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Spg038082 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038082
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionSWIM-type domain-containing protein
Genome locationscaffold12:39824362..39826950
RNA-Seq ExpressionSpg038082
SyntenySpg038082
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PWA56593.1 DNA-binding WRKY [Artemisia annua]2.9e-0729.69Show/hide
Query:  MEEKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQ
        M  K ++LLCY  G   DGP G+ +  PPSK I  Q G  F+EL  +L+           +++  R P S   K  +++PL + +D+D++ M  +    Q
Subjt:  MEEKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQ

Query:  VPSCVELYIKRSQTFASQIPTTSLKRKL
          S ++LY++      ++I   + K+ L
Subjt:  VPSCVELYIKRSQTFASQIPTTSLKRKL

RVX08500.1 hypothetical protein CK203_014195 [Vitis vinifera]5.5e-0629.06Show/hide
Query:  LLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPA--SNVSKSTRFVPLLLRNDNDVKFMTTIATHLQVPSCV
        +LCYT G   D   G+ +  PP KG++      FDEL+ +L    +      +L + +R P    N   +  +VPL +R+D DV  M T+      P+ +
Subjt:  LLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPA--SNVSKSTRFVPLLLRNDNDVKFMTTIATHLQVPSCV

Query:  ELYIKRSQTFASQIPTT
        E+Y + S      +P++
Subjt:  ELYIKRSQTFASQIPTT

XP_023741643.1 uncharacterized protein LOC111889720 isoform X2 [Lactuca sativa]1.2e-0531.19Show/hide
Query:  KVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKR--LNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQV
        +V+ +LCY  G T DGP+GI++   P K I       FDEL  R  L   FD       + + YR P+  +    +++PL +++++DV  M  +    Q 
Subjt:  KVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKR--LNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQV

Query:  PSCVELYIK
         S ++LY++
Subjt:  PSCVELYIK

XP_023765763.1 uncharacterized protein LOC111914214 [Lactuca sativa]1.2e-0531.82Show/hide
Query:  MEEKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQ
        M  K + LLCY +G   DG  GI++   PSK I  Q G  F++L  +++           +++  R P S V K  +++PL +++DNDV+ M  + +  Q
Subjt:  MEEKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQ

Query:  VPSCVELYIK
          S ++LY++
Subjt:  VPSCVELYIK

XP_042754022.1 uncharacterized protein LOC111889720 isoform X1 [Lactuca sativa]1.2e-0531.19Show/hide
Query:  KVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKR--LNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQV
        +V+ +LCY  G T DGP+GI++   P K I       FDEL  R  L   FD       + + YR P+  +    +++PL +++++DV  M  +    Q 
Subjt:  KVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKR--LNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQV

Query:  PSCVELYIK
         S ++LY++
Subjt:  PSCVELYIK

TrEMBL top hitse value%identityAlignment
A0A2U1M5P5 DNA-binding WRKY1.4e-0729.69Show/hide
Query:  MEEKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQ
        M  K ++LLCY  G   DGP G+ +  PPSK I  Q G  F+EL  +L+           +++  R P S   K  +++PL + +D+D++ M  +    Q
Subjt:  MEEKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQ

Query:  VPSCVELYIKRSQTFASQIPTTSLKRKL
          S ++LY++      ++I   + K+ L
Subjt:  VPSCVELYIKRSQTFASQIPTTSLKRKL

A0A2U1NKX3 MuDR family transposase1.3e-0529.36Show/hide
Query:  MEEKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQ
        M  K + LLCY +G   DGP G+ +  PPSK I  Q G  +++L  +++           +++  R P +   K  +++ L + ++NDV+ M  + T  +
Subjt:  MEEKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQ

Query:  VPSCVELYI
          S ++LYI
Subjt:  VPSCVELYI

A0A2U1Q3T2 MuDR family transposase2.2e-0530.7Show/hide
Query:  MEEKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQ
        M  K + LLCY +G   DGP G+ +   PSK I  Q G  +DEL  +++           ++I  R P +   K  +++ L + ++NDV  M  + T  +
Subjt:  MEEKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQ

Query:  VPSCVELYIKRSQT
          S ++LYI+   T
Subjt:  VPSCVELYIKRSQT

A0A438HFK5 SWIM-type domain-containing protein1.4e-0424.55Show/hide
Query:  EKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCP--ASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQ
        + ++ ++CY +G   DGPNG+ +  PP KG+       +DEL+ +L            L + +R P   S  + +  ++ L +++D+DV+ M  +   + 
Subjt:  EKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCP--ASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQ

Query:  VPSCVELYIK
          + +E+Y++
Subjt:  VPSCVELYIK

A0A438JHT2 Uncharacterized protein2.6e-0629.06Show/hide
Query:  LLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPA--SNVSKSTRFVPLLLRNDNDVKFMTTIATHLQVPSCV
        +LCYT G   D   G+ +  PP KG++      FDEL+ +L    +      +L + +R P    N   +  +VPL +R+D DV  M T+      P+ +
Subjt:  LLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPA--SNVSKSTRFVPLLLRNDNDVKFMTTIATHLQVPSCV

Query:  ELYIKRSQTFASQIPTT
        E+Y + S      +P++
Subjt:  ELYIKRSQTFASQIPTT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGAAGGTTATACTCTTATTGTGCTATACAGAGGGAGTGACTAACGATGGACCAAATGGTATATCCTTTAGAGGACCTCCATCGAAAGGAATTACATTTCAAGA
AGGCAAGGGATTTGATGAGTTGAAAAAGAGGTTGAATGATGAATTTGACACTCTAGGAGGGCTTGGAGAGTTGGAAATAACTTATCGATGTCCTGCAAGTAATGTATCAA
AGTCTACTCGATTTGTGCCTCTGCTCCTTCGAAATGATAATGACGTGAAGTTTATGACCACTATTGCCACTCATTTACAAGTTCCTAGTTGTGTAGAGTTGTATATTAAG
AGATCTCAAACCTTTGCATCACAAATTCCAACCACAAGTCTAAAGAGAAAGTTGGACGCAAGTGAATTATTAAGTTTTCGTAATCGGCAGAATGCATATGAAGAATTTCC
TAGATGGATGAACATGTTTAAAACCTCTGGTTCTTCCTTACACCATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGAAGGTTATACTCTTATTGTGCTATACAGAGGGAGTGACTAACGATGGACCAAATGGTATATCCTTTAGAGGACCTCCATCGAAAGGAATTACATTTCAAGA
AGGCAAGGGATTTGATGAGTTGAAAAAGAGGTTGAATGATGAATTTGACACTCTAGGAGGGCTTGGAGAGTTGGAAATAACTTATCGATGTCCTGCAAGTAATGTATCAA
AGTCTACTCGATTTGTGCCTCTGCTCCTTCGAAATGATAATGACGTGAAGTTTATGACCACTATTGCCACTCATTTACAAGTTCCTAGTTGTGTAGAGTTGTATATTAAG
AGATCTCAAACCTTTGCATCACAAATTCCAACCACAAGTCTAAAGAGAAAGTTGGACGCAAGTGAATTATTAAGTTTTCGTAATCGGCAGAATGCATATGAAGAATTTCC
TAGATGGATGAACATGTTTAAAACCTCTGGTTCTTCCTTACACCATTAG
Protein sequenceShow/hide protein sequence
MEEKVILLLCYTEGVTNDGPNGISFRGPPSKGITFQEGKGFDELKKRLNDEFDTLGGLGELEITYRCPASNVSKSTRFVPLLLRNDNDVKFMTTIATHLQVPSCVELYIK
RSQTFASQIPTTSLKRKLDASELLSFRNRQNAYEEFPRWMNMFKTSGSSLHH