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Spg038022 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038022
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionStructural constituent of ribosome
Genome locationscaffold12:41267034..41269512
RNA-Seq ExpressionSpg038022
SyntenySpg038022
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0005840 - ribosome (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3447845.1 hypothetical protein FNV43_RR08551 [Rhamnella rubrinervis]8.9e-0788.57Show/hide
Query:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        +N   KSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
XP_009595452.1 uncharacterized protein LOC104091755 [Nicotiana tomentosiformis]8.9e-0788.57Show/hide
Query:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        +N   KSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
XP_009777485.1 PREDICTED: uncharacterized protein LOC104227050 [Nicotiana sylvestris]8.9e-0788.57Show/hide
Query:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        +N   KSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
XP_019247843.1 PREDICTED: uncharacterized protein LOC109227227 [Nicotiana attenuata]8.9e-0788.57Show/hide
Query:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        +N   KSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
XP_022156090.1 uncharacterized protein LOC111023059 [Momordica charantia]8.9e-0788.57Show/hide
Query:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        +N   KSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
TrEMBL top hitse value%identityAlignment
A0A1J6IPN6 Uncharacterized protein4.3e-0788.57Show/hide
Query:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        +N   KSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
A0A1S3XNW9 uncharacterized protein LOC1077672574.3e-0788.57Show/hide
Query:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        +N   KSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
A0A1S4D3S3 uncharacterized protein LOC1078256194.3e-0788.57Show/hide
Query:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        +N   KSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
A0A1U7WTD0 uncharacterized protein LOC1042270504.3e-0788.57Show/hide
Query:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        +N   KSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
A0A6J1DPB8 uncharacterized protein LOC1110230594.3e-0788.57Show/hide
Query:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
        +N   KSKKSKRRLRQPATVPLAYAKVMKKLNFCG
Subjt:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFCG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G45590.1 Ribosomal protein L353.8e-0879.41Show/hide
Query:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFC
        +N   KSKKSKRRLRQP  VP AYAKVMKKLNFC
Subjt:  YNVRQKSKKSKRRLRQPATVPLAYAKVMKKLNFC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGTCGGCCGTTGCCGCCTCACCCTCTCCCCTCTCGATTCGAAGTCAACATCACCTGATTCTCCCATGTCCATCGGACACTATCAGTCATTGTCGCCTCACCCTCTC
CCTTCCATCTCTGTTTGACGCCTCTTGCCCTCTCCCTCACCCATCTCCATTCGCCGCTGCCTTTCCCTCTCCCTTCTCCATTCAAAGCCACCGCTACCTCTTACCTATTC
CCTCACCATTCAAGGTCGCATCTAATGTCCATCAAATGGACCCTTATCCTAAAAGTGATTATTGTTACTATAATGTGAGACAAAAGTCCAAGAAATCAAAGCGTAGACTG
AGACAGCCCGCCACTGTCCCATTAGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGTGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGTTGTCGGCCGTTGCCGCCTCACCCTCTCCCCTCTCGATTCGAAGTCAACATCACCTGATTCTCCCATGTCCATCGGACACTATCAGTCATTGTCGCCTCACCCTCTC
CCTTCCATCTCTGTTTGACGCCTCTTGCCCTCTCCCTCACCCATCTCCATTCGCCGCTGCCTTTCCCTCTCCCTTCTCCATTCAAAGCCACCGCTACCTCTTACCTATTC
CCTCACCATTCAAGGTCGCATCTAATGTCCATCAAATGGACCCTTATCCTAAAAGTGATTATTGTTACTATAATGTGAGACAAAAGTCCAAGAAATCAAAGCGTAGACTG
AGACAGCCCGCCACTGTCCCATTAGCTTATGCCAAGGTAATGAAGAAGCTCAACTTTTGTGGTTAA
Protein sequenceShow/hide protein sequence
MLSAVAASPSPLSIRSQHHLILPCPSDTISHCRLTLSLPSLFDASCPLPHPSPFAAAFPSPFSIQSHRYLLPIPSPFKVASNVHQMDPYPKSDYCYYNVRQKSKKSKRRL
RQPATVPLAYAKVMKKLNFCG