; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037763 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037763
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionUnknown protein
Genome locationscaffold27:164051..176095
RNA-Seq ExpressionSpg037763
SyntenySpg037763
Gene Ontology termsGO:0019684 - photosynthesis, light reaction (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009523 - photosystem II (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAN70459.1 hypothetical protein VITISV_033464 [Vitis vinifera]9.3e-1160Show/hide
Query:  SMSKRILVPKQSNYQFSSIVDDPSTDVESVLEK-----------------------------SSSPVKGDKALVGRIPFH
        S+SK ILVPKQSNYQFSSIVDDPSTDVESVLEK                             SSSPVKGDKALVGR PFH
Subjt:  SMSKRILVPKQSNYQFSSIVDDPSTDVESVLEK-----------------------------SSSPVKGDKALVGRIPFH
KAG8362767.1 hypothetical protein BUALT_BualtUnG0041600 [Buddleja alternifolia]3.9e-0955.84Show/hide
Query:  SCIQVVIKETRKNKNPTRELKLPKTTYDRGKLKKGLGSEELPEQGVLTALIAGKSLRLPPEFPQGQAKPTQELHQQT
        S I ++    RK        + P   +   KLKKGLGSEELPEQGVLTALIAGKSLRLPPEFPQG      +LH  T
Subjt:  SCIQVVIKETRKNKNPTRELKLPKTTYDRGKLKKGLGSEELPEQGVLTALIAGKSLRLPPEFPQGQAKPTQELHQQT
QRW36630.1 photosystem II protein M [Cenchrus flaccidus]1.0e-0466.67Show/hide
Query:  IQAKDFASLWDEIPSYCELKKNETMFILNLVAFIATALFILVPTA
        +Q   F+SLWD IPSYCE KKN+ +  +N++AFIATALFILVPTA
Subjt:  IQAKDFASLWDEIPSYCELKKNETMFILNLVAFIATALFILVPTA
QRW36721.1 photosystem II protein M [Stellaria dichotoma var. lanceolata]1.0e-0466.67Show/hide
Query:  IQAKDFASLWDEIPSYCELKKNETMFILNLVAFIATALFILVPTA
        +Q    +SLWD+IPSYCEL KNE +  +N++AFIATALFILVPTA
Subjt:  IQAKDFASLWDEIPSYCELKKNETMFILNLVAFIATALFILVPTA
TrEMBL top hitse value%identityAlignment
A5BRD7 Uncharacterized protein4.5e-1160Show/hide
Query:  SMSKRILVPKQSNYQFSSIVDDPSTDVESVLEK-----------------------------SSSPVKGDKALVGRIPFH
        S+SK ILVPKQSNYQFSSIVDDPSTDVESVLEK                             SSSPVKGDKALVGR PFH
Subjt:  SMSKRILVPKQSNYQFSSIVDDPSTDVESVLEK-----------------------------SSSPVKGDKALVGRIPFH
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTCTCTGCGTTGGGCTCGCTTCTTCAAGCGGAGCTTGCTGCTTTTCATTTTGATAGGATGGAAGATCGGAAAAGACTTCTCTTCATCACGAGACTGATCGGATC
TGCCGTAGACACCCGAGAGACCTCCACAAGGCAGACTCAAAGACCTGGTAAGACAAATCTGTTTACTTCTTTCTCGTTCTTCTTCCCAACCATATTTCCAAGTGATCTCC
GGCAATTGATCGAGCTCTCTGCTGTGCTCTTCAACAATTCTGTGTATAAGGAGTATAACAAGCAATCAAAGGAATGCAGGCGTTGTATCCCATTCCTGTATGCCATTCCC
GCATTCACTCGAGACGTCCAACAAGTTCTCTCTCCCATTGGTAGGCAGAAGACAGGGGTTTTGGAGGGGAAAGGTGCAAAATCTATAATAAATAGAAGTGGAATCCGCTT
CTCGTATTGGAATTTTGGAAAACATTGGCTCAATCCGTCCACATTCATCTCTGTCTTTTTTAAAAAATGGATGTTTTCTTCCGGTCTCTGGTCTCCGGTCTTTCCATCCG
TCTACGGCTATTTTCTTGTTCATCCTGCCTTCGCCCTTTTGTTAGCTGCTCTTCGATCAACCCAGGTCTGGTCTGAATTGGTCGGGAAACTCGAAACTCTCCCGCAAGCG
TCCTTCTTAGGTCGGCATTTGGCTTTGGCCTTGCTTGTTCGGTTTTGGCTCATTCTTTTGATTGCCATGTCTGCTCCGTCTGCTGGCGTGAATGGGAGAATACGATACCA
TAAGGAGGAATTCCTCGTTCTTCATGACTACCCGAAGGAGGAGGTATATGGCAATAGCCAAGTTGACGATAAAAGAATAGGACAAAGGTCTATATTCAAGTCAGAAATCC
AGGCGAAAGATTTTGCATCTCTATGGGATGAAATCCCGAGTTATTGCGAATTAAAGAAAAATGAAACGATGTTTATTCTCAATCTTGTCGCATTTATTGCTACAGCACTG
TTCATTCTAGTTCCTACTGCTTCTCAATTCTATTTCATATGTAGTGAGTTTGAATTGACCCGGTTAGCTAGAAGTTTTAAAGTCAAGCGAGAAAGCAAGTGGATCAGACA
AAGTCTTTCTGGTTGTCTCACCAAAGAGTACTGCGTGGCGTGTGTCGCTTATGCGCGCCTATGGCGGGTGTTGAGATCGACACGAATCCTTACCGCATCCGATATCCCTA
GCAAGGCTCGAGAGACCTCGATGTCTAAGCGGATTCTTGTTCCTAAACAGAGCAACTATCAGTTTAGTAGCATTGTGGACGACCCGTCGACAGACGTCGAGAGTGTTTTG
GAGAAGTCTTCATCTCCGGTGAAAGGTGATAAGGCCCTAGTGGGCCGGATTCCCTTCCATTTGGAAGATGTTTGCAATCGCTTTATGGGATCGCGCGGTTCTTTATCCTA
CCCGAGCGAAAGCGGAGTCTCCAGAGATCAATCAACCGGGCGCCTCCAAAGCTGTATCCAAGTTGTAATAAAAGAAACAAGAAAGAATAAGAATCCAACTAGAGAACTGA
AGCTTCCCAAGACCACTTACGATAGGGGCAAGTTGAAGAAGGGTTTGGGTTCCGAGGAGCTACCAGAGCAGGGGGTTTTAACTGCCCTGATAGCCGGGAAGAGCCTTAGA
CTTCCGCCGGAGTTCCCGCAGGGACAGGCCAAACCAACCCAGGAACTTCACCAGCAAACTCCACACGTCGACCCAGGAGGTGAGGTCTCCCAACGCTGCCGATTGGATGC
CCTGAGTCATTTGGTTTTTACGCGTGTCTGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTCTCTGCGTTGGGCTCGCTTCTTCAAGCGGAGCTTGCTGCTTTTCATTTTGATAGGATGGAAGATCGGAAAAGACTTCTCTTCATCACGAGACTGATCGGATC
TGCCGTAGACACCCGAGAGACCTCCACAAGGCAGACTCAAAGACCTGGTAAGACAAATCTGTTTACTTCTTTCTCGTTCTTCTTCCCAACCATATTTCCAAGTGATCTCC
GGCAATTGATCGAGCTCTCTGCTGTGCTCTTCAACAATTCTGTGTATAAGGAGTATAACAAGCAATCAAAGGAATGCAGGCGTTGTATCCCATTCCTGTATGCCATTCCC
GCATTCACTCGAGACGTCCAACAAGTTCTCTCTCCCATTGGTAGGCAGAAGACAGGGGTTTTGGAGGGGAAAGGTGCAAAATCTATAATAAATAGAAGTGGAATCCGCTT
CTCGTATTGGAATTTTGGAAAACATTGGCTCAATCCGTCCACATTCATCTCTGTCTTTTTTAAAAAATGGATGTTTTCTTCCGGTCTCTGGTCTCCGGTCTTTCCATCCG
TCTACGGCTATTTTCTTGTTCATCCTGCCTTCGCCCTTTTGTTAGCTGCTCTTCGATCAACCCAGGTCTGGTCTGAATTGGTCGGGAAACTCGAAACTCTCCCGCAAGCG
TCCTTCTTAGGTCGGCATTTGGCTTTGGCCTTGCTTGTTCGGTTTTGGCTCATTCTTTTGATTGCCATGTCTGCTCCGTCTGCTGGCGTGAATGGGAGAATACGATACCA
TAAGGAGGAATTCCTCGTTCTTCATGACTACCCGAAGGAGGAGGTATATGGCAATAGCCAAGTTGACGATAAAAGAATAGGACAAAGGTCTATATTCAAGTCAGAAATCC
AGGCGAAAGATTTTGCATCTCTATGGGATGAAATCCCGAGTTATTGCGAATTAAAGAAAAATGAAACGATGTTTATTCTCAATCTTGTCGCATTTATTGCTACAGCACTG
TTCATTCTAGTTCCTACTGCTTCTCAATTCTATTTCATATGTAGTGAGTTTGAATTGACCCGGTTAGCTAGAAGTTTTAAAGTCAAGCGAGAAAGCAAGTGGATCAGACA
AAGTCTTTCTGGTTGTCTCACCAAAGAGTACTGCGTGGCGTGTGTCGCTTATGCGCGCCTATGGCGGGTGTTGAGATCGACACGAATCCTTACCGCATCCGATATCCCTA
GCAAGGCTCGAGAGACCTCGATGTCTAAGCGGATTCTTGTTCCTAAACAGAGCAACTATCAGTTTAGTAGCATTGTGGACGACCCGTCGACAGACGTCGAGAGTGTTTTG
GAGAAGTCTTCATCTCCGGTGAAAGGTGATAAGGCCCTAGTGGGCCGGATTCCCTTCCATTTGGAAGATGTTTGCAATCGCTTTATGGGATCGCGCGGTTCTTTATCCTA
CCCGAGCGAAAGCGGAGTCTCCAGAGATCAATCAACCGGGCGCCTCCAAAGCTGTATCCAAGTTGTAATAAAAGAAACAAGAAAGAATAAGAATCCAACTAGAGAACTGA
AGCTTCCCAAGACCACTTACGATAGGGGCAAGTTGAAGAAGGGTTTGGGTTCCGAGGAGCTACCAGAGCAGGGGGTTTTAACTGCCCTGATAGCCGGGAAGAGCCTTAGA
CTTCCGCCGGAGTTCCCGCAGGGACAGGCCAAACCAACCCAGGAACTTCACCAGCAAACTCCACACGTCGACCCAGGAGGTGAGGTCTCCCAACGCTGCCGATTGGATGC
CCTGAGTCATTTGGTTTTTACGCGTGTCTGTTAG
Protein sequenceShow/hide protein sequence
MAFSALGSLLQAELAAFHFDRMEDRKRLLFITRLIGSAVDTRETSTRQTQRPGKTNLFTSFSFFFPTIFPSDLRQLIELSAVLFNNSVYKEYNKQSKECRRCIPFLYAIP
AFTRDVQQVLSPIGRQKTGVLEGKGAKSIINRSGIRFSYWNFGKHWLNPSTFISVFFKKWMFSSGLWSPVFPSVYGYFLVHPAFALLLAALRSTQVWSELVGKLETLPQA
SFLGRHLALALLVRFWLILLIAMSAPSAGVNGRIRYHKEEFLVLHDYPKEEVYGNSQVDDKRIGQRSIFKSEIQAKDFASLWDEIPSYCELKKNETMFILNLVAFIATAL
FILVPTASQFYFICSEFELTRLARSFKVKRESKWIRQSLSGCLTKEYCVACVAYARLWRVLRSTRILTASDIPSKARETSMSKRILVPKQSNYQFSSIVDDPSTDVESVL
EKSSSPVKGDKALVGRIPFHLEDVCNRFMGSRGSLSYPSESGVSRDQSTGRLQSCIQVVIKETRKNKNPTRELKLPKTTYDRGKLKKGLGSEELPEQGVLTALIAGKSLR
LPPEFPQGQAKPTQELHQQTPHVDPGGEVSQRCRLDALSHLVFTRVC