CuGenDBv2

Gene ID	Spg037762
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	CcmF_C domain-containing protein
Genome location	scaffold27:65538..66754
RNA-Seq Expression	Spg037762
Synteny	Spg037762
Gene Ontology terms	GO:0017004 - cytochrome complex assembly (biological process) GO:0005739 - mitochondrion (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0003676 - nucleic acid binding (molecular function)
InterPro domains	IPR044955 - Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

CAB4277251.1 unnamed protein product [Prunus armeniaca]

2.0e-102

87.38

Show/hide

Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP
        MRQKLV RTVRRPSPTPAVMVRLRSTN KKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPT HSICGN MIYKPSLTNDRL+FEHD+SLRAD L IN P
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGW----------RRSSGCGASRHFFDGPRPPGLP
        ASY+NGKLEHFLH+WM NREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGW           +SSGCGASRHFFDGPRPPGLP
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGW----------RRSSGCGASRHFFDGPRPPGLP

Query:  ARSEEFMGRRASRT
        ARSEEFMGR+A  T
Subjt:  ARSEEFMGRRASRT

GFS31153.1 hypothetical protein Acr_00g0015910 [Actinidia rufa]

1.6e-91

86.8

Show/hide

Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIF--EHDKSLRADQLPIN
        MRQKLVSRTVRRPSPTPAV VRLRSTN KKI+FTQRLPLGSEL+M KERC LRGLDHLHGPT HSICGNFMIYKPSLTNDRL+   EHD+SLRAD LPIN
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIF--EHDKSLRADQLPIN

Query:  FPASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSGCGASRHFFDGPRPPGLPARSEE
        FPASYENGKLEHFLH+WM N EH NFWLTMF E R FRETTSTTEVAIHTNPFTDLYASIGT SSRT GW +SSGCG  RHFFDGPRPPGLPARSEE
Subjt:  FPASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSGCGASRHFFDGPRPPGLPARSEE

KAF3452199.1 hypothetical protein FNV43_RR08297 [Rhamnella rubrinervis]

3.0e-87

95.21

Show/hide

Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP
        MRQKLV RTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCC RGLDHLHGPTSHSICGNFMIYKP LTNDRL+FEHD+SLRAD LPINFP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGG
        ASYENGKLEHFLH+WM NREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGG
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGG

KJB09756.1 hypothetical protein B456_001G162300 [Gossypium raimondii]

9.4e-129

79.49

Show/hide

Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP
        MRQKLV RTVRRPSPTPAVMVR RSTN KKIQFTQRLPLGSELHMGKERCCLRGLDHLH PT HSICGN MIYKPSLTNDRL+FEHD+SLRAD L INFP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSGCGASRHFFDGPRPPGL-PARSEEFMGR
        ASYENGKLEHFLH+WM NR+HNNFWLTMFPEKRYFRETTSTTEVAIHTN FTDLYASIGTGSSRTGGW +SSGCGASRHFFDGPRPP   PA    FMG 
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSGCGASRHFFDGPRPPGL-PARSEEFMGR

Query:  RASRTRGRALLTKPSLV---------------LADRRW---------EGK-KGSLSSPDGRGQSPITFGASLWSFSLAFPRPLELELVDRPLSTSDALRF
        R +R  GRALLTKPSLV               L  R W         EG+ KGSLSSPD RG+SPITFGA LWSFSLAFPRP  LELVDRPLSTSDA RF
Subjt:  RASRTRGRALLTKPSLV---------------LADRRW---------EGK-KGSLSSPDGRGQSPITFGASLWSFSLAFPRPLELELVDRPLSTSDALRF

Query:  HLGFRTSSPIKQ
        HLGF TSSPIKQ
Subjt:  HLGFRTSSPIKQ

TKS02629.1 hypothetical protein D5086_0000160300 [Populus alba]

6.8e-87

92.49

Show/hide

Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP
        MRQKLVSRTVRRPSPTPAVMVRLRSTN KKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGN MIYKPSLTNDRL+FEHD+SLRAD L INFP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSG
        ASYENGKLEHFLH+WM NREHNNFWLTMFPEKRYFRETTSTTEVAIHTN FTDLYASIGTGSSRTGGW   +G
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSG

TrEMBL top hits

e value

%identity

Alignment

A0A0D2PZN2 Uncharacterized protein

4.5e-129

79.49

Show/hide

Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP
        MRQKLV RTVRRPSPTPAVMVR RSTN KKIQFTQRLPLGSELHMGKERCCLRGLDHLH PT HSICGN MIYKPSLTNDRL+FEHD+SLRAD L INFP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSGCGASRHFFDGPRPPGL-PARSEEFMGR
        ASYENGKLEHFLH+WM NR+HNNFWLTMFPEKRYFRETTSTTEVAIHTN FTDLYASIGTGSSRTGGW +SSGCGASRHFFDGPRPP   PA    FMG 
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSGCGASRHFFDGPRPPGL-PARSEEFMGR

Query:  RASRTRGRALLTKPSLV---------------LADRRW---------EGK-KGSLSSPDGRGQSPITFGASLWSFSLAFPRPLELELVDRPLSTSDALRF
        R +R  GRALLTKPSLV               L  R W         EG+ KGSLSSPD RG+SPITFGA LWSFSLAFPRP  LELVDRPLSTSDA RF
Subjt:  RASRTRGRALLTKPSLV---------------LADRRW---------EGK-KGSLSSPDGRGQSPITFGASLWSFSLAFPRPLELELVDRPLSTSDALRF

Query:  HLGFRTSSPIKQ
        HLGF TSSPIKQ
Subjt:  HLGFRTSSPIKQ

A0A4U5PZ81 Uncharacterized protein

3.3e-87

92.49

Show/hide

Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP
        MRQKLVSRTVRRPSPTPAVMVRLRSTN KKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGN MIYKPSLTNDRL+FEHD+SLRAD L INFP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSG
        ASYENGKLEHFLH+WM NREHNNFWLTMFPEKRYFRETTSTTEVAIHTN FTDLYASIGTGSSRTGGW   +G
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSG

A0A5N5J813 CcmF_C domain-containing protein

5.6e-87

94.64

Show/hide

Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP
        MRQKLVSRTVRRPSPTPAVMVRLRSTN KKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGN MIYKPSLTNDRL+FEHD+SLRAD L INFP
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGW
        ASYENGKLEHFLH+WM NREHNNFWLTMFPEKRYFRETTSTTEVAIHTN FTDLYASIGTGSSRTGGW
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGW

A0A6J5UM80 Uncharacterized protein

9.5e-103

87.38

Show/hide

Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP
        MRQKLV RTVRRPSPTPAVMVRLRSTN KKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPT HSICGN MIYKPSLTNDRL+FEHD+SLRAD L IN P
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFP

Query:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGW----------RRSSGCGASRHFFDGPRPPGLP
        ASY+NGKLEHFLH+WM NREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGW           +SSGCGASRHFFDGPRPPGLP
Subjt:  ASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGW----------RRSSGCGASRHFFDGPRPPGLP

Query:  ARSEEFMGRRASRT
        ARSEEFMGR+A  T
Subjt:  ARSEEFMGRRASRT

A0A7J0DAS0 Uncharacterized protein

7.6e-92

86.8

Show/hide

Query:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIF--EHDKSLRADQLPIN
        MRQKLVSRTVRRPSPTPAV VRLRSTN KKI+FTQRLPLGSEL+M KERC LRGLDHLHGPT HSICGNFMIYKPSLTNDRL+   EHD+SLRAD LPIN
Subjt:  MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIF--EHDKSLRADQLPIN

Query:  FPASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSGCGASRHFFDGPRPPGLPARSEE
        FPASYENGKLEHFLH+WM N EH NFWLTMF E R FRETTSTTEVAIHTNPFTDLYASIGT SSRT GW +SSGCG  RHFFDGPRPPGLPARSEE
Subjt:  FPASYENGKLEHFLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSGCGASRHFFDGPRPPGLPARSEE

SwissProt top hits

e value

%identity

Alignment

P38451 Uncharacterized mitochondrial protein ymf2

5.0e-32

47.51

Show/hide

Query:  TNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSL-----------------------------------
        +NAKKIQFT + PLGSELH+GK R  LRG+D LHGPT HSICGNF+IYKPSL     +FEHD S                                    
Subjt:  TNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSL-----------------------------------

Query:  -RADQLPINFPASYENGKLEHFLHQWMTNREHNNF--WLTMFPEKRYF--RETTSTTEVAIHTNPFTDLYASIGTGSSRTG
         R  ++ + FP +    + + F     T  EHN+F  WLTMFPEKR++   + TSTT+VAIHTN FTDLYA IGTGS  TG
Subjt:  -RADQLPINFPASYENGKLEHFLHQWMTNREHNNF--WLTMFPEKRYF--RETTSTTEVAIHTNPFTDLYASIGTGSSRTG

P93286 Cytochrome c biogenesis CcmF C-terminal-like mitochondrial protein

1.0e-69

83.89

Show/hide

Query:  MVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFPASYENGKLEHFLHQWMTNR
        M+ +  +N KKIQFTQRLPLG ELHMGKERCCLRGLDHLHGPT HSICGN MIYK SLTNDRL+FEHD+SL AD L INFPASY+NGKLEHFLH WM NR
Subjt:  MVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFPASYENGKLEHFLHQWMTNR

Query:  EHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGW
        +HNNFWLTMFPEKRYFRE TST EVAIHTN FTDLYA IGTGSSRTGGW
Subjt:  EHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGW

Arabidopsis top hits

e value

%identity

Alignment

ATMG00180.1 cytochrome C biogenesis 452

1.7e-72

85.23

Show/hide

Query:  MVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFPASYENGKLEHFLHQWMTNR
        M+ +  +N KKIQFTQRLPLG ELHMGKERCCLRGLDHLHGPT HSICGN MIYKPSLTNDRL+FEHD+SL AD L INFPASY+NGKLEHFLH WM NR
Subjt:  MVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFPASYENGKLEHFLHQWMTNR

Query:  EHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGW
        +HNNFWLTMFPEKRYFRE TST EVAIHTN FTDLYASIGTGSSRTGGW
Subjt:  EHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGW

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAGGCAGAAACTCGTCTCACGTACGGTTCGGAGGCCGAGCCCCACCCCAGCAGTAATGGTGCGGCTTAGGTCAACTAACGCAAAGAAGATACAGTTCACTCAACGATT
GCCTTTGGGTTCCGAACTCCATATGGGGAAGGAGCGTTGTTGTTTGCGAGGTCTCGATCATTTACATGGACCCACTTCTCATTCCATTTGTGGTAATTTTATGATCTATA
AACCGTCCCTAACGAACGATCGGCTCATCTTTGAGCATGATAAATCACTTCGTGCCGACCAGTTGCCAATAAACTTTCCGGCCTCATATGAGAATGGAAAACTGGAGCAT
TTTCTGCATCAGTGGATGACGAATCGCGAACATAATAATTTCTGGTTGACCATGTTCCCAGAAAAAAGATACTTTCGAGAAACGACGAGCACGACTGAAGTAGCTATACA
TACAAATCCATTTACGGATCTATATGCTTCGATTGGAACTGGAAGTTCCAGAACGGGCGGCTGGAGGAGAAGTAGTGGCTGCGGCGCGTCAAGGCACTTCTTCGACGGTC
CCCGTCCGCCCGGCCTGCCGGCCCGCTCTGAAGAATTCATGGGCCGGCGAGCCTCCAGGACAAGGGGGCGGGCACTACTAACCAAGCCAAGCCTAGTTCTCGCCGATAGG
CGCTGGGAAGGGAAAAAGGGGTCTCTTTCCTCGCCCGATGGTAGAGGTCAATCCCCTATCACCTTCGGTGCCTCCTTGTGGTCCTTCTCTTTAGCTTTTCCTCGGCCTTT
AGAGTTAGAGCTAGTTGATAGGCCACTTTCCACATCTGATGCATTGAGATTTCATCTTGGATTTCGAACCTCAAGCCCTATCAAGCAAGGGATTCTTCGTCGGATTCGTT
CAAGCCATTGCGAATAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MRQKLVSRTVRRPSPTPAVMVRLRSTNAKKIQFTQRLPLGSELHMGKERCCLRGLDHLHGPTSHSICGNFMIYKPSLTNDRLIFEHDKSLRADQLPINFPASYENGKLEH
FLHQWMTNREHNNFWLTMFPEKRYFRETTSTTEVAIHTNPFTDLYASIGTGSSRTGGWRRSSGCGASRHFFDGPRPPGLPARSEEFMGRRASRTRGRALLTKPSLVLADR
RWEGKKGSLSSPDGRGQSPITFGASLWSFSLAFPRPLELELVDRPLSTSDALRFHLGFRTSSPIKQGILRRIRSSHCE

Spg037762 (gene) of Sponge gourd (cylindrica) v1 genome