CuGenDBv2

Gene ID	Spg037903
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	protein LOW PSII ACCUMULATION 1, chloroplastic
Genome location	scaffold12:41999744..42004288
RNA-Seq Expression	Spg037903
Synteny	Spg037903
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR021883 - Protein LOW PSII ACCUMULATION 1-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022131239.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Momordica charantia]

9.1e-165

88.39

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMANISS NN G PP  P   SHNAHNF+F+R  CC VH KT  F  GP LAESLR LQ  RRNLANFTCSAA+KPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE VPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVIP+ +LRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPESFIMEAF+SSEPFTE+LLERGV+VVPFATD SSLNFEFDERE++KD+TTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVS++SPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_022963501.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita moschata]

2.7e-164

88.1

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMA I SCNN GRPP      SHNA N +F RR CCHVHR   SF  GP +A+SLR LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE+VPDIL GLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI ISTLRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPESFIMEAFK+SEPFTERLLERGVLV+PFATDASSLNFEFDEREE+KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_022967293.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita maxima]

4.5e-164

87.8

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Query:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMA I SCNN GRPP      SHNAHN +F RR CCHVHR   SF  GP +A+SLR LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE+VPDIL GLGIDFGAVA FAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI ISTLRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPES IMEAFK+SEPFTERLLERGVLV+PFATDASSLNFEFDEREE+KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_023554665.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Cucurbita pepo subsp. pepo]

7.7e-164

87.8

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMA I SCNN GRPP      SHNA N +F RR CCHVHR   SF  GP +A+SLR LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE+VPDIL GLGIDFGAVA FAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI ISTLRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPESFIMEAFK+SEPFTERLLERGVLV+PFATDASSLNFEFDEREE+KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

XP_038888898.1 protein LOW PSII ACCUMULATION 1, chloroplastic [Benincasa hispida]

8.6e-163

89.52

Show/hide

Query:  LSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFF
        LS  NISSCNNI RPP     H     +F+F RR CCHVHRKT SF   P L +SL SL + RRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFF
Subjt:  LSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFF

Query:  YLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVIC
        YLTFIASGTLGGLIATTQLLAALAN SRAE+VPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVIC
Subjt:  YLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVIC

Query:  AGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRG
        AGPESFIMEAFKSSEPFTERLLERGVLVVP ATD S+LNFEFDEREEVKD+TTKRKRLWRLTPVYM EWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRG
Subjt:  AGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRG

Query:  SGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        SGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  SGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L902 Uncharacterized protein

1.7e-156

86.67

Show/hide

Query:  NISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTF
        +ISS NNI  PP      SHNA +F+F RR  C VHRKT SF   PRL  SLR L + RRNLANF CSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTF
Subjt:  NISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTF

Query:  IASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPE
        IASGTLGGLIATTQLL ALAN SRA++VPDIL+GLG+DFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPIS LRGIARLVICAGPE
Subjt:  IASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPE

Query:  SFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVG
        SFI+EAFKSSEPFTERLLERGVLVVP ATD ++LNFEFD+REEVKD+TTKRKRLWRLTPVYM EWSAWLDEQKKLAGV+SDSPVYLSLRMDGRVRGSGVG
Subjt:  SFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVG

Query:  YPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        YPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  YPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A5D3BG35 Protein LOW PSII ACCUMULATION 1

1.1e-155

85.63

Show/hide

Query:  LSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFF
        LS   +SS NNI  PP      SHNA +F+F RR C HVHRKT SF   PRL  SLR   + RRNLAN+  SAADKPEISSTAKIRSEVLSPFRSVRMFF
Subjt:  LSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFF

Query:  YLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVIC
        YLTFIASGTLGGLIATTQLL ALAN SRA++VPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVIC
Subjt:  YLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVIC

Query:  AGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRG
        AGPESF++EAFKSSEPFTE+LLERGVLVVP ATD ++LNFEFDEREEVKD+T+KRK+LWRLTPVYM EWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRG
Subjt:  AGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRG

Query:  SGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        SGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  SGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A6J1BP58 protein LOW PSII ACCUMULATION 1, chloroplastic

4.4e-165

88.39

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMANISS NN G PP  P   SHNAHNF+F+R  CC VH KT  F  GP LAESLR LQ  RRNLANFTCSAA+KPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE VPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ+KVIP+ +LRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPESFIMEAF+SSEPFTE+LLERGV+VVPFATD SSLNFEFDERE++KD+TTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVS++SPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A6J1HGA1 protein LOW PSII ACCUMULATION 1, chloroplastic

1.3e-164

88.1

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMA I SCNN GRPP      SHNA N +F RR CCHVHR   SF  GP +A+SLR LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE+VPDIL GLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI ISTLRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPESFIMEAFK+SEPFTERLLERGVLV+PFATDASSLNFEFDEREE+KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

A0A6J1HWD0 protein LOW PSII ACCUMULATION 1, chloroplastic

2.2e-164

87.8

Show/hide

Query:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM
        MV+SMA I SCNN GRPP      SHNAHN +F RR CCHVHR   SF  GP +A+SLR LQ+ RRNLA+ TCSA+DKPEISSTAKIRSEVLSPFRSVRM
Subjt:  MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRM

Query:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV
        FFYLTFIASGTLGGLIATTQLLAALAN SRAE+VPDIL GLGIDFGAVA FAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVI ISTLRGIARLV
Subjt:  FFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLV

Query:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV
        ICAGPES IMEAFK+SEPFTERLLERGVLV+PFATDASSLNFEFDEREE+KD+TTKRKRLWRLTPVYM +WSAWLD+QKKLAGVSSDSPVYLSLRMDGRV
Subjt:  ICAGPESFIMEAFKSSEPFTERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRV

Query:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
        RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL
Subjt:  RGSGVGYPPWNALVAQLPPVKGLWSGLLDGMDGRVL

SwissProt top hits

e value

%identity

Alignment

Q9SRY4 Protein LOW PSII ACCUMULATION 1, chloroplastic

8.1e-31

31.32

Show/hide

Query:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQN
        K+ SEV +PFR VR FFY  F A+  +       +L+ A+     A ++ +      I+ G + +   L+  EN  +  Q+ +++R+E+LS L LR+  N
Subjt:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQN

Query:  KVIPISTLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVVPF---------------------ATDASSLNFEFDEREE--VKDLTTKRKRLWR
        +V+ +  LR   R VI AG +  +  A + ++ F   LL RGVL+VP                      AT   S+  +FD R +  V     K +  ++
Subjt:  KVIPISTLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVVPF---------------------ATDASSLNFEFDEREE--VKDLTTKRKRLWR

Query:  LTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL
           V   EW  W+ +Q+   GV+    VY+ LR+DGRVR SG G P W  +  +LPP+  + S L
Subjt:  LTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL

Arabidopsis top hits

e value

%identity

Alignment

AT1G02910.1 tetratricopeptide repeat (TPR)-containing protein

5.7e-32

31.32

Show/hide

Query:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQN
        K+ SEV +PFR VR FFY  F A+  +       +L+ A+     A ++ +      I+ G + +   L+  EN  +  Q+ +++R+E+LS L LR+  N
Subjt:  KIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQN

Query:  KVIPISTLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVVPF---------------------ATDASSLNFEFDEREE--VKDLTTKRKRLWR
        +V+ +  LR   R VI AG +  +  A + ++ F   LL RGVL+VP                      AT   S+  +FD R +  V     K +  ++
Subjt:  KVIPISTLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVLVVPF---------------------ATDASSLNFEFDEREE--VKDLTTKRKRLWR

Query:  LTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL
           V   EW  W+ +Q+   GV+    VY+ LR+DGRVR SG G P W  +  +LPP+  + S L
Subjt:  LTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGL

AT4G28740.1 FUNCTIONS IN: molecular_function unknown

9.6e-104

63.19

Show/hide

Query:  RRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLA---NFTCSAADKP-EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANPSR
        RR   H HR+   F      +     L  TR+      N  C AAD+P EIS+ A+IRSEVLSPFRSVRMFFYL FIASG+LGGLIAT++L+ ALANP+R
Subjt:  RRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLA---NFTCSAADKP-EISSTAKIRSEVLSPFRSVRMFFYLTFIASGTLGGLIATTQLLAALANPSR

Query:  AEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ-NKVIPISTLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVL
        + +V +I+KGLG+D GA +LFAFLYF EN  KNAQ+ARLSREE+L  LK+RV++ NKVI +  LRG+ARLVICAGP  FI EAFK S+ +T+ L+ERGV+
Subjt:  AEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQ-NKVIPISTLRGIARLVICAGPESFIMEAFKSSEPFTERLLERGVL

Query:  VVPFATDASSLNFEFDEREEV-KDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLL
        VV +ATD +S   EFDE +   ++++ +RK+LWR+TPV++PEW  WL+EQKKLA VSSDSPVYLSLR+DGRVR SGVGYPPW A VAQLPPVKG+W+GLL
Subjt:  VVPFATDASSLNFEFDEREEV-KDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLL

Query:  DGMDGRV
        DGMDGRV
Subjt:  DGMDGRV

Sequences

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CDS sequence

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ATGGTGCTTTCCATGGCGAACATTTCCTCCTGCAACAACATTGGTCGACCTCCACAAATTCCTTCTTTTCACAGCCACAACGCTCACAATTTCGAATTCTTTCGCCGTTT
CTGCTGCCATGTTCATCGGAAGACAGCCTCGTTTCCTCTTGGCCCTAGGCTAGCGGAGTCGCTTCGTTCTCTTCAGCACACGAGACGGAATTTAGCTAACTTCACTTGCT
CCGCTGCTGATAAACCGGAAATCAGTTCCACAGCCAAGATAAGAAGTGAAGTCCTCTCTCCTTTTCGGTCGGTTCGGATGTTCTTTTATCTCACTTTCATTGCCAGTGGT
ACATTGGGAGGACTGATAGCAACCACTCAATTGCTTGCTGCATTGGCAAATCCATCAAGAGCTGAAGATGTCCCTGATATTCTAAAAGGACTTGGAATAGACTTCGGAGC
TGTAGCTCTTTTTGCATTTCTTTATTTCAGGGAGAACAATGCAAAAAATGCTCAATTAGCAAGACTATCGAGAGAAGAAAGCCTTTCCAATCTAAAGCTTCGAGTGGACC
AAAACAAAGTTATTCCTATTAGCACTCTCCGTGGGATTGCTCGTCTGGTTATTTGTGCTGGCCCTGAATCCTTTATCATGGAAGCTTTTAAATCAAGTGAACCTTTCACT
GAACGACTTCTCGAACGGGGCGTGTTAGTCGTACCCTTTGCCACGGATGCTAGTTCACTGAATTTTGAGTTTGATGAACGTGAAGAGGTGAAGGATCTAACCACCAAAAG
AAAAAGACTGTGGCGGTTGACTCCAGTTTACATGCCTGAGTGGTCGGCTTGGTTAGATGAACAAAAGAAGTTGGCTGGAGTCTCCTCTGATTCTCCTGTGTATCTATCTC
TGCGAATGGATGGCCGTGTTCGTGGTAGCGGCGTTGGCTATCCTCCATGGAATGCTCTTGTTGCACAATTACCACCTGTTAAAGGACTATGGTCAGGTCTTCTAGATGGA
ATGGATGGGAGAGTTCTTTGA

mRNA sequence

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Protein sequence

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MVLSMANISSCNNIGRPPQIPSFHSHNAHNFEFFRRFCCHVHRKTASFPLGPRLAESLRSLQHTRRNLANFTCSAADKPEISSTAKIRSEVLSPFRSVRMFFYLTFIASG
TLGGLIATTQLLAALANPSRAEDVPDILKGLGIDFGAVALFAFLYFRENNAKNAQLARLSREESLSNLKLRVDQNKVIPISTLRGIARLVICAGPESFIMEAFKSSEPFT
ERLLERGVLVVPFATDASSLNFEFDEREEVKDLTTKRKRLWRLTPVYMPEWSAWLDEQKKLAGVSSDSPVYLSLRMDGRVRGSGVGYPPWNALVAQLPPVKGLWSGLLDG
MDGRVL

Spg037903 (gene) of Sponge gourd (cylindrica) v1 genome