+ELY ESVH+
Subjt:  SRTSSSTWVELYIESVHI

KAA0066795.1 uncharacterized protein E6C27_scaffold271G001440 [Cucumis melo var. makuwa]6.5e-1663.53Show/hide
Query:  STGFSSKPGGSLVFSGVLSIRGC--TSRIRISIWPRGCRSSLQTGELDKTVEIELPVPDTLPTSAGSSRTSSSTWVELYIESVHI
        STG SSKP G LVFS  LS+     + +    +WPRG R SLQT ELDKT  IELPVPDTLPTSA SS ++SSTW+ELY ESVH+
Subjt:  STGFSSKPGGSLVFSGVLSIRGC--TSRIRISIWPRGCRSSLQTGELDKTVEIELPVPDTLPTSAGSSRTSSSTWVELYIESVHI

TYK11835.1 uncharacterized protein E5676_scaffold152G00520 [Cucumis melo var. makuwa]1.4e-1557.58Show/hide
Query:  STGFSSKPGGSLVFSGVLSIRGCTS-RIRISIWPRGCRSSLQTGELDKTV---------------EIELPVPDTLPTSAGSSRTSSSTWVELYIESVHI
        STGFSSKPGG LV S  LSI        ++ + PRG R SLQTGELDKTV                IELPVPDTLPTSA SS ++SSTW+ELY ESVH+
Subjt:  STGFSSKPGGSLVFSGVLSIRGCTS-RIRISIWPRGCRSSLQTGELDKTV---------------EIELPVPDTLPTSAGSSRTSSSTWVELYIESVHI

TYK25935.1 gag/pol protein [Cucumis melo var. makuwa]1.3e-1654.72Show/hide
Query:  STGFSSKPGGSLVFSGVLSIR---GCTSRIRISI---WPRGCRSSLQTGELDK-----------------TVEIELPVPDTLPTSAGSSRTSSSTWVELY
        STGFSSKPGG LVFS  LSI+       ++ + I   WPRG R  LQTGELDK                  VEIELP+PDTLPTSA SS ++SSTW+ELY
Subjt:  STGFSSKPGGSLVFSGVLSIR---GCTSRIRISI---WPRGCRSSLQTGELDK-----------------TVEIELPVPDTLPTSAGSSRTSSSTWVELY

Query:  IESVHI
         ESVH+
Subjt:  IESVHI

TrEMBL top hitse value%identityAlignment
A0A5A7T9P7 Gag/pol protein6.3e-1754.72Show/hide
Query:  STGFSSKPGGSLVFSGVLSIR---GCTSRIRISI---WPRGCRSSLQTGELDK-----------------TVEIELPVPDTLPTSAGSSRTSSSTWVELY
        STGFSSKPGG LVFS  LSI+       ++ + I   WPRG R  LQTGELDK                  VEIELP+PDTLPTSA SS ++SSTW+ELY
Subjt:  STGFSSKPGGSLVFSGVLSIR---GCTSRIRISI---WPRGCRSSLQTGELDK-----------------TVEIELPVPDTLPTSAGSSRTSSSTWVELY

Query:  IESVHI
         ESVH+
Subjt:  IESVHI

A0A5A7UAH6 CCHC-type domain-containing protein3.6e-2055.08Show/hide
Query:  IRKAHAKPAIAESGCK------------------TSTGFSSKPGGSLVFSGVLSIRGCTSRIRISIWPRGCRSSLQTGELDKTVEIELPVPDTLPTSAGS
        I K +AKPAIAESGC                    ST F SK GG LVFS  L           SI PRG R +L TG+LDKTVEIELPVPDTLPTSA S
Subjt:  IRKAHAKPAIAESGCK------------------TSTGFSSKPGGSLVFSGVLSIRGCTSRIRISIWPRGCRSSLQTGELDKTVEIELPVPDTLPTSAGS

Query:  SRTSSSTWVELYIESVHI
        S+++SSTW+ELY ESVH+
Subjt:  SRTSSSTWVELYIESVHI

A0A5D3CJX3 CCHC-type domain-containing protein7.0e-1657.58Show/hide
Query:  STGFSSKPGGSLVFSGVLSIRGCTS-RIRISIWPRGCRSSLQTGELDKTV---------------EIELPVPDTLPTSAGSSRTSSSTWVELYIESVHI
        STGFSSKPGG LV S  LSI        ++ + PRG R SLQTGELDKTV                IELPVPDTLPTSA SS ++SSTW+ELY ESVH+
Subjt:  STGFSSKPGGSLVFSGVLSIRGCTS-RIRISIWPRGCRSSLQTGELDKTV---------------EIELPVPDTLPTSAGSSRTSSSTWVELYIESVHI

A0A5D3DR18 Gag/pol protein6.3e-1754.72Show/hide
Query:  STGFSSKPGGSLVFSGVLSIR---GCTSRIRISI---WPRGCRSSLQTGELDK-----------------TVEIELPVPDTLPTSAGSSRTSSSTWVELY
        STGFSSKPGG LVFS  LSI+       ++ + I   WPRG R  LQTGELDK                  VEIELP+PDTLPTSA SS ++SSTW+ELY
Subjt:  STGFSSKPGGSLVFSGVLSIR---GCTSRIRISI---WPRGCRSSLQTGELDK-----------------TVEIELPVPDTLPTSAGSSRTSSSTWVELY

Query:  IESVHI
         ESVH+
Subjt:  IESVHI

A0A5D3DWP3 Uncharacterized protein3.1e-1663.53Show/hide
Query:  STGFSSKPGGSLVFSGVLSIRGC--TSRIRISIWPRGCRSSLQTGELDKTVEIELPVPDTLPTSAGSSRTSSSTWVELYIESVHI
        STG SSKP G LVFS  LS+     + +    +WPRG R SLQT ELDKT  IELPVPDTLPTSA SS ++SSTW+ELY ESVH+
Subjt:  STGFSSKPGGSLVFSGVLSIRGC--TSRIRISIWPRGCRSSLQTGELDKTVEIELPVPDTLPTSAGSSRTSSSTWVELYIESVHI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAAGCCTGGTCAGAGTCAGGTCCATTCCCTTGAGCACATTAAGGAGAGAGTGAAGGAGGAAGAAGAAGAAGAATTTCGCGGTTTGAGGTTGAAGGAGATAAGAAA
AGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCGGGGGT
GTACAAGTCGAATCAGAATCTCTATTTGGCCAAGAGGATGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTG
CCAACGTCTGCTGGAAGTTCCAGAACAAGTTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGAAGCCTGGTCAGAGTCAGGTCCATTCCCTTGAGCACATTAAGGAGAGAGTGAAGGAGGAAGAAGAAGAAGAATTTCGCGGTTTGAGGTTGAAGGAGATAAGAAA
AGCTCATGCAAAGCCAGCCATAGCAGAATCTGGGTGCAAAACTAGCACAGGATTTTCGAGCAAACCAGGAGGATCTCTGGTGTTCTCTGGTGTTTTGAGCATTCGGGGGT
GTACAAGTCGAATCAGAATCTCTATTTGGCCAAGAGGATGTAGGTCGAGTCTACAAACCGGGGAACTAGATAAGACAGTAGAGATCGAGCTCCCGGTGCCTGATACACTG
CCAACGTCTGCTGGAAGTTCCAGAACAAGTTCCAGTACGTGGGTGGAGTTGTATATTGAGTCTGTTCATATTGTAAATGTTTTGTAA
Protein sequenceShow/hide protein sequence
MSKPGQSQVHSLEHIKERVKEEEEEEFRGLRLKEIRKAHAKPAIAESGCKTSTGFSSKPGGSLVFSGVLSIRGCTSRIRISIWPRGCRSSLQTGELDKTVEIELPVPDTL
PTSAGSSRTSSSTWVELYIESVHIVNVL