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Spg038262 (gene) of Sponge gourd (cylindrica) v1 genome

Gene IDSpg038262
OrganismLuffa cylindrica (Sponge gourd (cylindrica) v1)
DescriptionFerredoxin
Genome locationscaffold12:40621524..40622966
RNA-Seq ExpressionSpg038262
SyntenySpg038262
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR012675 - Beta-grasp domain superfamily
IPR036010 - 2Fe-2S ferredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606242.1 AP-2 complex subunit mu, partial [Cucurbita argyrosperma subsp. sororia]1.0e-6494.16Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKPESSR FLS NRNRRFSDLLKCRRKT STELQA VDVAG +++GSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK

KAG7011534.1 petF2 [Cucurbita argyrosperma subsp. argyrosperma]2.9e-6491.49Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKP S RRF+S NRN RFSD+LKCRRKTTS ELQAAVDVA  +ENGS SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAISF
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAI F
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAISF

KAG7036183.1 hypothetical protein SDJN02_02984, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-6594.24Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKPESSR FLS NRNRRFSDLLKCRRKT STELQA VDVAG +++GSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAI
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAI
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAI

XP_022155937.1 uncharacterized protein LOC111022934 [Momordica charantia]1.1e-6392.7Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTS RSVN K E SRRFLSPNRNRRFSDLLKCRRKTTSTELQAA+DVAG ++NGSASIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSG+IRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK

XP_022930965.1 uncharacterized protein LOC111437299 [Cucurbita moschata]1.0e-6494.16Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKPESSR FLS NRNRRFSDLLKCRRKT STELQA VDVAG +++GSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK

TrEMBL top hitse value%identityAlignment
A0A6J1DQQ0 Ferredoxin5.4e-6492.7Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTS RSVN K E SRRFLSPNRNRRFSDLLKCRRKTTSTELQAA+DVAG ++NGSASIPTHKVTVHDR+RGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSG+IRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK

A0A6J1ESD7 Ferredoxin4.9e-6594.16Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKPESSR FLS NRNRRFSDLLKCRRKT STELQA VDVAG +++GSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK

A0A6J1GKE0 Ferredoxin4.6e-6391.97Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKP S RRF+S NRN RFSD+LKCRRKTTS ELQAAVDVA  +ENGS SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK

A0A6J1I4R5 Ferredoxin2.3e-6290.51Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLPCTSFRSVNLKP S RRF+S NRN RFSD+LKCRRKTTS ELQAAVDVA  ++NGS SIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELK+K
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK

A0A6J1K5R4 Ferredoxin2.7e-6393.43Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        MDVLLP TSFRSVNLKPESSR FLS NRNRRFSDLLKCR K  STELQAAVDVAG ++NGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
        LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK

SwissProt top hitse value%identityAlignment
P00253 Ferredoxin4.8e-0944.26Show/hide
Query:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE
        T KVT+ +   G  HE  VP+D+YIL  AE +   LPF+CR G C++CA ++ SG + Q +
Subjt:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE

P0A3C7 Ferredoxin-12.2e-0945.9Show/hide
Query:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE
        T KVT+ +   G  HE  VP+D+YIL  AE Q   LPF+CR G C++CA ++ SG + Q +
Subjt:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE

P0A3C8 Ferredoxin-12.2e-0945.9Show/hide
Query:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE
        T KVT+ +   G  HE  VP+D+YIL  AE Q   LPF+CR G C++CA ++ SG + Q +
Subjt:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE

P15788 Ferredoxin3.7e-0944.26Show/hide
Query:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE
        ++KVT+ + E G+     VP+D+YIL  AE + I LP++CR G C++CA +IK G+I Q +
Subjt:  THKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE

Q9C7Y4 Ferredoxin C 2, chloroplastic1.1e-3758.39Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        M ++LPCT   S+  K        +   NRR+    +    T + E +  V+V+ PS+ GS  +P+HKVTVHDR+RGVVHEF VPEDQYILH+AE+Q+IS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
        LPFACRHGCCTSCAVR+KSG++RQP+ALGISAELKS+
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK

Arabidopsis top hitse value%identityAlignment
AT1G10960.1 ferredoxin 11.1e-0538.6Show/hide
Query:  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAISFT
        ED Y+L  AE   + LP++CR G C+SCA ++ SG I Q +   +  E  S+    T
Subjt:  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAISFT

AT1G32550.1 2Fe-2S ferredoxin-like superfamily protein7.8e-3958.39Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        M ++LPCT   S+  K        +   NRR+    +    T + E +  V+V+ PS+ GS  +P+HKVTVHDR+RGVVHEF VPEDQYILH+AE+Q+IS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK
        LPFACRHGCCTSCAVR+KSG++RQP+ALGISAELKS+
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSK

AT1G32550.2 2Fe-2S ferredoxin-like superfamily protein4.3e-3757.14Show/hide
Query:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS
        M ++LPCT   S+  K        +   NRR+    +    T + E +  V+V+ PS+ GS  +P+HKVTVHDR+RGVVHEF   EDQYILH+AE+Q+IS
Subjt:  MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSIS

Query:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIS
        LPFACRHGCCTSCAVR+KSG++RQP+ALGISAELKS+ IS
Subjt:  LPFACRHGCCTSCAVRIKSGQIRQPEALGISAELKSKAIS

AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein4.3e-0543.9Show/hide
Query:  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE
        +D Y+L  AE   I LP++CR G C+SCA ++ SG + Q +
Subjt:  EDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE

AT2G27510.1 ferredoxin 33.5e-0746Show/hide
Query:  GVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE
        G   EF V +DQYIL  AE   + LP++CR G C++CA +I SG + Q +
Subjt:  GVVHEFVVPEDQYILHTAEAQSISLPFACRHGCCTSCAVRIKSGQIRQPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTCTTCTCCCCTGCACTTCCTTCCGTTCCGTAAATCTGAAGCCGGAATCCTCCCGGAGATTCCTCTCGCCTAATCGGAACCGTCGCTTTTCCGACCTCTTGAA
ATGTCGCCGAAAAACGACCTCGACTGAGCTCCAGGCAGCTGTCGACGTCGCCGGCCCGTCCGAAAATGGTTCTGCTTCGATTCCGACTCATAAGGTTACCGTTCACGATA
GAGAGAGAGGCGTTGTTCATGAATTCGTTGTTCCTGAGGATCAATACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCTTTTGCTTGCAGGCACGGTTGTTGC
ACTAGTTGTGCTGTTCGAATAAAATCAGGCCAAATTAGACAGCCTGAAGCCCTGGGAATATCTGCTGAGTTGAAATCAAAGGCAATTTCTTTTACTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTTCTTCTCCCCTGCACTTCCTTCCGTTCCGTAAATCTGAAGCCGGAATCCTCCCGGAGATTCCTCTCGCCTAATCGGAACCGTCGCTTTTCCGACCTCTTGAA
ATGTCGCCGAAAAACGACCTCGACTGAGCTCCAGGCAGCTGTCGACGTCGCCGGCCCGTCCGAAAATGGTTCTGCTTCGATTCCGACTCATAAGGTTACCGTTCACGATA
GAGAGAGAGGCGTTGTTCATGAATTCGTTGTTCCTGAGGATCAATACATATTGCACACTGCCGAAGCTCAGAGCATATCTCTTCCTTTTGCTTGCAGGCACGGTTGTTGC
ACTAGTTGTGCTGTTCGAATAAAATCAGGCCAAATTAGACAGCCTGAAGCCCTGGGAATATCTGCTGAGTTGAAATCAAAGGCAATTTCTTTTACTTGA
Protein sequenceShow/hide protein sequence
MDVLLPCTSFRSVNLKPESSRRFLSPNRNRRFSDLLKCRRKTTSTELQAAVDVAGPSENGSASIPTHKVTVHDRERGVVHEFVVPEDQYILHTAEAQSISLPFACRHGCC
TSCAVRIKSGQIRQPEALGISAELKSKAISFT