; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg037896 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037896
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Description60S ribosomal protein L37a
Genome locationscaffold12:40013098..40015418
RNA-Seq ExpressionSpg037896
SyntenySpg037896
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0080188 - RNA-directed DNA methylation (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0022626 - cytosolic ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0005524 - ATP binding (molecular function)
InterPro domainsIPR002674 - Ribosomal protein L37ae
IPR011331 - Ribosomal protein L37ae/L37e
IPR011332 - Zinc-binding ribosomal protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF1873427.1 hypothetical protein Lal_00027465, partial [Lupinus albus]4.2e-4378.74Show/hide
Query:  DLVSAKQQCYV-----------CFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKAS-SFPYFTQYAVKRKAVGIWGCKDCGKVK
        DLVSA   C++            FL KTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK   SF    +YAVKRKAVGIWGCKDCGKVK
Subjt:  DLVSAKQQCYV-----------CFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKAS-SFPYFTQYAVKRKAVGIWGCKDCGKVK

Query:  AGGAYTLNTASAVTVRSTIRRLREQTE
        AGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  AGGAYTLNTASAVTVRSTIRRLREQTE
KAG6571778.1 SNF2 domain-containing protein CLASSY 3, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4577.21Show/hide
Query:  FYSRVSQIQVLHTFTKSSSGDLVSAKQQCYVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWG
        F    S +QVL TFTKSS GD+V  + +        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         YAVKRKAVGIWG
Subjt:  FYSRVSQIQVLHTFTKSSSGDLVSAKQQCYVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWG

Query:  CKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        CKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  CKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
KDO85434.1 hypothetical protein CISIN_1g045338mg [Citrus sinensis]1.6e-4277.34Show/hide
Query:  FTKSSSGDLVSAKQQC-----YVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVK
        F+ ++   L S +QQ       VCF   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         YAVKRKAVGIWGCKDCGKVK
Subjt:  FTKSSSGDLVSAKQQC-----YVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVK

Query:  AGGAYTLNTASAVTVRSTIRRLREQTES
        AGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  AGGAYTLNTASAVTVRSTIRRLREQTES
OVA06874.1 Ribosomal protein L37ae [Macleaya cordata]3.6e-4292.93Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKAS F +   YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
XP_006464390.2 60S ribosomal protein L37a [Citrus sinensis]1.6e-4277.34Show/hide
Query:  FTKSSSGDLVSAKQQC-----YVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVK
        F+ ++   L S +QQ       VCF   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         YAVKRKAVGIWGCKDCGKVK
Subjt:  FTKSSSGDLVSAKQQC-----YVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVK

Query:  AGGAYTLNTASAVTVRSTIRRLREQTES
        AGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  AGGAYTLNTASAVTVRSTIRRLREQTES
TrEMBL top hitse value%identityAlignment
A0A067H0Q3 Uncharacterized protein7.8e-4377.34Show/hide
Query:  FTKSSSGDLVSAKQQC-----YVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVK
        F+ ++   L S +QQ       VCF   TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         YAVKRKAVGIWGCKDCGKVK
Subjt:  FTKSSSGDLVSAKQQC-----YVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVK

Query:  AGGAYTLNTASAVTVRSTIRRLREQTES
        AGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  AGGAYTLNTASAVTVRSTIRRLREQTES
A0A200Q8W6 Ribosomal protein L37ae1.7e-4292.93Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGKAS F +   YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
A0A2H5PZX9 Uncharacterized protein2.9e-4288.57Show/hide
Query:  CFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLR
        C +L+TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLR
Subjt:  CFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLR

Query:  EQTES
        EQTES
Subjt:  EQTES
A0A6A5MJL7 Uncharacterized protein (Fragment)2.0e-4378.74Show/hide
Query:  DLVSAKQQCYV-----------CFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKAS-SFPYFTQYAVKRKAVGIWGCKDCGKVK
        DLVSA   C++            FL KTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK   SF    +YAVKRKAVGIWGCKDCGKVK
Subjt:  DLVSAKQQCYV-----------CFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKAS-SFPYFTQYAVKRKAVGIWGCKDCGKVK

Query:  AGGAYTLNTASAVTVRSTIRRLREQTE
        AGGAYTLNTASAVTVRSTIRRLREQTE
Subjt:  AGGAYTLNTASAVTVRSTIRRLREQTE
V4U3T0 Uncharacterized protein2.9e-4288.57Show/hide
Query:  CFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLR
        C +L+TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         YAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLR
Subjt:  CFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLR

Query:  EQTES
        EQTES
Subjt:  EQTES
SwissProt top hitse value%identityAlignment
P0DKK1 60S ribosomal protein L37a-12.2e-4288Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
P0DKK2 60S ribosomal protein L37a-22.2e-4288Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         +AVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Q9SRK6 Putative 60S ribosomal protein L37a-14.1e-4186Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK         Y+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Q9XHE4 60S ribosomal protein L37a1.7e-4290Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK         YAVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Q9ZRS8 60S ribosomal protein L37a1.8e-4187.88Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGK         +AVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
Arabidopsis top hitse value%identityAlignment
AT3G10950.1 Zinc-binding ribosomal protein family protein2.9e-4286Show/hide
Query:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        TKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK         Y+VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  TKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
AT3G60245.1 Zinc-binding ribosomal protein family protein1.9e-4185.71Show/hide
Query:  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGK         Y VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Subjt:  KRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYFTQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CCGGATCAAGGCGACCCGCTTTGTTCGACCCGTTTTAACCGGGCCTCTGGCCTTATTATTGTAAAGGAAAATTTCTATTCTAGGGTTTCTCAGATTCAAGTTCTTCACAC
TTTCACCAAATCTTCTTCCGGAGATCTTGTGTCAGCCAAGCAGCAATGTTATGTTTGTTTTTTATTGAAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATG
GTACCCGATACGGTGCCAGTCTGAGAAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGTAAATACTTCTGTGAGTTCTGTGGAAAGGCAAGTAGTTTTCCTTATTTT
ACCCAATATGCAGTGAAGAGGAAGGCAGTCGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGT
GAGAAGCACTATCAGGAGGCTGAGAGAACAGACTGAAAGTTAA
mRNA sequenceShow/hide mRNA sequence
CCGGATCAAGGCGACCCGCTTTGTTCGACCCGTTTTAACCGGGCCTCTGGCCTTATTATTGTAAAGGAAAATTTCTATTCTAGGGTTTCTCAGATTCAAGTTCTTCACAC
TTTCACCAAATCTTCTTCCGGAGATCTTGTGTCAGCCAAGCAGCAATGTTATGTTTGTTTTTTATTGAAGACAAAGAGAACCAAGAAGGCAGGCATTGTTGGAAAATATG
GTACCCGATACGGTGCCAGTCTGAGAAAGCAGATTAAGAAGATGGAAGTCAGTCAGCACAGTAAATACTTCTGTGAGTTCTGTGGAAAGGCAAGTAGTTTTCCTTATTTT
ACCCAATATGCAGTGAAGAGGAAGGCAGTCGGAATTTGGGGCTGCAAAGATTGTGGTAAAGTGAAAGCCGGCGGTGCCTACACTCTCAACACTGCTAGTGCTGTGACAGT
GAGAAGCACTATCAGGAGGCTGAGAGAACAGACTGAAAGTTAA
Protein sequenceShow/hide protein sequence
PDQGDPLCSTRFNRASGLIIVKENFYSRVSQIQVLHTFTKSSSGDLVSAKQQCYVCFLLKTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKASSFPYF
TQYAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES