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Spg038241 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038241
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionAuxin-responsive protein
Genome locationscaffold12:42167615..42177202
RNA-Seq ExpressionSpg038241
SyntenySpg038241
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009734 - auxin-activated signaling pathway (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7011293.1 Auxin-responsive protein IAA11 [Cucurbita argyrosperma subsp. argyrosperma]9.7e-2973.21Show/hide
Query:  AAVISEESTSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSK
        + V+SEES STI +DENV+LS E SSCPDESEIELGLGLSLGVRDS RKIQKV++AQFG+ILTAEDF             +SS+CSSSSL GVNVTNGSK
Subjt:  AAVISEESTSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSK

Query:  RNSDSAATTNGG
        RNSDSAAT NGG
Subjt:  RNSDSAATTNGG

KAG7036289.1 Auxin-responsive protein IAA13 [Cucurbita argyrosperma subsp. argyrosperma]1.1e-2983.5Show/hide
Query:  STISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAATT
        ST+SRDE+VVLS ED S PDESEIELGLGLSLGVRDSA KIQKVAM QFGKIL AEDFP+SISSRSSMSSS+SSVCSSS   G +VTN SK NSDSAATT
Subjt:  STISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAATT

Query:  NGG
        NGG
Subjt:  NGG

XP_022930929.1 auxin-responsive protein IAA13-like [Cucurbita moschata]8.8e-3083.5Show/hide
Query:  STISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAATT
        ST+SRDE+VVLS ED S PDESEIELGLGLSLGVRDSA KIQKVAM QFGKILTAEDFP+SISS SSMSSS+SSVCSSS   G +VTN SK NSDSAATT
Subjt:  STISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAATT

Query:  NGG
        NGG
Subjt:  NGG

XP_023532813.1 auxin-responsive protein IAA13-like [Cucurbita pepo subsp. pepo]3.0e-3083.5Show/hide
Query:  STISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAATT
        ST+SRDE+VVLS ED S PDESEIELGLGLSLGVRDSA KIQKVAM QFGKILTAEDFP+SISS SS+SSS+SSVCSSS  RG +VTN SK NSDSAATT
Subjt:  STISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAATT

Query:  NGG
        NGG
Subjt:  NGG

XP_038888843.1 auxin-responsive protein IAA11-like [Benincasa hispida]1.6e-3184.11Show/hide
Query:  STISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSA-RKIQKVAM-AQFGKILTAEDFPSSISSRSSMSSS--TSSVCSSSSLRGVNVTNGSKRNSDS
        STIS+D+N+VLS EDSSCPDESEIELGLGL LGVRDSA RKIQKV++  QFG+ILTAEDFPSSISS SSMSSS  TSSVCSSSSLRGVNVT+GSKRNSDS
Subjt:  STISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSA-RKIQKVAM-AQFGKILTAEDFPSSISSRSSMSSS--TSSVCSSSSLRGVNVTNGSKRNSDS

Query:  AATTNGG
        A T NGG
Subjt:  AATTNGG

TrEMBL top hitse value%identityAlignment
A0A1S3BHW4 Auxin-responsive protein1.2e-2772.57Show/hide
Query:  VISEESTSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMA--QFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSK
        ++S+ S STIS+D+N+VLS EDSS PDESEIELGLGL LGVRDS R I K +    QF +ILTAEDFPSSI   SS SSSTSSVCSSSSLRGVNVT+GS 
Subjt:  VISEESTSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMA--QFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSK

Query:  RNSDSAATTNGGS
         NSDS+ TTNGGS
Subjt:  RNSDSAATTNGGS

A0A6J1ESV8 Auxin-responsive protein4.2e-3083.5Show/hide
Query:  STISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAATT
        ST+SRDE+VVLS ED S PDESEIELGLGLSLGVRDSA KIQKVAM QFGKILTAEDFP+SISS SSMSSS+SSVCSSS   G +VTN SK NSDSAATT
Subjt:  STISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAATT

Query:  NGG
        NGG
Subjt:  NGG

A0A6J1HKN6 Auxin-responsive protein4.7e-2973.21Show/hide
Query:  AAVISEESTSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSK
        + V+SEES STI +DENV+LS E SSCPDESEIELGLGLSLGVRDS RKIQKV++AQFG+ILTAEDF             +SS+CSSSSL GVNVTNGSK
Subjt:  AAVISEESTSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSK

Query:  RNSDSAATTNGG
        RNSDSAAT NGG
Subjt:  RNSDSAATTNGG

A0A6J1HRM2 Auxin-responsive protein4.7e-2973.21Show/hide
Query:  AAVISEESTSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSK
        + V+SEES STI +DENV+LS E SSCPDESEIELGLGLSLGVRDS RKIQKV++AQFG+ILTAEDF             +SS+CSSSSL GVNVTNGSK
Subjt:  AAVISEESTSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSK

Query:  RNSDSAATTNGG
        RNSDSAAT NGG
Subjt:  RNSDSAATTNGG

A0A6J1JYC5 Auxin-responsive protein6.1e-2981.55Show/hide
Query:  STISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAATT
        ST+SRDE+VVLS ED S PDESEIELGLGLSLGVRDSA KIQKVAM QFGKIL AE+FP+SISS SSMSSS+SSVCSSS   G +VTN SK NSDSAATT
Subjt:  STISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAATT

Query:  NGG
        NGG
Subjt:  NGG

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G04550.1 AUX/IAA transcriptional regulator family protein5.2e-0453.57Show/hide
Query:  SSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSS
        S+ P ESE+ELGLGLSLG           A  + G+ILTA+DFPS  S RS+ SSS
Subjt:  SSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSS

AT1G04550.2 AUX/IAA transcriptional regulator family protein5.2e-0453.57Show/hide
Query:  SSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSS
        S+ P ESE+ELGLGLSLG           A  + G+ILTA+DFPS  S RS+ SSS
Subjt:  SSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSS

AT4G28640.1 indole-3-acetic acid inducible 112.3e-0439.42Show/hide
Query:  STSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAA
        S S +S DEN+V+S EDSS P  +E+ELGL LSLG R   R  +  A                          +SS  SSSSL   +V  G KR +DS A
Subjt:  STSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAA

Query:  TTNG
         T+G
Subjt:  TTNG

AT4G28640.2 indole-3-acetic acid inducible 112.3e-0439.42Show/hide
Query:  STSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAA
        S S +S DEN+V+S EDSS P  +E+ELGL LSLG R   R  +  A                          +SS  SSSSL   +V  G KR +DS A
Subjt:  STSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAA

Query:  TTNG
         T+G
Subjt:  TTNG

AT4G28640.3 indole-3-acetic acid inducible 112.3e-0439.42Show/hide
Query:  STSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAA
        S S +S DEN+V+S EDSS P  +E+ELGL LSLG R   R  +  A                          +SS  SSSSL   +V  G KR +DS A
Subjt:  STSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSDSAA

Query:  TTNG
         T+G
Subjt:  TTNG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTTATTGAACGAGCAGCTGCTGTAATTTCCGAAGAATCCACGTCGACAATCTCCAGAGATGAAAACGTGGTGTTGTCCTATGAGGACTCTTCGTGCCCGGATGAATC
CGAGATCGAATTGGGCCTAGGGCTCAGCCTCGGCGTTCGCGATTCCGCACGCAAGATTCAGAAAGTTGCCATGGCTCAATTCGGGAAAATCTTAACGGCTGAGGATTTCC
CTTCGTCGATCTCTTCTCGTTCGTCGATGTCTTCGTCGACCTCATCTGTGTGTTCCTCGTCGTCGCTTCGTGGAGTCAATGTCACTAACGGCTCGAAGAGAAATTCTGAT
TCTGCAGCTACTACTAATGGCGGCAGTTGCATGTGTTTCTCTGGTTCTGCTTTTTGGTACAATATTGATTCGAATCTCTGGATATTTATTTTGACGAATCTGATACTGAC
AGATATGTTTGCTGTTGCTTCCTTTTATGGTTCTTCTGGTTCCCTCTTCCTCATCCCAAAAGCAAAAACAGTGTTGTTGTTGTGGAGTTCATTGAAACATGGAGATTTAG
TTCCTCTTTCTCAACACATCTTCTTTTATCAGCTCAATCCAATCCTAGCTTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGCTTATTGAACGAGCAGCTGCTGTAATTTCCGAAGAATCCACGTCGACAATCTCCAGAGATGAAAACGTGGTGTTGTCCTATGAGGACTCTTCGTGCCCGGATGAATC
CGAGATCGAATTGGGCCTAGGGCTCAGCCTCGGCGTTCGCGATTCCGCACGCAAGATTCAGAAAGTTGCCATGGCTCAATTCGGGAAAATCTTAACGGCTGAGGATTTCC
CTTCGTCGATCTCTTCTCGTTCGTCGATGTCTTCGTCGACCTCATCTGTGTGTTCCTCGTCGTCGCTTCGTGGAGTCAATGTCACTAACGGCTCGAAGAGAAATTCTGAT
TCTGCAGCTACTACTAATGGCGGCAGTTGCATGTGTTTCTCTGGTTCTGCTTTTTGGTACAATATTGATTCGAATCTCTGGATATTTATTTTGACGAATCTGATACTGAC
AGATATGTTTGCTGTTGCTTCCTTTTATGGTTCTTCTGGTTCCCTCTTCCTCATCCCAAAAGCAAAAACAGTGTTGTTGTTGTGGAGTTCATTGAAACATGGAGATTTAG
TTCCTCTTTCTCAACACATCTTCTTTTATCAGCTCAATCCAATCCTAGCTTACTGA
Protein sequenceShow/hide protein sequence
MLIERAAAVISEESTSTISRDENVVLSYEDSSCPDESEIELGLGLSLGVRDSARKIQKVAMAQFGKILTAEDFPSSISSRSSMSSSTSSVCSSSSLRGVNVTNGSKRNSD
SAATTNGGSCMCFSGSAFWYNIDSNLWIFILTNLILTDMFAVASFYGSSGSLFLIPKAKTVLLLWSSLKHGDLVPLSQHIFFYQLNPILAY