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Spg038093 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038093
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptiont-SNARE coiled-coil homology domain-containing protein
Genome locationscaffold12:42600631..42603199
RNA-Seq ExpressionSpg038093
SyntenySpg038093
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR57117.1 hypothetical protein CICLE_v10022892mg [Citrus clementina]1.4e-0555.36Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTVSPCIRSQVEPKDVLISRTFRGNFLHRVLSH
        ML+RMGNDMD+SRGVLSGTMD+FK V    R Q+E ++V       G+F + +LSH
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTVSPCIRSQVEPKDVLISRTFRGNFLHRVLSH
KAF9686869.1 hypothetical protein SADUNF_Sadunf02G0034500 [Salix dunnii]2.7e-04100Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTV
        MLDRMGNDMDSSRGVLSGTMDRFKTV
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTV
KAG2258444.1 hypothetical protein Bca52824_077738 [Brassica carinata]1.6e-0462Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTVSPCIRSQVEPKDVLISRTFRGNFL
        MLDRMGNDMDSSRG+LSGTMDRFKTV     SQ   + + +  +F G FL
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTVSPCIRSQVEPKDVLISRTFRGNFL
KAG6606386.1 Bet1-like SNARE 1-1, partial [Cucurbita argyrosperma subsp. sororia]2.7e-04100Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTV
        MLDRMGNDMDSSRGVLSGTMDRFKTV
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTV
VVB06124.1 unnamed protein product [Arabis nemorensis]3.2e-0546.27Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTVSP---------CIRSQVEPKDVLISRTFRGNFLHRVLSHKV
        MLDRMGNDMDSSRG+LSGTMDRFKTV P             +++PK+       RG     +L + +
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTVSP---------CIRSQVEPKDVLISRTFRGNFLHRVLSHKV
TrEMBL top hitse value%identityAlignment
A0A565BXP8 t-SNARE coiled-coil homology domain-containing protein1.5e-0546.27Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTVSP---------CIRSQVEPKDVLISRTFRGNFLHRVLSHKV
        MLDRMGNDMDSSRG+LSGTMDRFKTV P             +++PK+       RG     +L + +
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTVSP---------CIRSQVEPKDVLISRTFRGNFLHRVLSHKV
A0A6J1CYB1 bet1-like SNARE 1-11.3e-04100Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTV
        MLDRMGNDMDSSRGVLSGTMDRFKTV
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTV
A0A6P4DTL9 bet1-like SNARE 1-1 isoform X11.3e-0469.23Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTVSPCIRSQVEPKDV
        MLDRMGNDMDSSRGVLSGTMD+FK V      +++PK+V
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTVSPCIRSQVEPKDV
A0A7J6GWK3 t-SNARE coiled-coil homology domain-containing protein1.3e-04100Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTV
        MLDRMGNDMDSSRGVLSGTMDRFKTV
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTV
V4TUE0 t-SNARE coiled-coil homology domain-containing protein6.9e-0655.36Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTVSPCIRSQVEPKDVLISRTFRGNFLHRVLSH
        ML+RMGNDMD+SRGVLSGTMD+FK V    R Q+E ++V       G+F + +LSH
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTVSPCIRSQVEPKDVLISRTFRGNFLHRVLSH
SwissProt top hitse value%identityAlignment
Q9M2J9 Bet1-like SNARE 1-11.3e-0696.15Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTV
        MLDRMGNDMDSSRG LSGTMDRFKTV
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTV
Arabidopsis top hitse value%identityAlignment
AT3G58170.1 BET1P/SFT1P-like protein 14A9.5e-0896.15Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTV
        MLDRMGNDMDSSRG LSGTMDRFKTV
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTV
AT4G14455.1 Target SNARE coiled-coil domain protein6.4e-0461.54Show/hide
Query:  MLDRMGNDMDSSRGVLSGTMDRFKTV
        +LD++GN MDS+RG++SGT++RFK V
Subjt:  MLDRMGNDMDSSRGVLSGTMDRFKTV

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGATAGGATGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCAGGCACCATGGATCGATTCAAGACGGTATCGCCATGTATTCGATCCCAAGTCGAGCCCAA
AGATGTTCTCATTAGTCGCACTTTTCGTGGCAATTTTCTTCATCGTGTACTATCTCACAAGGTAATCCTCCCTCCTCCCGTATGGATATCGAAAGAACTCGAGCTTCTCG
CCCCTGGATGGAAGACAATGATCAGTATTGCTGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTGGATAGGATGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCAGGCACCATGGATCGATTCAAGACGGTATCGCCATGTATTCGATCCCAAGTCGAGCCCAA
AGATGTTCTCATTAGTCGCACTTTTCGTGGCAATTTTCTTCATCGTGTACTATCTCACAAGGTAATCCTCCCTCCTCCCGTATGGATATCGAAAGAACTCGAGCTTCTCG
CCCCTGGATGGAAGACAATGATCAGTATTGCTGCTTAG
Protein sequenceShow/hide protein sequence
MLDRMGNDMDSSRGVLSGTMDRFKTVSPCIRSQVEPKDVLISRTFRGNFLHRVLSHKVILPPPVWISKELELLAPGWKTMISIAA