; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038066 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038066
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionprotein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like
Genome locationscaffold12:42384795..42387522
RNA-Seq ExpressionSpg038066
SyntenySpg038066
Gene Ontology termsGO:0009299 - mRNA transcription (biological process)
GO:0009416 - response to light stimulus (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR006936 - ALOG domain
IPR040222 - ALOG family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004152053.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3 [Cucumis sativus]5.5e-5195.37Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL--
        YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL  
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL--

Query:  -PTHGAPS
          THGA S
Subjt:  -PTHGAPS

XP_008447415.1 PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucumis melo]1.2e-5094.44Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL--
        YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPP+QLPL  
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL--

Query:  -PTHGAPS
          THGA S
Subjt:  -PTHGAPS

XP_022155631.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Momordica charantia]7.9e-5094.34Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPLP-
        YLDQFGKTKVH  ICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPLP 
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPLP-

Query:  --THGA
           HGA
Subjt:  --THGA

XP_022931179.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like [Cucurbita moschata]1.0e-4994.34Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL-P
        YLDQFGKTKVHT ICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISY+KKRKRPPSQ PL P
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL-P

Query:  THGAPS
         H APS
Subjt:  THGAPS

XP_023532602.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Cucurbita pepo subsp. pepo]1.0e-4994.34Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL-P
        YLDQFGKTKVHT ICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISY+KKRKRPPSQ PL P
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL-P

Query:  THGAPS
         H APS
Subjt:  THGAPS

TrEMBL top hitse value%identityAlignment
A0A0A0L7E1 ALOG domain-containing protein2.6e-5195.37Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL--
        YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL  
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL--

Query:  -PTHGAPS
          THGA S
Subjt:  -PTHGAPS

A0A1S3BGU6 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like5.9e-5194.44Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL--
        YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPP+QLPL  
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL--

Query:  -PTHGAPS
          THGA S
Subjt:  -PTHGAPS

A0A5D3DAV8 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like5.9e-5194.44Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL--
        YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPP+QLPL  
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL--

Query:  -PTHGAPS
          THGA S
Subjt:  -PTHGAPS

A0A6J1DS94 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like3.8e-5094.34Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPLP-
        YLDQFGKTKVH  ICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPLP 
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPLP-

Query:  --THGA
           HGA
Subjt:  --THGA

A0A6J1ETL1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3-like5.0e-5094.34Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL-P
        YLDQFGKTKVHT ICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISY+KKRKRPPSQ PL P
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPL-P

Query:  THGAPS
         H APS
Subjt:  THGAPS

SwissProt top hitse value%identityAlignment
A2XAV5 Protein G1-like62.6e-4382.98Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPS
        Y+DQFGKTKVHT +CPFYG PNPPAPCPCPLRQAWGSLDAL+GRLRAA+EENGG PE NPFGARAVRLYLREVR+ Q++ARGISYEKK+++ PS
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPS

A2YG32 Protein G1-like24.4e-4387.37Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKK-RKRPPS
        YLDQFGKTKVH A CPF+G P+PPAPCPCPLRQAWGSLDALVGRLRAAFEE+GG+PEANPFGARAVRLYLREVRD Q+KARGI+YEKK RKRPP+
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKK-RKRPPS

O82268 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 31.8e-4488.17Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPP
        YLDQFGKTKVHT IC FYG PNPPAPCPCPLRQAWGSLDAL+GRLRAAFEENGGKPE NPFGARAVRLYLREVRD+QSKARG+SYEKK+++ P
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPP

Q6K5X1 Protein G1-like62.6e-4382.98Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPS
        Y+DQFGKTKVHT +CPFYG PNPPAPCPCPLRQAWGSLDAL+GRLRAA+EENGG PE NPFGARAVRLYLREVR+ Q++ARGISYEKK+++ PS
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPS

Q9LW68 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 43.0e-4486.73Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYE-KKRKRPPSQLP
        YLDQFGKTKVHT +CPF+G PNPPAPC CPLRQAWGSLDAL+GRLRAAFEENGG PE NPFGARAVRLYLREVRD Q+KARGISYE KKRKRPP  LP
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYE-KKRKRPPSQLP

Arabidopsis top hitse value%identityAlignment
AT1G07090.1 Protein of unknown function (DUF640)2.3e-3975.79Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYE-KKRKRPPS
        YLDQFGKTKVH A CP++G   PP+PC CPL+QAWGSLDAL+GRLRAA+EENGG+P++NPF ARAVR+YLREVR+ Q+KARGI YE KKRKRPP+
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYE-KKRKRPPS

AT2G31160.1 Protein of unknown function (DUF640)1.3e-4588.17Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPP
        YLDQFGKTKVHT IC FYG PNPPAPCPCPLRQAWGSLDAL+GRLRAAFEENGGKPE NPFGARAVRLYLREVRD+QSKARG+SYEKK+++ P
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPP

AT3G04510.1 Protein of unknown function (DUF640)4.9e-4272.48Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKR---------
        YLDQFGKTKVH   C F+GLPNPPAPCPCPLRQAWGSLDAL+GRLRAA+EENGG PE +PFG+R+VR++LREVRD Q+K+RG+SYEKKRKR         
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKR---------

Query:  -PPSQLPLP
         P SQ PLP
Subjt:  -PPSQLPLP

AT3G23290.2 Protein of unknown function (DUF640)2.1e-4586.73Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYE-KKRKRPPSQLP
        YLDQFGKTKVHT +CPF+G PNPPAPC CPLRQAWGSLDAL+GRLRAAFEENGG PE NPFGARAVRLYLREVRD Q+KARGISYE KKRKRPP  LP
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYE-KKRKRPPSQLP

AT5G28490.1 Protein of unknown function (DUF640)1.5e-4382.47Show/hide
Query:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLP
        YLDQFGKTKVH   C F+GLPNPPAPCPCPLRQAWGSLDAL+GRLRAA+EENGG PEANPFG+RAVRL+LREVRD Q+KARG+SYEKKRKR   Q P
Subjt:  YLDQFGKTKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGCAACAGAGCCGCTGAGACTATTGATCACCTGTTTTTACATTGCAGTTATGCTCAGTCTTTTTGGATTGCTTTTCAGCAGGGCTTGGGTACGAGTTGGCCTCTCCC
TCTCCGGATTGACTCCTTTTGTGAGGAATTCCTTGCACGCAAACTCAAATCTCAGAAGGCTATCCTCAAAGTCAACCTCTTTGTAGCCATCATTTGGTCCATCTGGATCG
AAAGGATTGCCCGGACTTTTCAAGATAAGCATAAATCGTTGTTCTCGCTTTGGGAAGATTCTGTTTCTCTAGCAGGTTTTTGGTCCTCGTACCTGGATCAATTTGGAAAG
ACGAAAGTGCACACGGCCATCTGCCCTTTCTACGGGCTCCCGAACCCTCCCGCGCCGTGCCCGTGCCCTCTTCGGCAGGCGTGGGGGAGCCTCGATGCTTTGGTCGGGCG
CCTTCGAGCCGCTTTCGAGGAGAATGGTGGGAAGCCTGAAGCCAATCCATTTGGGGCTAGAGCTGTGAGGCTCTATCTTCGTGAGGTTCGTGATTTGCAGTCAAAGGCGA
GAGGGATCAGCTACGAGAAGAAAAGAAAGCGCCCACCATCTCAATTGCCATTGCCTACTCATGGTGCACCTTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGTGCAACAGAGCCGCTGAGACTATTGATCACCTGTTTTTACATTGCAGTTATGCTCAGTCTTTTTGGATTGCTTTTCAGCAGGGCTTGGGTACGAGTTGGCCTCTCCC
TCTCCGGATTGACTCCTTTTGTGAGGAATTCCTTGCACGCAAACTCAAATCTCAGAAGGCTATCCTCAAAGTCAACCTCTTTGTAGCCATCATTTGGTCCATCTGGATCG
AAAGGATTGCCCGGACTTTTCAAGATAAGCATAAATCGTTGTTCTCGCTTTGGGAAGATTCTGTTTCTCTAGCAGGTTTTTGGTCCTCGTACCTGGATCAATTTGGAAAG
ACGAAAGTGCACACGGCCATCTGCCCTTTCTACGGGCTCCCGAACCCTCCCGCGCCGTGCCCGTGCCCTCTTCGGCAGGCGTGGGGGAGCCTCGATGCTTTGGTCGGGCG
CCTTCGAGCCGCTTTCGAGGAGAATGGTGGGAAGCCTGAAGCCAATCCATTTGGGGCTAGAGCTGTGAGGCTCTATCTTCGTGAGGTTCGTGATTTGCAGTCAAAGGCGA
GAGGGATCAGCTACGAGAAGAAAAGAAAGCGCCCACCATCTCAATTGCCATTGCCTACTCATGGTGCACCTTCATGA
Protein sequenceShow/hide protein sequence
MCNRAAETIDHLFLHCSYAQSFWIAFQQGLGTSWPLPLRIDSFCEEFLARKLKSQKAILKVNLFVAIIWSIWIERIARTFQDKHKSLFSLWEDSVSLAGFWSSYLDQFGK
TKVHTAICPFYGLPNPPAPCPCPLRQAWGSLDALVGRLRAAFEENGGKPEANPFGARAVRLYLREVRDLQSKARGISYEKKRKRPPSQLPLPTHGAPS