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Spg037940 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg037940
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionZf-CCHC domain-containing protein/UBN2 domain-containing protein
Genome locationscaffold12:38688836..38696910
RNA-Seq ExpressionSpg037940
SyntenySpg037940
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046182.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]1.1e-1861.05Show/hide
Query:  NDKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSSMP
        N+K AL+DK++F+E DS EK++L+ VLKE EL   ++L+ AKE+IKKLTIGAQ+LDKII++GK   DKR LGY+DE+ T S SKT FVKAS  +P
Subjt:  NDKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSSMP

KAA0051650.1 zf-CCHC domain-containing protein/UBN2 domain-containing protein [Cucumis melo var. makuwa]3.0e-2150Show/hide
Query:  YLCLMAHSNDGTDLECDEDEVTHKSPTYDELYNAFEKNDKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGK
        +L LMAHSN   + E D++ V+ K        +  + N+K AL+DK++F+E D  EK++L+ VLKE EL   ++L+ AKE+IKKLTI AQ+L +II++GK
Subjt:  YLCLMAHSNDGTDLECDEDEVTHKSPTYDELYNAFEKNDKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGK

Query:  PLNDKRGLGYVDENVTPSNSKTIFVKASS-----SMPSDV
           DKRGLGY+DE  TPS+SKT FVKAS      +MP+DV
Subjt:  PLNDKRGLGYVDENVTPSNSKTIFVKASS-----SMPSDV

XP_022156978.1 uncharacterized protein LOC111023806 [Momordica charantia]5.6e-2337.07Show/hide
Query:  IVAEEKDEGTHLLDEETTPLPSWLRVTGKAVLNAGAKARRWASERNYNSQNQEKFHGVEKEKCDASYLCLMAHSNDGTDLECDEDEVTHKSP-TYDELYN
        I  E   EG + LDE+     S  R T   +L +  K+++ A +  ++  ++    G E E  + +  C MAHS    D E ++D+  +  P +YDEL+ 
Subjt:  IVAEEKDEGTHLLDEETTPLPSWLRVTGKAVLNAGAKARRWASERNYNSQNQEKFHGVEKEKCDASYLCLMAHSNDGTDLECDEDEVTHKSP-TYDELYN

Query:  AFEK-----------------------NDKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGY
        AFE                        ++  +L D I  ++ + H+ ++L+ +LK+ E  A  EL+ AK+ IK+LTIGAQ+LDKII+ GKP  DKRGLGY
Subjt:  AFEK-----------------------NDKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGY

Query:  VDENVTPSNSKTIFVKASSSMPSDVLLNVLPK
        ++E  TPS+SKTIFVKAS +MP  V   V  K
Subjt:  VDENVTPSNSKTIFVKASSSMPSDVLLNVLPK

XP_022158792.1 uncharacterized protein LOC111025259 [Momordica charantia]1.9e-1840Show/hide
Query:  LNAGAKARRWASERNYNSQNQEKFHGVEKEKCDASYLCLMAHSNDGTDLECDEDEVTHKSPTYDELYNAFEKNDKLALIDKIKFIECDSHEKNDLLHVLK
        L +  K+++ A +  ++  ++    G E E  + +  C MAHS+   +    +DE+T    +YDEL+ AFE                  + +NDL  ++ 
Subjt:  LNAGAKARRWASERNYNSQNQEKFHGVEKEKCDASYLCLMAHSNDGTDLECDEDEVTHKSPTYDELYNAFEKNDKLALIDKIKFIECDSHEKNDLLHVLK

Query:  EKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSSMPSDVLLNVL
                EL+ AK+SIKKLTIGAQ+LDKII++GKP  DKRGLGY+DE  TPS+SK IFVKAS +MP  V   V+
Subjt:  EKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSSMPSDVLLNVL

XP_031741720.1 uncharacterized protein LOC116403915 [Cucumis sativus]8.0e-2257.27Show/hide
Query:  DKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSSMPSDVLLN
        +K AL+DK++F+E DS EK++L+ VLKE EL   +EL+ AKE+IKKLTIGAQ+LDKII++GK   DKRGLGY+DE+ TPS+SKT FVKAS          
Subjt:  DKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSSMPSDVLLN

Query:  VLPKCDMHKH
        ++PK +M  H
Subjt:  VLPKCDMHKH

TrEMBL top hitse value%identityAlignment
A0A5A7TRZ7 Zf-CCHC domain-containing protein/UBN2 domain-containing protein5.3e-1961.05Show/hide
Query:  NDKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSSMP
        N+K AL+DK++F+E DS EK++L+ VLKE EL   ++L+ AKE+IKKLTIGAQ+LDKII++GK   DKR LGY+DE+ T S SKT FVKAS  +P
Subjt:  NDKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSSMP

A0A5A7U923 Zf-CCHC domain-containing protein/UBN2 domain-containing protein1.5e-2150Show/hide
Query:  YLCLMAHSNDGTDLECDEDEVTHKSPTYDELYNAFEKNDKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGK
        +L LMAHSN   + E D++ V+ K        +  + N+K AL+DK++F+E D  EK++L+ VLKE EL   ++L+ AKE+IKKLTI AQ+L +II++GK
Subjt:  YLCLMAHSNDGTDLECDEDEVTHKSPTYDELYNAFEKNDKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGK

Query:  PLNDKRGLGYVDENVTPSNSKTIFVKASS-----SMPSDV
           DKRGLGY+DE  TPS+SKT FVKAS      +MP+DV
Subjt:  PLNDKRGLGYVDENVTPSNSKTIFVKASS-----SMPSDV

A0A5H2XMX4 Transposable element protein (Fragment)1.4e-0842.05Show/hide
Query:  LIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSS
        L + IK +E +  ++++    L+ + +    EL++ KE I+ LTIGA K+DK+++ GK   DKRGLGY++E+ TPS+ +TIFVK  S+
Subjt:  LIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSS

A0A6J1DS74 uncharacterized protein LOC1110238062.7e-2337.07Show/hide
Query:  IVAEEKDEGTHLLDEETTPLPSWLRVTGKAVLNAGAKARRWASERNYNSQNQEKFHGVEKEKCDASYLCLMAHSNDGTDLECDEDEVTHKSP-TYDELYN
        I  E   EG + LDE+     S  R T   +L +  K+++ A +  ++  ++    G E E  + +  C MAHS    D E ++D+  +  P +YDEL+ 
Subjt:  IVAEEKDEGTHLLDEETTPLPSWLRVTGKAVLNAGAKARRWASERNYNSQNQEKFHGVEKEKCDASYLCLMAHSNDGTDLECDEDEVTHKSP-TYDELYN

Query:  AFEK-----------------------NDKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGY
        AFE                        ++  +L D I  ++ + H+ ++L+ +LK+ E  A  EL+ AK+ IK+LTIGAQ+LDKII+ GKP  DKRGLGY
Subjt:  AFEK-----------------------NDKLALIDKIKFIECDSHEKNDLLHVLKEKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGY

Query:  VDENVTPSNSKTIFVKASSSMPSDVLLNVLPK
        ++E  TPS+SKTIFVKAS +MP  V   V  K
Subjt:  VDENVTPSNSKTIFVKASSSMPSDVLLNVLPK

A0A6J1DY46 uncharacterized protein LOC1110252599.0e-1940Show/hide
Query:  LNAGAKARRWASERNYNSQNQEKFHGVEKEKCDASYLCLMAHSNDGTDLECDEDEVTHKSPTYDELYNAFEKNDKLALIDKIKFIECDSHEKNDLLHVLK
        L +  K+++ A +  ++  ++    G E E  + +  C MAHS+   +    +DE+T    +YDEL+ AFE                  + +NDL  ++ 
Subjt:  LNAGAKARRWASERNYNSQNQEKFHGVEKEKCDASYLCLMAHSNDGTDLECDEDEVTHKSPTYDELYNAFEKNDKLALIDKIKFIECDSHEKNDLLHVLK

Query:  EKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSSMPSDVLLNVL
                EL+ AK+SIKKLTIGAQ+LDKII++GKP  DKRGLGY+DE  TPS+SK IFVKAS +MP  V   V+
Subjt:  EKELLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSSMPSDVLLNVL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCATTAGATTGAACTCATTAACCAACCAAGAAACGATCTCTACGTGCTTACCCACTGCAAGAGACGTCAGAAAAACAGAGGAGACGACCCCCGCACACTGCTGTCC
GCGCGCCCGAACCACACAGTCTCCGAAGCTTGCCAAAAACGACGCTATTCACGCCCACCCACGCTACTACAACACAAAACAGAGAATGGAGGGGCTGGGAGTGAGAGGTC
GGCGAGGGAAAGGGAGGCCTCGCGCGAGAATAACACCAATCGTAGCAGAAGAAAAAGACGAGGGGACTCACCTGCTGGACGAAGAGACGACGCCGCTGCCGTCGTGGTTG
CGCGTCACCGGGAAGGCCGTCCTCAACGCCGGCGCCAAGGCGCGCCGCTGGGCGTCGGAGAGAAATTATAATTCTCAAAATCAAGAAAAATTCCATGGAGTAGAAAAAGA
AAAGTGTGATGCATCATACTTATGCTTGATGGCTCATTCGAACGATGGGACCGATCTCGAATGCGATGAAGATGAGGTAACTCATAAATCTCCAACTTATGATGAATTAT
ATAATGCATTTGAGAAGAATGATAAACTTGCCTTGATTGACAAGATTAAATTCATTGAATGTGATAGTCATGAGAAAAATGATCTTTTGCATGTGCTTAAAGAAAAAGAA
TTGTTAGCTAATAAAGAACTTGAAATTGCAAAAGAGTCCATTAAGAAATTGACTATAGGTGCACAAAAATTAGATAAAATTATTGACATGGGTAAACCGTTAAATGACAA
AAGAGGTCTTGGTTATGTTGATGAGAATGTTACTCCATCAAATTCCAAAACTATTTTTGTTAAAGCATCTTCTAGTATGCCTAGTGACGTTTTGCTGAATGTTTTGCCAA
AATGTGATATGCATAAGCATGATGTACTAAAATTTGTTCACAAGCATGGTGTAGCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCATTAGATTGAACTCATTAACCAACCAAGAAACGATCTCTACGTGCTTACCCACTGCAAGAGACGTCAGAAAAACAGAGGAGACGACCCCCGCACACTGCTGTCC
GCGCGCCCGAACCACACAGTCTCCGAAGCTTGCCAAAAACGACGCTATTCACGCCCACCCACGCTACTACAACACAAAACAGAGAATGGAGGGGCTGGGAGTGAGAGGTC
GGCGAGGGAAAGGGAGGCCTCGCGCGAGAATAACACCAATCGTAGCAGAAGAAAAAGACGAGGGGACTCACCTGCTGGACGAAGAGACGACGCCGCTGCCGTCGTGGTTG
CGCGTCACCGGGAAGGCCGTCCTCAACGCCGGCGCCAAGGCGCGCCGCTGGGCGTCGGAGAGAAATTATAATTCTCAAAATCAAGAAAAATTCCATGGAGTAGAAAAAGA
AAAGTGTGATGCATCATACTTATGCTTGATGGCTCATTCGAACGATGGGACCGATCTCGAATGCGATGAAGATGAGGTAACTCATAAATCTCCAACTTATGATGAATTAT
ATAATGCATTTGAGAAGAATGATAAACTTGCCTTGATTGACAAGATTAAATTCATTGAATGTGATAGTCATGAGAAAAATGATCTTTTGCATGTGCTTAAAGAAAAAGAA
TTGTTAGCTAATAAAGAACTTGAAATTGCAAAAGAGTCCATTAAGAAATTGACTATAGGTGCACAAAAATTAGATAAAATTATTGACATGGGTAAACCGTTAAATGACAA
AAGAGGTCTTGGTTATGTTGATGAGAATGTTACTCCATCAAATTCCAAAACTATTTTTGTTAAAGCATCTTCTAGTATGCCTAGTGACGTTTTGCTGAATGTTTTGCCAA
AATGTGATATGCATAAGCATGATGTACTAAAATTTGTTCACAAGCATGGTGTAGCAAAATGA
Protein sequenceShow/hide protein sequence
MGIRLNSLTNQETISTCLPTARDVRKTEETTPAHCCPRARTTQSPKLAKNDAIHAHPRYYNTKQRMEGLGVRGRRGKGRPRARITPIVAEEKDEGTHLLDEETTPLPSWL
RVTGKAVLNAGAKARRWASERNYNSQNQEKFHGVEKEKCDASYLCLMAHSNDGTDLECDEDEVTHKSPTYDELYNAFEKNDKLALIDKIKFIECDSHEKNDLLHVLKEKE
LLANKELEIAKESIKKLTIGAQKLDKIIDMGKPLNDKRGLGYVDENVTPSNSKTIFVKASSSMPSDVLLNVLPKCDMHKHDVLKFVHKHGVAK