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Spg037912 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037912
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionER lumen protein-retaining receptor
Genome locationscaffold12:41644756..41646462
RNA-Seq ExpressionSpg037912
SyntenySpg037912
Gene Ontology termsGO:0006621 - protein retention in ER lumen (biological process)
GO:0015031 - protein transport (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0046923 - ER retention sequence binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAB5516145.1 hypothetical protein DKX38_026793 [Salix brachista]9.5e-0652.63Show/hide
Query:  VSSFIHCQLGLPILHRASLRPLDNLDFWARANATLRRFLLLLFPELEEQPKTPVASL
        + S IH +LGL +LHRA+L  LDNLD    ++  + RFLLLLFPELEEQ +  V  +
Subjt:  VSSFIHCQLGLPILHRASLRPLDNLDFWARANATLRRFLLLLFPELEEQPKTPVASL
XP_022967323.1 ER lumen protein-retaining receptor-like isoform X1 [Cucurbita maxima]3.7e-1071.7Show/hide
Query:  LDNLDFWARANATLRRFLLLLFPELEEQPKTPVASLRASMDIYKGEVTSLMKL
        + NLDF A ANATLRR LLLLF ELE+QP+TPVASLR+  DIYKGEVT  + L
Subjt:  LDNLDFWARANATLRRFLLLLFPELEEQPKTPVASLRASMDIYKGEVTSLMKL
TrEMBL top hitse value%identityAlignment
A0A5N5JFN6 Uncharacterized protein4.6e-0652.63Show/hide
Query:  VSSFIHCQLGLPILHRASLRPLDNLDFWARANATLRRFLLLLFPELEEQPKTPVASL
        + S IH +LGL +LHRA+L  LDNLD    ++  + RFLLLLFPELEEQ +  V  +
Subjt:  VSSFIHCQLGLPILHRASLRPLDNLDFWARANATLRRFLLLLFPELEEQPKTPVASL
A0A6J1HUR5 ER lumen protein-retaining receptor1.8e-1071.7Show/hide
Query:  LDNLDFWARANATLRRFLLLLFPELEEQPKTPVASLRASMDIYKGEVTSLMKL
        + NLDF A ANATLRR LLLLF ELE+QP+TPVASLR+  DIYKGEVT  + L
Subjt:  LDNLDFWARANATLRRFLLLLFPELEEQPKTPVASLRASMDIYKGEVTSLMKL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTGCGTATCGAGCTTTATACATTGTCAACTGGGTTTACCGATACTTCACAGAGCCTCACTTCGTCCACTGGATAACTTGGATTTCTGGGCTCGTGCAAACGCTAC
TTTACGCAGATTTCTTCTATTATTATTTCCAGAGTTGGAAGAACAACCAAAAACTCCAGTTGCCAGCTTAAGAGCTTCAATGGATATATATAAAGGAGAAGTCACTTCAC
TTATGAAACTCGGTTGTATTTGTTTTTTAGTTCACAGTTCACCAGAAAATCCTGATCTTTCTGGCTCTGTTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCAGTGCGTATCGAGCTTTATACATTGTCAACTGGGTTTACCGATACTTCACAGAGCCTCACTTCGTCCACTGGATAACTTGGATTTCTGGGCTCGTGCAAACGCTAC
TTTACGCAGATTTCTTCTATTATTATTTCCAGAGTTGGAAGAACAACCAAAAACTCCAGTTGCCAGCTTAAGAGCTTCAATGGATATATATAAAGGAGAAGTCACTTCAC
TTATGAAACTCGGTTGTATTTGTTTTTTAGTTCACAGTTCACCAGAAAATCCTGATCTTTCTGGCTCTGTTTAG
Protein sequenceShow/hide protein sequence
MQCVSSFIHCQLGLPILHRASLRPLDNLDFWARANATLRRFLLLLFPELEEQPKTPVASLRASMDIYKGEVTSLMKLGCICFLVHSSPENPDLSGSV