; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Spg038223 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038223
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationscaffold12:41613014..41614068
RNA-Seq ExpressionSpg038223
SyntenySpg038223
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022146384.1 putative CCR4-associated factor 1 homolog 8 [Momordica charantia]1.1e-11167.53Show/hide
Query:  RVVPEKTTGEAPISLSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFN
        + +  K+T  AP S+ H NREVWS NLREELELL EYLPEFP+V ID EFPGFL   PKG+SEEEFY CLRFNVNRL+ILQLGLTL +Q G+I +TWEFN
Subjt:  RVVPEKTTGEAPISLSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFN

Query:  FRGFDHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKY
        FR FDH+SDME VSSLDSFLKNKGFDF KL+  GIA E+FT LFLPICRSG+I RWITFHG YDI YL+KLL ++S+  SMA FA  AQ LLGT+ DLK+
Subjt:  FRGFDHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKY

Query:  MPRFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRV------HVLTPPLP-PPKCSLSSFA
        M R+CDGLL+G LGL KLAKLLDVKRI  AHFA SD+L T SV+ KMK  FKLP EQCEGFLYGLP+ I   + V        +TPP P P K S+ SF 
Subjt:  MPRFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRV------HVLTPPLP-PPKCSLSSFA

Query:  RSSPVFVG
         S+P+ VG
Subjt:  RSSPVFVG

XP_022154798.1 probable CCR4-associated factor 1 homolog 6 [Momordica charantia]2.6e-11665.56Show/hide
Query:  EKTTGEAPIS--LSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEF-----------------------------PGFLRYAPKGVSEEEFYDCLRFN
        EKT G++P +    H+NREVWSYNL +ELE+L EYLPEFPIVAIDTEF                             PGFLRY PKGVSEEEFYDCLRFN
Subjt:  EKTTGEAPIS--LSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEF-----------------------------PGFLRYAPKGVSEEEFYDCLRFN

Query:  VNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLN
        VNRL+ILQLGLTL NQNG++ +TWEFNFR FDHISDMEGVSSLDSFLKNKGFDF KL+ DGIA E+FT LFLPICRSGRI+RWITFHG YDIAYL+KLL 
Subjt:  VNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLN

Query:  VRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALR
        ++ +  SMA FAA AQ LLGT+ DLK+M R+CDGLL+G+LGL KLAKLLDVKRIG AHFAGSDSLLTA+V+ KMK  FK+P EQ EGFLYGLPHRI+A +
Subjt:  VRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALR

Query:  RVHVLTPPL----PPPKCSLSSFARSSPVFV
         +  +  P     PPP+     F    P F+
Subjt:  RVHVLTPPL----PPPKCSLSSFARSSPVFV

XP_022928830.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]1.2e-10069.85Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHISDMEGVSSLDSF
        REVWS+NL EE+EL+K YL EFPIVAIDTEFPGFLR+ PKGVS+EEFY CL+FNVNRLSILQLGLTLT+ NG IG+TWEFNF+ FD IS+MEGV SLDSF
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHISDMEGVSSLDSF

Query:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGLLNGELGLNKLA
        LKNKGF+F KLR+ GIAP+EF+  F P+ RSGRI +WITFHG YDIAYLMK  N+ SM TSM++FA  A  LLGT+ DLK+M R+ D L NG LGL KLA
Subjt:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGLLNGELGLNKLA

Query:  KLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPP
        KLL + R+GTAHFAGSDSLLTASV+AKMK   K+ P+  EGFLYGLP+ I+  R   V+  P
Subjt:  KLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPP

XP_022963784.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]7.5e-10068.48Show/hide
Query:  KTTGEAPISLSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFD
        K  GE  I      R+VWS+NL EE+EL+K+ L EFPIVAIDTEFPGFLR+ PKGVS+EEFY+CL+FNVNRLSILQLGLTLTN NG IG+TWEFNFR FD
Subjt:  KTTGEAPISLSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFD

Query:  HISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFC
         IS+MEGV SLDSFLKNKGF+F  LR+ GIAPEEF   F PI RSGRI RWITFHG YDIAYLMK  N+R M TSM+IFA  A  +LGT+ DLK+M  + 
Subjt:  HISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFC

Query:  DGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPP
          LL+G LGL KLAKLL V R GTAHFAGSDSLLTASV+AKMK   K+ P   EGFLYGLP+ I+  RR  V+  P
Subjt:  DGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPP

XP_023550519.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]5.2e-10170.61Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHISDMEGVSSLDSF
        REVWSYNL EE+EL+K YL EFPIVA+DTEFPGFLR+ PKGVS+EEFY CL+FNVNRLSILQLGLTL ++NG IG+TWEFNF+ FD IS+MEGV SLDSF
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHISDMEGVSSLDSF

Query:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGLLNGELGLNKLA
        LKNKGF+F KLR+ GIAPEEF+  F P+ RS RI RWITFHG YDIAYLMK  N+ SM TSM++FA  A  LLGT+ DLK+M R+ D L NG LGL KLA
Subjt:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGLLNGELGLNKLA

Query:  KLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPP
        KLL + RIGTAHFAGSDSLLTASV+AKMK   K+ P+  EGFLYGLP+ I+  RR  V+  P
Subjt:  KLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPP

TrEMBL top hitse value%identityAlignment
A0A6J1CXZ5 Poly(A)-specific ribonuclease5.4e-11267.53Show/hide
Query:  RVVPEKTTGEAPISLSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFN
        + +  K+T  AP S+ H NREVWS NLREELELL EYLPEFP+V ID EFPGFL   PKG+SEEEFY CLRFNVNRL+ILQLGLTL +Q G+I +TWEFN
Subjt:  RVVPEKTTGEAPISLSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFN

Query:  FRGFDHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKY
        FR FDH+SDME VSSLDSFLKNKGFDF KL+  GIA E+FT LFLPICRSG+I RWITFHG YDI YL+KLL ++S+  SMA FA  AQ LLGT+ DLK+
Subjt:  FRGFDHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKY

Query:  MPRFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRV------HVLTPPLP-PPKCSLSSFA
        M R+CDGLL+G LGL KLAKLLDVKRI  AHFA SD+L T SV+ KMK  FKLP EQCEGFLYGLP+ I   + V        +TPP P P K S+ SF 
Subjt:  MPRFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRV------HVLTPPLP-PPKCSLSSFA

Query:  RSSPVFVG
         S+P+ VG
Subjt:  RSSPVFVG

A0A6J1DLA5 Poly(A)-specific ribonuclease1.2e-11665.56Show/hide
Query:  EKTTGEAPIS--LSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEF-----------------------------PGFLRYAPKGVSEEEFYDCLRFN
        EKT G++P +    H+NREVWSYNL +ELE+L EYLPEFPIVAIDTEF                             PGFLRY PKGVSEEEFYDCLRFN
Subjt:  EKTTGEAPIS--LSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEF-----------------------------PGFLRYAPKGVSEEEFYDCLRFN

Query:  VNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLN
        VNRL+ILQLGLTL NQNG++ +TWEFNFR FDHISDMEGVSSLDSFLKNKGFDF KL+ DGIA E+FT LFLPICRSGRI+RWITFHG YDIAYL+KLL 
Subjt:  VNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLN

Query:  VRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALR
        ++ +  SMA FAA AQ LLGT+ DLK+M R+CDGLL+G+LGL KLAKLLDVKRIG AHFAGSDSLLTA+V+ KMK  FK+P EQ EGFLYGLPHRI+A +
Subjt:  VRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALR

Query:  RVHVLTPPL----PPPKCSLSSFARSSPVFV
         +  +  P     PPP+     F    P F+
Subjt:  RVHVLTPPL----PPPKCSLSSFARSSPVFV

A0A6J1ESM7 Poly(A)-specific ribonuclease5.6e-10169.85Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHISDMEGVSSLDSF
        REVWS+NL EE+EL+K YL EFPIVAIDTEFPGFLR+ PKGVS+EEFY CL+FNVNRLSILQLGLTLT+ NG IG+TWEFNF+ FD IS+MEGV SLDSF
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHISDMEGVSSLDSF

Query:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGLLNGELGLNKLA
        LKNKGF+F KLR+ GIAP+EF+  F P+ RSGRI +WITFHG YDIAYLMK  N+ SM TSM++FA  A  LLGT+ DLK+M R+ D L NG LGL KLA
Subjt:  LKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGLLNGELGLNKLA

Query:  KLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPP
        KLL + R+GTAHFAGSDSLLTASV+AKMK   K+ P+  EGFLYGLP+ I+  R   V+  P
Subjt:  KLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPP

A0A6J1HIZ7 Poly(A)-specific ribonuclease8.9e-9967.77Show/hide
Query:  GEAPISLSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHIS
        GE         R+VWS+NL EE+EL+++ L EFPIVA+DTEFPGFLR+ PKGVS+EEFY+CL+FNVNRLSILQLGLTLTN NG IG+TWEFNF+ FD IS
Subjt:  GEAPISLSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHIS

Query:  DMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGL
        +MEGV SLDSFLKNKGF+F  LR+ GIAPEEF   F PI RSGRI RWITFHG YDIAYLMKL N+  M TSM+IFA  A  LLGT+ DLK+M R  + L
Subjt:  DMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGL

Query:  LNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPP
         NG LGL KLAKLL V R GTAHFAGSDSLLTASV+AKMK   K+  +  EGFLYGLP+ I+  RR  V+  P
Subjt:  LNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPP

A0A6J1HL76 Poly(A)-specific ribonuclease3.6e-10068.48Show/hide
Query:  KTTGEAPISLSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFD
        K  GE  I      R+VWS+NL EE+EL+K+ L EFPIVAIDTEFPGFLR+ PKGVS+EEFY+CL+FNVNRLSILQLGLTLTN NG IG+TWEFNFR FD
Subjt:  KTTGEAPISLSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFD

Query:  HISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFC
         IS+MEGV SLDSFLKNKGF+F  LR+ GIAPEEF   F PI RSGRI RWITFHG YDIAYLMK  N+R M TSM+IFA  A  +LGT+ DLK+M  + 
Subjt:  HISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFC

Query:  DGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPP
          LL+G LGL KLAKLL V R GTAHFAGSDSLLTASV+AKMK   K+ P   EGFLYGLP+ I+  RR  V+  P
Subjt:  DGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPP

SwissProt top hitse value%identityAlignment
Q9LXM2 Probable CCR4-associated factor 1 homolog 91.1e-4237.64Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFL-RYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDI---------GITWEFNFRGFDHISD
        REVW+ NL  E EL+ E + ++P +++DTEFPG + +   +  + ++ Y  L+ NV+ LS++Q+GLTL++ NG++         G  WEFNFR FD   D
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFL-RYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDI---------GITWEFNFRGFDHISD

Query:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLP---ICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLG-TIVDLKYMPRFC
             S++  L+ +G DFE+   DG+  E F  L +    +C       W+TFH +YD  YLMK+L  R +  ++  F    + L G  + D+K+M +FC
Subjt:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLP---ICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLG-TIVDLKYMPRFC

Query:  DGLLNGELGLNKLAKLLDVKR-IGTAHFAGSDSLLTASVFAKMKTTFKLP--PEQCEGFLYGL
        +  L G  GL+++A+ L+V R +G  H AGSDSLLT   F +M+  + +   PE+  G LYGL
Subjt:  DGLLNGELGLNKLAKLLDVKR-IGTAHFAGSDSLLTASVFAKMKTTFKLP--PEQCEGFLYGL

Q9S9P2 Probable CCR4-associated factor 1 homolog 26.7e-4337.88Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFL--------RYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDI-------GITWEFNFRGF
        REVW++NL +E+ L+++ + +FP VA+DTEFPG +           P  +  E  YD L+ NVN L ++QLGLTL+++ G++          W+FNFR F
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFL--------RYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDI-------GITWEFNFRGF

Query:  DHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFL--PICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMP
        + ISDM  + S++  L+    D EK    G+  + F  L +   +  + +I  W+TFH  YD  YL+KLL+ + +   ++ F    ++    + D+KY+ 
Subjt:  DHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFL--PICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMP

Query:  RFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL
         FC  L     GL K+A+LL VKR+G +H AGSDSLLT   F KMK  F      +  GFL+GL
Subjt:  RFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 67.2e-4540.23Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDHISD
        REVW+ NL+EE++L+++ + +FP VA+DTEFPG +   P G    + +  Y+ L+ NVN L ++QLGLT +N+ G++          W+FNFR FD  SD
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDHISD

Query:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFC
        +  + S++  LK  G D  K   DGI  + F  L +    SG +      W+TFH  YD  YL+KLL  +++  S   F         T+ D+K++ +FC
Subjt:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFC

Query:  DGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL
        + L     GLNKLA+LL+V+R+G  H AGSDSLLT+  F K+K  F + P  +  G LYGL
Subjt:  DGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL

Q9SHJ0 Probable CCR4-associated factor 1 homolog 18.8e-4336.3Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHISDMEGVSSLDSF
        R VW  N+ EE+  + E L  FP++A DTE+PG +       S +E Y  ++ NV    ++Q G TL N  G+IG  WE NF  F   SD     S++ F
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITWEFNFRGFDHISDMEGVSSLDSF

Query:  LKNKGFDFEKLRNDGIAPEEFTALFLP----ICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGLLNGELGL
        L+  G D +K+R++G+  + F   F P    + RS +   ++TF G+YD AY + +LN   +  +   FA    ++ G + D K M  FC+G L   LGL
Subjt:  LKNKGFDFEKLRNDGIAPEEFTALFLP----ICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDGLLNGELGL

Query:  NKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPPLPPP
        +KLA+LL + R+G AH AGSDSL+TA VF K+K  ++       G +YG       + + +++  P P P
Subjt:  NKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPPLPPP

Q9SKZ2 Probable CCR4-associated factor 1 homolog 73.3e-4238.93Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKG---VSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIG--------ITWEFNFRGFDHIS
        REVW+ NL  E+ L++E + +FP VA+DTEFPG +   P G    + E  Y+ L+ NVN L ++QLGLT +++ G++           W+FNFR FD  S
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKG---VSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIG--------ITWEFNFRGFDHIS

Query:  DMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRF
        D+    S++  L+  G DF K    GI  + F  L +    SG +      W+TFH  YD  YL+KLL  +++  +   F          + D+K++ +F
Subjt:  DMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRF

Query:  CDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKL-PPEQCEGFLYGL
        C+ L     GLNKLA+LLDV+R+G  H AGSDSLLT+  F K++  F +   E+  G LYGL
Subjt:  CDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKL-PPEQCEGFLYGL

Arabidopsis top hitse value%identityAlignment
AT1G15920.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.8e-4437.88Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFL--------RYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDI-------GITWEFNFRGF
        REVW++NL +E+ L+++ + +FP VA+DTEFPG +           P  +  E  YD L+ NVN L ++QLGLTL+++ G++          W+FNFR F
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFL--------RYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDI-------GITWEFNFRGF

Query:  DHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFL--PICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMP
        + ISDM  + S++  L+    D EK    G+  + F  L +   +  + +I  W+TFH  YD  YL+KLL+ + +   ++ F    ++    + D+KY+ 
Subjt:  DHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFL--PICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMP

Query:  RFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL
         FC  L     GL K+A+LL VKR+G +H AGSDSLLT   F KMK  F      +  GFL+GL
Subjt:  RFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL

AT1G15920.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein4.8e-4437.88Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFL--------RYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDI-------GITWEFNFRGF
        REVW++NL +E+ L+++ + +FP VA+DTEFPG +           P  +  E  YD L+ NVN L ++QLGLTL+++ G++          W+FNFR F
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFL--------RYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDI-------GITWEFNFRGF

Query:  DHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFL--PICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMP
        + ISDM  + S++  L+    D EK    G+  + F  L +   +  + +I  W+TFH  YD  YL+KLL+ + +   ++ F    ++    + D+KY+ 
Subjt:  DHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFL--PICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMP

Query:  RFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL
         FC  L     GL K+A+LL VKR+G +H AGSDSLLT   F KMK  F      +  GFL+GL
Subjt:  RFCDGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL

AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.1e-4640.23Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDHISD
        REVW+ NL+EE++L+++ + +FP VA+DTEFPG +   P G    + +  Y+ L+ NVN L ++QLGLT +N+ G++          W+FNFR FD  SD
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDHISD

Query:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFC
        +  + S++  LK  G D  K   DGI  + F  L +    SG +      W+TFH  YD  YL+KLL  +++  S   F         T+ D+K++ +FC
Subjt:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFC

Query:  DGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL
        + L     GLNKLA+LL+V+R+G  H AGSDSLLT+  F K+K  F + P  +  G LYGL
Subjt:  DGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.1e-4640.23Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDHISD
        REVW+ NL+EE++L+++ + +FP VA+DTEFPG +   P G    + +  Y+ L+ NVN L ++QLGLT +N+ G++          W+FNFR FD  SD
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDHISD

Query:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFC
        +  + S++  LK  G D  K   DGI  + F  L +    SG +      W+TFH  YD  YL+KLL  +++  S   F         T+ D+K++ +FC
Subjt:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFC

Query:  DGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL
        + L     GLNKLA+LL+V+R+G  H AGSDSLLT+  F K+K  F + P  +  G LYGL
Subjt:  DGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.1e-4640.23Show/hide
Query:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDHISD
        REVW+ NL+EE++L+++ + +FP VA+DTEFPG +   P G    + +  Y+ L+ NVN L ++QLGLT +N+ G++          W+FNFR FD  SD
Subjt:  REVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGV---SEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIG-------ITWEFNFRGFDHISD

Query:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFC
        +  + S++  LK  G D  K   DGI  + F  L +    SG +      W+TFH  YD  YL+KLL  +++  S   F         T+ D+K++ +FC
Subjt:  MEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRI----DRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFC

Query:  DGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL
        + L     GLNKLA+LL+V+R+G  H AGSDSLLT+  F K+K  F + P  +  G LYGL
Subjt:  DGLLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPP-EQCEGFLYGL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGATCGAACGGGAAAAGGCCTTACAGGAATCGGAGAGTCGTGCCGGAGAAGACGACCGGAGAAGCGCCGATCAGTCTCAGTCACCGGAATCGAGAGGTTTGGTC
TTACAACCTCCGCGAAGAGTTAGAGCTTCTGAAAGAGTATCTCCCAGAATTTCCCATAGTCGCCATCGATACAGAATTTCCAGGGTTTCTCCGATACGCTCCAAAAGGTG
TTTCGGAGGAAGAATTCTACGATTGTCTTCGATTCAATGTGAACCGATTGAGCATACTCCAACTCGGTCTCACACTCACCAACCAGAACGGAGACATCGGAATCACTTGG
GAGTTCAATTTCAGAGGTTTCGATCACATTTCTGATATGGAAGGGGTTTCTTCGCTCGATTCGTTCCTGAAGAACAAGGGCTTCGATTTCGAAAAATTGAGAAATGACGG
AATCGCGCCAGAGGAATTCACTGCCCTGTTTCTTCCGATCTGTCGCAGTGGTCGAATCGATCGATGGATCACCTTCCATGGATCCTACGACATCGCTTACCTCATGAAGC
TTCTCAATGTCAGATCCATGGCGACCTCCATGGCGATTTTCGCAGCCAACGCGCAGCAATTGTTGGGAACGATCGTCGATCTCAAGTACATGCCTCGCTTTTGCGACGGT
TTGCTCAACGGCGAGTTAGGGCTAAATAAACTGGCCAAATTGCTCGACGTTAAGCGAATCGGCACTGCACATTTCGCTGGTTCTGATAGTTTGCTTACGGCTTCTGTTTT
TGCGAAGATGAAGACGACGTTCAAGCTTCCGCCGGAGCAATGTGAGGGGTTTCTGTACGGATTGCCTCACCGGATTCGAGCTCTCCGACGAGTACATGTACTGACTCCGC
CGCTGCCGCCGCCGAAATGCTCGTTATCGTCTTTCGCCAGATCGTCGCCGGTGTTTGTCGGCGATTTTCTTATCGTTAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGATCGAACGGGAAAAGGCCTTACAGGAATCGGAGAGTCGTGCCGGAGAAGACGACCGGAGAAGCGCCGATCAGTCTCAGTCACCGGAATCGAGAGGTTTGGTC
TTACAACCTCCGCGAAGAGTTAGAGCTTCTGAAAGAGTATCTCCCAGAATTTCCCATAGTCGCCATCGATACAGAATTTCCAGGGTTTCTCCGATACGCTCCAAAAGGTG
TTTCGGAGGAAGAATTCTACGATTGTCTTCGATTCAATGTGAACCGATTGAGCATACTCCAACTCGGTCTCACACTCACCAACCAGAACGGAGACATCGGAATCACTTGG
GAGTTCAATTTCAGAGGTTTCGATCACATTTCTGATATGGAAGGGGTTTCTTCGCTCGATTCGTTCCTGAAGAACAAGGGCTTCGATTTCGAAAAATTGAGAAATGACGG
AATCGCGCCAGAGGAATTCACTGCCCTGTTTCTTCCGATCTGTCGCAGTGGTCGAATCGATCGATGGATCACCTTCCATGGATCCTACGACATCGCTTACCTCATGAAGC
TTCTCAATGTCAGATCCATGGCGACCTCCATGGCGATTTTCGCAGCCAACGCGCAGCAATTGTTGGGAACGATCGTCGATCTCAAGTACATGCCTCGCTTTTGCGACGGT
TTGCTCAACGGCGAGTTAGGGCTAAATAAACTGGCCAAATTGCTCGACGTTAAGCGAATCGGCACTGCACATTTCGCTGGTTCTGATAGTTTGCTTACGGCTTCTGTTTT
TGCGAAGATGAAGACGACGTTCAAGCTTCCGCCGGAGCAATGTGAGGGGTTTCTGTACGGATTGCCTCACCGGATTCGAGCTCTCCGACGAGTACATGTACTGACTCCGC
CGCTGCCGCCGCCGAAATGCTCGTTATCGTCTTTCGCCAGATCGTCGCCGGTGTTTGTCGGCGATTTTCTTATCGTTAGTTGA
Protein sequenceShow/hide protein sequence
MKRSNGKRPYRNRRVVPEKTTGEAPISLSHRNREVWSYNLREELELLKEYLPEFPIVAIDTEFPGFLRYAPKGVSEEEFYDCLRFNVNRLSILQLGLTLTNQNGDIGITW
EFNFRGFDHISDMEGVSSLDSFLKNKGFDFEKLRNDGIAPEEFTALFLPICRSGRIDRWITFHGSYDIAYLMKLLNVRSMATSMAIFAANAQQLLGTIVDLKYMPRFCDG
LLNGELGLNKLAKLLDVKRIGTAHFAGSDSLLTASVFAKMKTTFKLPPEQCEGFLYGLPHRIRALRRVHVLTPPLPPPKCSLSSFARSSPVFVGDFLIVS