CuGenDBv2

Gene ID	Spg038025
Organism	Luffa cylindrica (Sponge gourd (cylindrica) v1)
Description	50S ribosomal protein L35
Genome location	scaffold12:41271050..41274026
RNA-Seq Expression	Spg038025
Synteny	Spg038025
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR037229 - Ribosomal protein L35 superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAG7036224.1 hypothetical protein SDJN02_03026 [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-56

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Query:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS
        MLRWC+KLRSAAA+PSQIVHSVSST RIFHS+PSLYQPLHFSP+NLSSRSL NASL TH SLAAYQCI   LSPL  VQVRHVSSRER+K+RKPMTPVTS
Subjt:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAH K+
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA

XP_022156090.1 uncharacterized protein LOC111023059 [Momordica charantia]

2.3e-59

88.57

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Query:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS
        MLRWCAKLRSAAA+PSQ+VHSVSST RIFHSSPSLYQPLHF+P+NLSSRS+FNASL TH SLAAYQCI  S  PL VVQVRHVSSRERRK+RKPMTPVTS
Subjt:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA
        KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAH K+
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA

XP_022931031.1 uncharacterized protein LOC111437349 [Cucurbita moschata]

8.0e-57

85.71

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Query:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS
        MLRWC+KLRSAAA+PSQIVHSVSST RIFHS+PSLYQPLHFSP+NLSSRSL NASL TH SLAAYQCI  SLSPL  VQVRHVSSRER+K+RKPMTPVTS
Subjt:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAH K+
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA

XP_022996248.1 uncharacterized protein LOC111491530 [Cucurbita maxima]

2.1e-57

86.43

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Query:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS
        MLRWC+KLRSAAA+PSQIVHSVSST RIFHS PSLYQPLHFSP+NLSSRSL NASL TH SLAAYQCI  SLSPL  VQVRHVSSRER+K+RKPMTPVTS
Subjt:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA
        KLKKTK+KFYSSYKSRFW+ KDGSIKRRKEGKRHNAH K+
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA

XP_023532529.1 uncharacterized protein LOC111794661 [Cucurbita pepo subsp. pepo]

8.0e-57

85.71

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Query:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS
        MLRWC+KLRSAAA+PSQIVHSVSST RIFHS+PSLYQPLHFSP+NLSSRSL NASL TH SLAAYQCI  SLSPL  VQVRHVSSRER+K+RKPMTPVTS
Subjt:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAH K+
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CDR4 uncharacterized protein LOC103499252

2.6e-53

82.86

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Query:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS
        MLRWCAKLRSAAA+PSQIV SVSST RIFHS+PSLYQPLHFSP+NL+SRSLFNA   TH  LAAYQCI  SL PL VVQVRHVSSR+RR KRKP TP TS
Subjt:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA
        KLKKTK+K YSSYKSRFW+MKDGSIKRR EGKRHNAHSK+
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA

A0A5A7VRB4 50S ribosomal protein L35

9.0e-54

79.59

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Query:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS
        MLRWCAKLRSAAA+PSQIV SVSST RIFHS+PSLYQPLHFSP+NL+SRSLFNA   TH  LAAYQCI  SL PL VVQVRHVSSR+RR KRKP TP TS
Subjt:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKAVEDHVGY
        KLKKTK+K YSSYKSRFW+MKDGSIKRR EGKRHNAHSK    H  +
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKAVEDHVGY

A0A6J1DPB8 uncharacterized protein LOC111023059

1.1e-59

88.57

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Query:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS
        MLRWCAKLRSAAA+PSQ+VHSVSST RIFHSSPSLYQPLHF+P+NLSSRS+FNASL TH SLAAYQCI  S  PL VVQVRHVSSRERRK+RKPMTPVTS
Subjt:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA
        KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAH K+
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA

A0A6J1ESK5 uncharacterized protein LOC111437349

3.9e-57

85.71

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Query:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS
        MLRWC+KLRSAAA+PSQIVHSVSST RIFHS+PSLYQPLHFSP+NLSSRSL NASL TH SLAAYQCI  SLSPL  VQVRHVSSRER+K+RKPMTPVTS
Subjt:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA
        KLKKTK+K YSSYKSRFW+ KDGSIKRRKEGKRHNAH K+
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA

A0A6J1KAA4 uncharacterized protein LOC111491530

1.0e-57

86.43

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Query:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS
        MLRWC+KLRSAAA+PSQIVHSVSST RIFHS PSLYQPLHFSP+NLSSRSL NASL TH SLAAYQCI  SLSPL  VQVRHVSSRER+K+RKPMTPVTS
Subjt:  MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTS

Query:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA
        KLKKTK+KFYSSYKSRFW+ KDGSIKRRKEGKRHNAH K+
Subjt:  KLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G45590.1 Ribosomal protein L35

2.5e-16

38.56

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Query:  MLRWCAKLRSAAARPSQ-IVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPS--------LSPLCVVQVRHVSSRER---
        M R+C KLRS + + ++ +    +S  R+ H SP        SPS   + +    +  T +S      ++PS          P   VQVR+++S+E+   
Subjt:  MLRWCAKLRSAAARPSQ-IVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPS--------LSPLCVVQVRHVSSRER---

Query:  -RKKRKPMTPVTSKLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA
         +KK +P TP+TSK+KK K+KFYSS+K RF  + DG+I+R KEGKRHNAH K+
Subjt:  -RKKRKPMTPVTSKLKKTKMKFYSSYKSRFWMMKDGSIKRRKEGKRHNAHSKA

Sequences

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CDS sequence

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ATGCTCAGGTGGTGCGCCAAGCTCCGATCTGCGGCGGCGAGGCCATCTCAAATTGTACATTCCGTTTCTTCCACCTGCAGGATCTTTCACTCTTCTCCATCACTGTACCA
GCCTCTCCATTTCTCTCCCAGTAATTTGAGTTCCAGGTCCCTTTTCAATGCATCTCTACCGACTCATTATTCGCTCGCGGCTTACCAGTGTATTTGGCCATCGCTCTCGC
CTCTCTGTGTTGTTCAAGTGCGGCATGTTTCGTCAAGAGAGCGACGGAAGAAGAGAAAGCCGATGACACCAGTCACTTCCAAATTGAAAAAAACTAAGATGAAATTTTAC
TCGTCTTACAAGTCGAGGTTTTGGATGATGAAGGACGGGAGCATTAAACGTCGAAAGGAAGGGAAAAGGCATAATGCACATTCCAAGGCTGTTGAAGATCATGTTGGATA
CTGA

mRNA sequence

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Protein sequence

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MLRWCAKLRSAAARPSQIVHSVSSTCRIFHSSPSLYQPLHFSPSNLSSRSLFNASLPTHYSLAAYQCIWPSLSPLCVVQVRHVSSRERRKKRKPMTPVTSKLKKTKMKFY
SSYKSRFWMMKDGSIKRRKEGKRHNAHSKAVEDHVGY

Spg038025 (gene) of Sponge gourd (cylindrica) v1 genome