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Spg038185 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038185
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
Descriptionvacuolar protein sorting-associated protein 55 homolog
Genome locationscaffold12:40380119..40382648
RNA-Seq ExpressionSpg038185
SyntenySpg038185
Gene Ontology termsGO:0032511 - late endosome to vacuole transport via multivesicular body sorting pathway (biological process)
GO:0005768 - endosome (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR007262 - Vps55/LEPROT


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8055554.1 hypothetical protein FH972_012387 [Carpinus fangiana]3.3e-4975.19Show/hide
Query:  NCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGAL
        +CLHT K+  L ILVSGGIVLQ LACALYNNWWP+L+V+MYVLLPMPLLFFAGSDSSSLFSES ++WVNATKFLTGAS +GS+AIP ILKHA +IGWGAL
Subjt:  NCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGAL

Query:  ALDLSSLLVFVVAIFCYLWMSNEDDYNIL
        A++ SS  +FV+AI CY+ M++EDDYN+L
Subjt:  ALDLSSLLVFVVAIFCYLWMSNEDDYNIL

XP_006436802.1 vacuolar protein sorting-associated protein 55 homolog [Citrus clementina]9.6e-4975.36Show/hide
Query:  MADLGN----CLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH
        MADL      CLHT K+  L ILVSGGIVLQ LACALYNNWWP+L+V+MYVLLP+PLLFFAGS+ SSLFSES +SWVNATKFLTGASAVGSIAIPVILKH
Subjt:  MADLGN----CLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL
        A +IGWGALA++LSS  V V+AI CY+ MS +DDY+IL
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL

XP_021599879.1 vacuolar protein sorting-associated protein 55 homolog [Manihot esculenta]4.3e-4975.36Show/hide
Query:  MADLGN----CLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH
        MADL      CL + K+  L ILVSGGI+LQ LACALYNNWWP+LSV+MYVLLPMPLLFFAGSDSSSLFSES +SWVNATKFLTGASAVGSIAIP ILKH
Subjt:  MADLGN----CLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL
        A +IGWGALA++LSS  VFV+AI CY+ M++ED Y+IL
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL

XP_022157395.1 vacuolar protein sorting-associated protein 55 homolog [Momordica charantia]3.5e-5988.81Show/hide
Query:  MADLGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADII
        MADLG C H SK+VTLG+LVSGGIVLQFLAC LY NWWPLLSV+MY+LLPMPLLFFAGSD+SSL SESGDSWVNATKFLTGAS VGSIAIPVILKHA+II
Subjt:  MADLGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADII

Query:  GWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL
        GWGALALDLSSLLVFVVAI CYLWMSNEDDYN L
Subjt:  GWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL

XP_038679642.1 vacuolar protein sorting-associated protein 55 homolog [Tripterygium wilfordii]1.5e-4975.36Show/hide
Query:  MADL----GNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH
        MADL     +CLHT K+  L ILVSGGIVLQ LACALYNNWWP+L+V+MYVLLPMPLLFFAGSD S+L SES DSWVNATKFLTGASAVGSIAIP ILKH
Subjt:  MADL----GNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL
        A +IGWGALA++LSS  VFV+AI CY+ M  EDDY++L
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL

TrEMBL top hitse value%identityAlignment
A0A2C9U468 Uncharacterized protein2.1e-4975.36Show/hide
Query:  MADLGN----CLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH
        MADL      CL + K+  L ILVSGGI+LQ LACALYNNWWP+LSV+MYVLLPMPLLFFAGSDSSSLFSES +SWVNATKFLTGASAVGSIAIP ILKH
Subjt:  MADLGN----CLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL
        A +IGWGALA++LSS  VFV+AI CY+ M++ED Y+IL
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL

A0A2H5PBE6 Uncharacterized protein4.6e-4975.36Show/hide
Query:  MADLGN----CLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH
        MADL      CLHT K+  L ILVSGGIVLQ LACALYNNWWP+L+V+MYVLLP+PLLFFAGS+ SSLFSES +SWVNATKFLTGASAVGSIAIPVILKH
Subjt:  MADLGN----CLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL
        A +IGWGALA++LSS  V V+AI CY+ MS +DDY+IL
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL

A0A5N6R6S4 Uncharacterized protein1.6e-4975.19Show/hide
Query:  NCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGAL
        +CLHT K+  L ILVSGGIVLQ LACALYNNWWP+L+V+MYVLLPMPLLFFAGSDSSSLFSES ++WVNATKFLTGAS +GS+AIP ILKHA +IGWGAL
Subjt:  NCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGAL

Query:  ALDLSSLLVFVVAIFCYLWMSNEDDYNIL
        A++ SS  +FV+AI CY+ M++EDDYN+L
Subjt:  ALDLSSLLVFVVAIFCYLWMSNEDDYNIL

A0A6J1DSZ0 vacuolar protein sorting-associated protein 55 homolog1.7e-5988.81Show/hide
Query:  MADLGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADII
        MADLG C H SK+VTLG+LVSGGIVLQFLAC LY NWWPLLSV+MY+LLPMPLLFFAGSD+SSL SESGDSWVNATKFLTGAS VGSIAIPVILKHA+II
Subjt:  MADLGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADII

Query:  GWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL
        GWGALALDLSSLLVFVVAI CYLWMSNEDDYN L
Subjt:  GWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL

A0A7J7CJN6 Vacuolar protein sorting 55 (VPS55) family protein isoform 17.2e-5075.36Show/hide
Query:  MADL----GNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH
        MADL     +CLHT K+  L ILVSGGIVLQ LACALYNNWWP+L+V+MYVLLPMPLLFFAGSD S+L SES DSWVNATKFLTGASAVGSIAIP ILKH
Subjt:  MADL----GNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKH

Query:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL
        A +IGWGALA++LSS  VFV+AI CY+ M  EDDY++L
Subjt:  ADIIGWGALALDLSSLLVFVVAIFCYLWMSNEDDYNIL

SwissProt top hitse value%identityAlignment
P47111 Vacuolar protein sorting-associated protein 553.5e-0929.92Show/hide
Query:  SKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMP-LLFFAGS--DSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALAL
        +K+++L   ++ G +L  L+CAL++N++PL  +++++L P+P  +F AG+   +S   S+S ++  +   FLTG      IA+PV+  H  +IG  +  +
Subjt:  SKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMP-LLFFAGS--DSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALAL

Query:  DLSSLLVFVVAIFCYLWM----SNEDD
         +   L+   +I  + W      NEDD
Subjt:  DLSSLLVFVVAIFCYLWM----SNEDD

Q32PD8 Leptin receptor overlapping transcript-like 13.6e-0629.91Show/hide
Query:  GIVLQFLACAL--YNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATK----FLTGASAVGSIAIPVILKHADIIGWGALALDLS-SLLVF
        G++   L CAL  YN +WPL  +  Y+L P+P         +    +  D+  NA K    FLT    V +  +P++   A++I WGA AL L+ + ++F
Subjt:  GIVLQFLACAL--YNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATK----FLTGASAVGSIAIPVILKHADIIGWGALALDLS-SLLVF

Query:  VVAIFCYLWMSNEDDYN
           +  +L   + DD++
Subjt:  VVAIFCYLWMSNEDDYN

Q54VP1 Vacuolar protein sorting-associated protein 55 homolog2.5e-0731.86Show/hide
Query:  GIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALALDLSSLLVFVVAIFCY
        G++   LAC + ++ +P++ V  Y L P P +     DS   FS    ++ +   FLTG       AIP+IL H+DII   ALA  ++  +     I  +
Subjt:  GIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALALDLSSLLVFVVAIFCY

Query:  LWM---SNEDDYN
        LW     N++D N
Subjt:  LWM---SNEDDYN

Q9AST6 Vacuolar protein sorting-associated protein 55 homolog1.9e-4470.87Show/hide
Query:  LGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG
        L  CL   K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSDS+SLF+ES +SW+NA KFLTGASAVGS+AIP ILKHA +IGWG
Subjt:  LGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG

Query:  ALALDLSSLLVFVVAIFCYLWMSNEDD
        ALALDLSS +VF+VAI  Y+ + +  D
Subjt:  ALALDLSSLLVFVVAIFCYLWMSNEDD

Q9UUH1 Vacuolar protein sorting-associated protein 553.8e-0826.83Show/hide
Query:  KVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMP-LLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALALDL-
        K++ L  +++ G +L  L+CAL+ NW+PLL V+ ++L P+P LL    S S     E   + ++  +F  GA+     A+P++  +  +IG  A  +   
Subjt:  KVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMP-LLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALALDL-

Query:  -SSLLVFVVAIFCYLWMSNEDDY
          S++  V+ ++   ++ +E+++
Subjt:  -SSLLVFVVAIFCYLWMSNEDDY

Arabidopsis top hitse value%identityAlignment
AT1G32410.1 Vacuolar protein sorting 55 (VPS55) family protein1.4e-4570.87Show/hide
Query:  LGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG
        L  CL   K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSDS+SLF+ES +SW+NA KFLTGASAVGS+AIP ILKHA +IGWG
Subjt:  LGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG

Query:  ALALDLSSLLVFVVAIFCYLWMSNEDD
        ALALDLSS +VF+VAI  Y+ + +  D
Subjt:  ALALDLSSLLVFVVAIFCYLWMSNEDD

AT1G32410.2 Vacuolar protein sorting 55 (VPS55) family protein1.4e-4570.87Show/hide
Query:  LGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG
        L  CL   K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSDS+SLF+ES +SW+NA KFLTGASAVGS+AIP ILKHA +IGWG
Subjt:  LGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG

Query:  ALALDLSSLLVFVVAIFCYLWMSNEDD
        ALALDLSS +VF+VAI  Y+ + +  D
Subjt:  ALALDLSSLLVFVVAIFCYLWMSNEDD

AT1G32410.3 Vacuolar protein sorting 55 (VPS55) family protein1.4e-4570.87Show/hide
Query:  LGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG
        L  CL   K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSDS+SLF+ES +SW+NA KFLTGASAVGS+AIP ILKHA +IGWG
Subjt:  LGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG

Query:  ALALDLSSLLVFVVAIFCYLWMSNEDD
        ALALDLSS +VF+VAI  Y+ + +  D
Subjt:  ALALDLSSLLVFVVAIFCYLWMSNEDD

AT1G32410.4 Vacuolar protein sorting 55 (VPS55) family protein1.4e-4570.87Show/hide
Query:  LGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG
        L  CL   K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSDS+SLF+ES +SW+NA KFLTGASAVGS+AIP ILKHA +IGWG
Subjt:  LGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG

Query:  ALALDLSSLLVFVVAIFCYLWMSNEDD
        ALALDLSS +VF+VAI  Y+ + +  D
Subjt:  ALALDLSSLLVFVVAIFCYLWMSNEDD

AT1G32410.5 Vacuolar protein sorting 55 (VPS55) family protein1.4e-4570.87Show/hide
Query:  LGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG
        L  CL   K+  L ILVS GIVLQ LACAL+NNWWP+LSV+MYVLLPMPLLFF GSDS+SLF+ES +SW+NA KFLTGASAVGS+AIP ILKHA +IGWG
Subjt:  LGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWG

Query:  ALALDLSSLLVFVVAIFCYLWMSNEDD
        ALALDLSS +VF+VAI  Y+ + +  D
Subjt:  ALALDLSSLLVFVVAIFCYLWMSNEDD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGACTTGGGAAACTGCTTGCATACGAGCAAAGTTGTAACGCTAGGAATCTTGGTTTCTGGAGGAATTGTGTTGCAGTTTTTGGCATGTGCTTTGTACAATAACTG
GTGGCCATTGCTGAGTGTGGTTATGTATGTTCTTCTCCCAATGCCTTTGCTGTTTTTTGCTGGCTCTGATAGTTCTTCGCTATTTTCCGAATCTGGAGACAGCTGGGTGA
ATGCAACTAAATTTTTAACTGGAGCTTCAGCAGTTGGAAGCATTGCCATACCTGTAATTTTGAAGCATGCTGATATTATCGGTTGGGGAGCACTTGCACTGGACCTCTCG
TCCCTTCTAGTTTTTGTGGTGGCCATTTTTTGTTATCTCTGGATGAGTAATGAAGACGACTATAATATACTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGACTTGGGAAACTGCTTGCATACGAGCAAAGTTGTAACGCTAGGAATCTTGGTTTCTGGAGGAATTGTGTTGCAGTTTTTGGCATGTGCTTTGTACAATAACTG
GTGGCCATTGCTGAGTGTGGTTATGTATGTTCTTCTCCCAATGCCTTTGCTGTTTTTTGCTGGCTCTGATAGTTCTTCGCTATTTTCCGAATCTGGAGACAGCTGGGTGA
ATGCAACTAAATTTTTAACTGGAGCTTCAGCAGTTGGAAGCATTGCCATACCTGTAATTTTGAAGCATGCTGATATTATCGGTTGGGGAGCACTTGCACTGGACCTCTCG
TCCCTTCTAGTTTTTGTGGTGGCCATTTTTTGTTATCTCTGGATGAGTAATGAAGACGACTATAATATACTCTAA
Protein sequenceShow/hide protein sequence
MADLGNCLHTSKVVTLGILVSGGIVLQFLACALYNNWWPLLSVVMYVLLPMPLLFFAGSDSSSLFSESGDSWVNATKFLTGASAVGSIAIPVILKHADIIGWGALALDLS
SLLVFVVAIFCYLWMSNEDDYNIL