CuGenDBv2

Gene ID	Spg037768
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic
Genome location	scaffold27:117624..119648
RNA-Seq Expression	Spg037768
Synteny	Spg037768
Gene Ontology terms	GO:0019684 - photosynthesis, light reaction (biological process) GO:0005886 - plasma membrane (cellular component) GO:0009535 - chloroplast thylakoid membrane (cellular component) GO:0016021 - integral component of membrane (cellular component) GO:0016655 - oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor (molecular function) GO:0048038 - quinone binding (molecular function)
InterPro domains	IPR001694 - NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H

Homology

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GenBank top hits

e value

%identity

Alignment

QKQ12429.1 NADH dehydrogenase subunit 1 [Rheum pumilum]

6.9e-17

77.27

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGP
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN LPSRG +S+ S     VGP
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGP

YP_009162932.1 NADH dehydrogenase subunit 1 [Rheum palmatum]

6.9e-17

77.27

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGP
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN LPSRG +S+ S     VGP
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGP

YP_009570750.1 NADH-plastoquinone oxidoreductase subunit 1 [Frankenia pulverulenta]

5.3e-17

84.48

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK LLKEN LPSRG  S+ S
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES

YP_009739664.1 NADH dehydrogenase subunit 1 [Rheum nobile]

6.9e-17

77.27

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGP
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN LPSRG +S+ S     VGP
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGP

YP_009870090.1 NADH-plastoquinone oxidoreductase subunit 1 [Bonnetia paniculata]

5.3e-17

84.48

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES
        +SVLVIVWLERE+SAGIQQRIGPEYAGPLGVLQALADGTK LLKEN LPSRG   + S
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES

TrEMBL top hits

e value

%identity

Alignment

A0A411JRK4 NADH-quinone oxidoreductase subunit H

2.6e-17

84.48

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK LLKEN LPSRG  S+ S
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES

A0A6M8TXZ9 NADH-quinone oxidoreductase subunit H

2.6e-17

84.48

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES
        +SVLVIVWLERE+SAGIQQRIGPEYAGPLGVLQALADGTK LLKEN LPSRG   + S
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES

A0A6N0GQL8 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

3.3e-17

77.27

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGP
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN LPSRG +S+ S     VGP
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGP

A0A6N0GQT6 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

3.3e-17

77.27

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGP
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN LPSRG +S+ S     VGP
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGP

A0A7H0TV88 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

3.3e-17

77.27

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGP
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN LPSRG +S+ S     VGP
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGP

SwissProt top hits

e value

%identity

Alignment

A0A390 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

1.0e-18

88.46

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRG
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN LPSRG
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRG

Q06FP9 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

5.9e-19

81.03

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES
        + VLVIVWLEREISAGIQQRIGPEYAGP G+LQALADGTK LLKEN LPSRG   + S
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES

Q09MC1 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

5.9e-19

81.03

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES
        + VLVIVWLEREISAGIQQRIGPEYA PLG+LQALADGTK L KEN LPSRG  S+ S
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES

Q2L952 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

5.9e-19

81.03

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES
        + VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN LPSRG   + S
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES

Q2QD36 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic

7.7e-19

90.38

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRG
        + VLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTK L KEN LPSRG
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRG

Arabidopsis top hits

e value

%identity

Alignment

ATCG01100.1 NADH dehydrogenase family protein

4.6e-19

82.14

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Query:  VLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES
        VLVIVWLEREISAGIQQRIGPEYAGPLG+LQALADGTK L KEN  PSRG   + S
Subjt:  VLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIES

ATMG00516.1 NADH dehydrogenase 1C

1.3e-05

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPS
        + V  +V  ER++ A +Q+R GP+  G  G+LQ LADG+K +LKE   PS
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPS

ATMG01120.1 NADH dehydrogenase 1B

1.3e-05

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPS
        + V  +V  ER++ A +Q+R GP+  G  G+LQ LADG+K +LKE   PS
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPS

ATMG01275.1 NADH dehydrogenase 1A

1.3e-05

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Query:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPS
        + V  +V  ER++ A +Q+R GP+  G  G+LQ LADG+K +LKE   PS
Subjt:  VSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPS

Sequences

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CDS sequence

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ATGCTTCTTTGTAAGCTTTCTCGTAGTTCATATCAGACTTGGAAGCGGGTGAGTCTAATGCACCCGAAGCCTGAAGTTAGCGTACTAGTAATTGTATGGTTAGAAAGAGA
AATATCCGCAGGGATACAACAACGGATTGGACCTGAATATGCGGGTCCTTTGGGGGTTCTTCAAGCTTTAGCAGATGGTACAAAACCACTTTTGAAAGAAAATCCGCTTC
CATCTAGAGGGGGGCAGTCAATAGAGAGTCAGCAAAATGCACGGGTAGGCCCTTTTGACCCTTTAGGAGGAAAGGGAGTTAGCTGGTACGGGCGGACCCAGAAAGAAGAG
AGGAGGGTTCACCACCAGAAAGGATCGGAAAAGAGAAAAAGAGTCTGA

mRNA sequence

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Protein sequence

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MLLCKLSRSSYQTWKRVSLMHPKPEVSVLVIVWLEREISAGIQQRIGPEYAGPLGVLQALADGTKPLLKENPLPSRGGQSIESQQNARVGPFDPLGGKGVSWYGRTQKEE
RRVHHQKGSEKRKRV

Spg037768 (gene) of Sponge gourd (cylindrica) v1 genome